| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is lgt [H]
Identifier: 37678862
GI number: 37678862
Start: 676103
End: 676918
Strand: Direct
Name: lgt [H]
Synonym: VV0678
Alternate gene names: 37678862
Gene position: 676103-676918 (Clockwise)
Preceding gene: 37678861
Following gene: 37678863
Centisome position: 20.16
GC content: 50.12
Gene sequence:
>816_bases ATGTCTCAGGGTTACCTGCCTTTTCCTAATATCGACCCCGTCTTTTTCTCGATAGGACCCATCTCAGTTCGTTGGTACGG GTTGATGTATCTATTTGGTTTTTTGTTTGCGATGTGGCTCGCCAATCGCCGAGCAGACAAACCGGGCAGTGGCTGGACGC GAGAGCAAGTTTCGGATTTGCTGTTCGCTGGATTCCTAGGCGTTGTGCTGGGTGGTCGCATTGGGTACGTGCTGTTCTAT AACTTCGATCTCTTCCTCGCCGATCCGATTTACCTCTTTAAAGTCTGGACAGGTGGCATGTCTTTCCATGGCGGCTTGCT GGGTGTCATTACGGCTATGCTCTGGTACGCGAAGAAAAATGGCCGAACCTTTTTTGGCGTGGCGGACTTCGTTGCTCCGT TAGTGCCATTTGGTTTAGGGGTAGGGCGCTTAGGCAACTTTATGAACGGCGAACTTTGGGGCAGAGTGACCGATGTGCCT TGGGCGATGGTGTTCCCAACCGGCGGACCACTACCACGCCACCCTTCGCAATTGTATGAGATGGCATTAGAAGGGGTGTT GCTGTTCTTTATCCTCAACTGGTTTATTCGCAAACCAAGACCTTTAGGATCCGTATCTGGTTTATTCCTTGCTGGTTATG GTACATTCCGTTTCCTCGTTGAATACGTGCGTGAACCGGATGCGCAACTGGGTCTGTTTGGTGGTTTCATTTCAATGGGA CAGATCTTGTCGTCACCGATGATTATTGGTGGATTGGCGCTGATGGCTTGGGCTTATAAACGTGGCCACTATCAAGACAA AGTAACCGTGAAGTAA
Upstream 100 bases:
>100_bases AAAGCTGAAAAAAATCTTTGCGTTATTTTTAATGTTTGTCGCGCTCAGCATGTTAGTCTAGCCGCGTTATTTCAAAGTTG ATGATTAAGAGTACTTCATT
Downstream 100 bases:
>100_bases GGAATTGAAGTGAAACAATATTTAGAATTGTGCCGTCGCATCGTTGATGAAGGGCACTGGGTTGAAAATGAACGTACCGG TAAGCGCTGCCTTACTGTGA
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MSQGYLPFPNIDPVFFSIGPISVRWYGLMYLFGFLFAMWLANRRADKPGSGWTREQVSDLLFAGFLGVVLGGRIGYVLFY NFDLFLADPIYLFKVWTGGMSFHGGLLGVITAMLWYAKKNGRTFFGVADFVAPLVPFGLGVGRLGNFMNGELWGRVTDVP WAMVFPTGGPLPRHPSQLYEMALEGVLLFFILNWFIRKPRPLGSVSGLFLAGYGTFRFLVEYVREPDAQLGLFGGFISMG QILSSPMIIGGLALMAWAYKRGHYQDKVTVK
Sequences:
>Translated_271_residues MSQGYLPFPNIDPVFFSIGPISVRWYGLMYLFGFLFAMWLANRRADKPGSGWTREQVSDLLFAGFLGVVLGGRIGYVLFY NFDLFLADPIYLFKVWTGGMSFHGGLLGVITAMLWYAKKNGRTFFGVADFVAPLVPFGLGVGRLGNFMNGELWGRVTDVP WAMVFPTGGPLPRHPSQLYEMALEGVLLFFILNWFIRKPRPLGSVSGLFLAGYGTFRFLVEYVREPDAQLGLFGGFISMG QILSSPMIIGGLALMAWAYKRGHYQDKVTVK >Mature_270_residues SQGYLPFPNIDPVFFSIGPISVRWYGLMYLFGFLFAMWLANRRADKPGSGWTREQVSDLLFAGFLGVVLGGRIGYVLFYN FDLFLADPIYLFKVWTGGMSFHGGLLGVITAMLWYAKKNGRTFFGVADFVAPLVPFGLGVGRLGNFMNGELWGRVTDVPW AMVFPTGGPLPRHPSQLYEMALEGVLLFFILNWFIRKPRPLGSVSGLFLAGYGTFRFLVEYVREPDAQLGLFGGFISMGQ ILSSPMIIGGLALMAWAYKRGHYQDKVTVK
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
Organism=Escherichia coli, GI1789192, Length=289, Percent_Identity=62.2837370242215, Blast_Score=358, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 30281; Mature: 30150
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQGYLPFPNIDPVFFSIGPISVRWYGLMYLFGFLFAMWLANRRADKPGSGWTREQVSDL CCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LFAGFLGVVLGGRIGYVLFYNFDLFLADPIYLFKVWTGGMSFHGGLLGVITAMLWYAKKN HHHHHHHHHHCCCEEEEEEEECCHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCC GRTFFGVADFVAPLVPFGLGVGRLGNFMNGELWGRVTDVPWAMVFPTGGPLPRHPSQLYE CCEEEEHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEECCCEEEEECCCCCCCCCHHHHHH MALEGVLLFFILNWFIRKPRPLGSVSGLFLAGYGTFRFLVEYVREPDAQLGLFGGFISMG HHHHHHHHHHHHHHHHCCCCCCCCCCCHHEECHHHHHHHHHHHHCCCCHHHHHHHHHHHH QILSSPMIIGGLALMAWAYKRGHYQDKVTVK HHHCCCHHHHHHHHHHHHHHCCCCCCCEECC >Mature Secondary Structure SQGYLPFPNIDPVFFSIGPISVRWYGLMYLFGFLFAMWLANRRADKPGSGWTREQVSDL CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LFAGFLGVVLGGRIGYVLFYNFDLFLADPIYLFKVWTGGMSFHGGLLGVITAMLWYAKKN HHHHHHHHHHCCCEEEEEEEECCHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCC GRTFFGVADFVAPLVPFGLGVGRLGNFMNGELWGRVTDVPWAMVFPTGGPLPRHPSQLYE CCEEEEHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEECCCEEEEECCCCCCCCCHHHHHH MALEGVLLFFILNWFIRKPRPLGSVSGLFLAGYGTFRFLVEYVREPDAQLGLFGGFISMG HHHHHHHHHHHHHHHHCCCCCCCCCCCHHEECHHHHHHHHHHHHCCCCHHHHHHHHHHHH QILSSPMIIGGLALMAWAYKRGHYQDKVTVK HHHCCCHHHHHHHHHHHHHHCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA