| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is phoR
Identifier: 37678908
GI number: 37678908
Start: 727533
End: 728831
Strand: Direct
Name: phoR
Synonym: VV0724
Alternate gene names: 37678908
Gene position: 727533-728831 (Clockwise)
Preceding gene: 37678907
Following gene: 37678909
Centisome position: 21.69
GC content: 47.34
Gene sequence:
>1299_bases GTGGTTGAAAGATTAACTTGGAAAAAGCTGGCATGGGAGCTGGCTTTTTTTTACACCCCCTGGGTAATTGTTGGGTGGAT ATTCGGCTATATGCCGTGGCTGCTTTTGGTGGCGACGGCTTTGCAGCTTGGTTGGCATTTACACAATCAGGTACGTTTGT CTGCGTGGCTCTGGGATGAAAAGCGTTTAACGCCGCCATCGGGCAGTGGTAATTGGGAATCGCTGTTTAATGGCCTTTAT CGCTTGCAGCAAAGACAGCGACGCAAGCGTAAAGAGCTGACGAATTTGATCCGTCGTTTTCGCAATGGTGCAGAATCGTT GCCGGATGCGGTTGTGGTGTTTCGTGCGGAGGGCAACATTGTTTGGTGTAACAAGCTGGCGCAACATCTATTAGGTTTCC ATTGGCCTGAAGATTCTGGTCAGCCTATTTCTAATCTTCTTCGCACTCCTGATTTTATTAAATATCTCTCTGGTAATGAT TTTTCTGAACCGTTGGAAATGAGCTCGCCGCTAAACGTTGAACGTACGCTGGAACTGCGTATTGTTCCTTATACTGAAGG TGAGCACTTGATGGTGGTGCGTGACGTGACGCAGTTGAAACAGCTAGAAGGCATGCGTCGAAACTTTTTTGCTAATGTTT CCCATGAGTTACGTACGCCAATGACAGTGCTTCAGGGTTATCTCGAAATGACCGAAGATCCGGACATGTTGGTTGGCCCC ATGTGGGGCAAAGCCCATCGTGTGATGACGGAACAGCTGAATCGCATGAACAGCTTAGTGAATCAGTTGTTAACCTTATC CAAGATCGAAGCATCGCCAATCCATGAGTTGGATGAAGTGGTTGATGTGCCAGCCATGCTGGAAGTGCTAGAGAAAGAAG CGGTAAGTTTGAGTGGTGATAATCAGCACGCCATCTCTTTTCAAGTGGATAAAGCGCTCAAAGTCTATGCCGATGAAGAT CAACTGCGCAGTGCTATTTCGAACCTAGTATACAATGCCGTGAAGTACACACCTGCTGGTGCAAACGTACAGGTTCGCTG GTATCGCAATAGCAAGGGTGCTTGCCTAGAAGTGGAAGACAGTGGTGATGGTATTGAACCGCAACATATCCATCGTCTGA CAGAGCGTTTTTATCGCGTTGACAAAGCACGCTCTCGTGACACCGGGGGCAGTGGTTTAGGTCTGGCGATTGTAAAACAT GCTTTGACTCATCACGACACTCATTTGGATATCCAAAGTAAAGTGGGCAGTGGCAGTAAGTTTTCATTTGTTTTACCGGC AAAATTGGTGGCGAAATGA
Upstream 100 bases:
>100_bases AAGCGCTAGAAGATGCAGGGCATGATAAACTGATTCAAACAGTGCGAGGCGCGGGCTATCGTTTCTCAACGAAAGCGTAA ATACCATGTCGGAGTCGTGA
Downstream 100 bases:
>100_bases AACGATGGTGGTTGAGTTTATTGTTGATGGGGGGAATAAGTGCGAGTGCTCAGGCATTGGATACACCATTGCAACCTTAT AAAAAAATCCCCGGTGTTTC
Product: phosphate regulon sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MVERLTWKKLAWELAFFYTPWVIVGWIFGYMPWLLLVATALQLGWHLHNQVRLSAWLWDEKRLTPPSGSGNWESLFNGLY RLQQRQRRKRKELTNLIRRFRNGAESLPDAVVVFRAEGNIVWCNKLAQHLLGFHWPEDSGQPISNLLRTPDFIKYLSGND FSEPLEMSSPLNVERTLELRIVPYTEGEHLMVVRDVTQLKQLEGMRRNFFANVSHELRTPMTVLQGYLEMTEDPDMLVGP MWGKAHRVMTEQLNRMNSLVNQLLTLSKIEASPIHELDEVVDVPAMLEVLEKEAVSLSGDNQHAISFQVDKALKVYADED QLRSAISNLVYNAVKYTPAGANVQVRWYRNSKGACLEVEDSGDGIEPQHIHRLTERFYRVDKARSRDTGGSGLGLAIVKH ALTHHDTHLDIQSKVGSGSKFSFVLPAKLVAK
Sequences:
>Translated_432_residues MVERLTWKKLAWELAFFYTPWVIVGWIFGYMPWLLLVATALQLGWHLHNQVRLSAWLWDEKRLTPPSGSGNWESLFNGLY RLQQRQRRKRKELTNLIRRFRNGAESLPDAVVVFRAEGNIVWCNKLAQHLLGFHWPEDSGQPISNLLRTPDFIKYLSGND FSEPLEMSSPLNVERTLELRIVPYTEGEHLMVVRDVTQLKQLEGMRRNFFANVSHELRTPMTVLQGYLEMTEDPDMLVGP MWGKAHRVMTEQLNRMNSLVNQLLTLSKIEASPIHELDEVVDVPAMLEVLEKEAVSLSGDNQHAISFQVDKALKVYADED QLRSAISNLVYNAVKYTPAGANVQVRWYRNSKGACLEVEDSGDGIEPQHIHRLTERFYRVDKARSRDTGGSGLGLAIVKH ALTHHDTHLDIQSKVGSGSKFSFVLPAKLVAK >Mature_432_residues MVERLTWKKLAWELAFFYTPWVIVGWIFGYMPWLLLVATALQLGWHLHNQVRLSAWLWDEKRLTPPSGSGNWESLFNGLY RLQQRQRRKRKELTNLIRRFRNGAESLPDAVVVFRAEGNIVWCNKLAQHLLGFHWPEDSGQPISNLLRTPDFIKYLSGND FSEPLEMSSPLNVERTLELRIVPYTEGEHLMVVRDVTQLKQLEGMRRNFFANVSHELRTPMTVLQGYLEMTEDPDMLVGP MWGKAHRVMTEQLNRMNSLVNQLLTLSKIEASPIHELDEVVDVPAMLEVLEKEAVSLSGDNQHAISFQVDKALKVYADED QLRSAISNLVYNAVKYTPAGANVQVRWYRNSKGACLEVEDSGDGIEPQHIHRLTERFYRVDKARSRDTGGSGLGLAIVKH ALTHHDTHLDIQSKVGSGSKFSFVLPAKLVAK
Specific function: Member of the two-component regulatory system phoR/phoB involved in the phosphate regulon genes expression. PhoR may function as a membrane-associated protein kinase that phosphorylates phoB in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=433, Percent_Identity=60.0461893764434, Blast_Score=509, Evalue=1e-145, Organism=Escherichia coli, GI1788393, Length=251, Percent_Identity=29.4820717131474, Blast_Score=118, Evalue=7e-28, Organism=Escherichia coli, GI1786783, Length=273, Percent_Identity=31.8681318681319, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1788549, Length=365, Percent_Identity=24.9315068493151, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1790346, Length=222, Percent_Identity=30.1801801801802, Blast_Score=92, Evalue=9e-20, Organism=Escherichia coli, GI1788713, Length=405, Percent_Identity=23.7037037037037, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1789149, Length=230, Percent_Identity=28.2608695652174, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI48994928, Length=275, Percent_Identity=27.6363636363636, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI145693157, Length=341, Percent_Identity=25.2199413489736, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1790436, Length=230, Percent_Identity=26.5217391304348, Blast_Score=82, Evalue=9e-17, Organism=Escherichia coli, GI1787894, Length=231, Percent_Identity=27.2727272727273, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1789808, Length=249, Percent_Identity=28.5140562248996, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1790551, Length=219, Percent_Identity=29.6803652968037, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1786912, Length=232, Percent_Identity=28.8793103448276, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1788279, Length=261, Percent_Identity=26.4367816091954, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI87082128, Length=230, Percent_Identity=26.0869565217391, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1789403, Length=231, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI87081816, Length=226, Percent_Identity=27.8761061946903, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1790861, Length=193, Percent_Identity=29.5336787564767, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR021766 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR014310 [H]
Pfam domain/function: PF11808 DUF3329; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49418; Mature: 49418
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVERLTWKKLAWELAFFYTPWVIVGWIFGYMPWLLLVATALQLGWHLHNQVRLSAWLWDE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECC KRLTPPSGSGNWESLFNGLYRLQQRQRRKRKELTNLIRRFRNGAESLPDAVVVFRAEGNI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEEEECCCCE VWCNKLAQHLLGFHWPEDSGQPISNLLRTPDFIKYLSGNDFSEPLEMSSPLNVERTLELR EEHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEE IVPYTEGEHLMVVRDVTQLKQLEGMRRNFFANVSHELRTPMTVLQGYLEMTEDPDMLVGP EEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCCCCEEEEC MWGKAHRVMTEQLNRMNSLVNQLLTLSKIEASPIHELDEVVDVPAMLEVLEKEAVSLSGD CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCC NQHAISFQVDKALKVYADEDQLRSAISNLVYNAVKYTPAGANVQVRWYRNSKGACLEVED CCEEEEEEECCHHHEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEC SGDGIEPQHIHRLTERFYRVDKARSRDTGGSGLGLAIVKHALTHHDTHLDIQSKVGSGSK CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHCCCCCC FSFVLPAKLVAK EEEECCHHHHCC >Mature Secondary Structure MVERLTWKKLAWELAFFYTPWVIVGWIFGYMPWLLLVATALQLGWHLHNQVRLSAWLWDE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECC KRLTPPSGSGNWESLFNGLYRLQQRQRRKRKELTNLIRRFRNGAESLPDAVVVFRAEGNI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEEEECCCCE VWCNKLAQHLLGFHWPEDSGQPISNLLRTPDFIKYLSGNDFSEPLEMSSPLNVERTLELR EEHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEE IVPYTEGEHLMVVRDVTQLKQLEGMRRNFFANVSHELRTPMTVLQGYLEMTEDPDMLVGP EEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCCCCEEEEC MWGKAHRVMTEQLNRMNSLVNQLLTLSKIEASPIHELDEVVDVPAMLEVLEKEAVSLSGD CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCC NQHAISFQVDKALKVYADEDQLRSAISNLVYNAVKYTPAGANVQVRWYRNSKGACLEVED CCEEEEEEECCHHHEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEC SGDGIEPQHIHRLTERFYRVDKARSRDTGGSGLGLAIVKHALTHHDTHLDIQSKVGSGSK CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHCCCCCC FSFVLPAKLVAK EEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3550103; 9278503; 2187152; 8391104 [H]