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The map label for this gene is recJ [H]

Identifier: 37678851

GI number: 37678851

Start: 662773

End: 664512

Strand: Direct

Name: recJ [H]

Synonym: VV0667

Alternate gene names: 37678851

Gene position: 662773-664512 (Clockwise)

Preceding gene: 37678850

Following gene: 37678852

Centisome position: 19.76

GC content: 50.8

Gene sequence:

>1740_bases
ATGATAGAAATACAACGACGACCAGAACCCGATCTTTCCCTCTTGCCCGACAGTGTGCCGGATATCCTCAAACGCATCTA
TCTCAACCGTGGTATTCAAGACATAAGCCAGTTGGAAACCGCCGTCAAAGGGTTGCATTCATACCAAAAACTGCACGGAA
TTGAACTTGCCGTTGCGCTGCTTTTTGAGGCTATACGTGAGCAGAAGCGCATTATTGTGGTCGGGGATTTTGATGCTGAT
GGCGCGACCAGCTCGGCACTCTCGGTCCTTGCACTGCGCATGCTTGGCAGCAACAATGTCGACTACTTAGTACCAAACCG
CTTTGAAGATGGCTATGGTTTGAGCCCTGAAGTGGTCGAGCAGGCTATCGCCTTGGGCGCTGAAGTGATCATGACCGTGG
ATAACGGCGTCTCCTCCATTGAAGGGGTGCGTTATGCCAAAGAGCATGGCTTAAAAGTGTTGGTGACCGATCACCATTTG
CCCGGGCAAGTGTTGCCTGAGGTAGATGCGATGGTCAATCCAAACTTACAGACCTGCGCGTTTCCTTCCAAAGCACTGGC
TGGGGTTGGCGTGGCTTTTTATCTGATGATGGCCTTGTGTGTCCACATGCGTCAATGCGGTTGGTTTGCCGAGCAAGGTA
TGGCAGAGCCGAAGCTGATGGAGCTGGTGGATTTGGTGGCCTTAGGCACCGTTGCGGATGTTGTTCCGCTGGATGAGAAC
AACCGCATTTTGGTGCACCAAGGTCTACAGCGCATTCGCGCCGGGAAAGCGCGTCCGGGTATTCAAGCCTTGATTGAAGT
GGCCAAGCGCGATGCTCGTCGTTTGGTGGCGGCAGATTTCGGTTTTGCACTGGGCCCGCGCATCAATGCCGCAGGACGTT
TGGATGACATGTCGTTTGGGGTTGAATTGCTGATGTGCAACAACATCCACGCGGCGCGTCGTATGGCGCATGAACTGGAC
GGGCTCAATCAAACTCGTAAAGAAATTGAAGAGGGCATGAAGCAAGAGGCAATGGCGTTTTGTGAACGTCTGCAGTTTGG
CGAAAACAGCGAGTTGCCTTATGGTTTGGCTCTTTTCCAGCGTGATTGGCATCAGGGCGTGATTGGCATTCTAGCGTCGA
GAATCAAAGAGAAATATCATCGTCCGGTGATTGCATTTGCCGATGGTGGCGATGGGTATATCAAAGGATCTTGTCGCTCT
ATTCCTGGCCTACACATGCGCGATGCGCTGGATTTGATTGATACACAAAATCCCGGCTTGATCCTCAAATTTGGTGGTCA
CGCGATGGCGGCTGGCTTGACCATCAAAGAGTGCGATTTTGAACGATTTAGTCAGCTGTTTGATCAACTGGTGAAACGCG
AATTGGATGAAGCCGCACTGAAAGGTATTGTGCTTTCTGATGGCGAACTCAAGCCTGAAGAGTTTTCCATGCATACAGCG
GAGCTGCTGCGATCTGCGGGGCCTTGGGGGCAGGCATTTCCAGAGCCCATTTTTGATGGCGAATTTAAAGTGCTGCACCA
GAAATTGGTCGGCGAAAAACATCTAAAATTGATGCTTGAGCCTTTATTCAAAGGCTATCCAACCAACATCATGATTGACG
GGATCGCCTTCAACGTCGATTTACGTCGCTGGCCAGATGCCTCGGTGAAAACCGTTCGCCTTGCCTACAAACTGGATATC
AATGAGTTTCGCAACAATCAATCGTTGCAATTGATGATTGAACACATCGAGGCTCGATAA

Upstream 100 bases:

>100_bases
TGGTTACTTGCCACCAGAAAAACTGCTAGAACGTTTACAGCAACCATAAACCTTCAAGGAGCAGAGCCTGCGCGTTTGAC
CCGCGGGCTCTATTCAATTA

Downstream 100 bases:

>100_bases
CCGCCATTAAAGGAGTGAGAACGAATCTCGCTCCTTTTTTCTCTTCAGGATTCGACAAATTTCCTCCCAATTTTTCCTGT
ATCTCTGTCACATTTTTGAG

Product: ssDNA exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MIEIQRRPEPDLSLLPDSVPDILKRIYLNRGIQDISQLETAVKGLHSYQKLHGIELAVALLFEAIREQKRIIVVGDFDAD
GATSSALSVLALRMLGSNNVDYLVPNRFEDGYGLSPEVVEQAIALGAEVIMTVDNGVSSIEGVRYAKEHGLKVLVTDHHL
PGQVLPEVDAMVNPNLQTCAFPSKALAGVGVAFYLMMALCVHMRQCGWFAEQGMAEPKLMELVDLVALGTVADVVPLDEN
NRILVHQGLQRIRAGKARPGIQALIEVAKRDARRLVAADFGFALGPRINAAGRLDDMSFGVELLMCNNIHAARRMAHELD
GLNQTRKEIEEGMKQEAMAFCERLQFGENSELPYGLALFQRDWHQGVIGILASRIKEKYHRPVIAFADGGDGYIKGSCRS
IPGLHMRDALDLIDTQNPGLILKFGGHAMAAGLTIKECDFERFSQLFDQLVKRELDEAALKGIVLSDGELKPEEFSMHTA
ELLRSAGPWGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLFKGYPTNIMIDGIAFNVDLRRWPDASVKTVRLAYKLDI
NEFRNNQSLQLMIEHIEAR

Sequences:

>Translated_579_residues
MIEIQRRPEPDLSLLPDSVPDILKRIYLNRGIQDISQLETAVKGLHSYQKLHGIELAVALLFEAIREQKRIIVVGDFDAD
GATSSALSVLALRMLGSNNVDYLVPNRFEDGYGLSPEVVEQAIALGAEVIMTVDNGVSSIEGVRYAKEHGLKVLVTDHHL
PGQVLPEVDAMVNPNLQTCAFPSKALAGVGVAFYLMMALCVHMRQCGWFAEQGMAEPKLMELVDLVALGTVADVVPLDEN
NRILVHQGLQRIRAGKARPGIQALIEVAKRDARRLVAADFGFALGPRINAAGRLDDMSFGVELLMCNNIHAARRMAHELD
GLNQTRKEIEEGMKQEAMAFCERLQFGENSELPYGLALFQRDWHQGVIGILASRIKEKYHRPVIAFADGGDGYIKGSCRS
IPGLHMRDALDLIDTQNPGLILKFGGHAMAAGLTIKECDFERFSQLFDQLVKRELDEAALKGIVLSDGELKPEEFSMHTA
ELLRSAGPWGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLFKGYPTNIMIDGIAFNVDLRRWPDASVKTVRLAYKLDI
NEFRNNQSLQLMIEHIEAR
>Mature_579_residues
MIEIQRRPEPDLSLLPDSVPDILKRIYLNRGIQDISQLETAVKGLHSYQKLHGIELAVALLFEAIREQKRIIVVGDFDAD
GATSSALSVLALRMLGSNNVDYLVPNRFEDGYGLSPEVVEQAIALGAEVIMTVDNGVSSIEGVRYAKEHGLKVLVTDHHL
PGQVLPEVDAMVNPNLQTCAFPSKALAGVGVAFYLMMALCVHMRQCGWFAEQGMAEPKLMELVDLVALGTVADVVPLDEN
NRILVHQGLQRIRAGKARPGIQALIEVAKRDARRLVAADFGFALGPRINAAGRLDDMSFGVELLMCNNIHAARRMAHELD
GLNQTRKEIEEGMKQEAMAFCERLQFGENSELPYGLALFQRDWHQGVIGILASRIKEKYHRPVIAFADGGDGYIKGSCRS
IPGLHMRDALDLIDTQNPGLILKFGGHAMAAGLTIKECDFERFSQLFDQLVKRELDEAALKGIVLSDGELKPEEFSMHTA
ELLRSAGPWGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLFKGYPTNIMIDGIAFNVDLRRWPDASVKTVRLAYKLDI
NEFRNNQSLQLMIEHIEAR

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=575, Percent_Identity=62.6086956521739, Blast_Score=740, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 64324; Mature: 64324

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEIQRRPEPDLSLLPDSVPDILKRIYLNRGIQDISQLETAVKGLHSYQKLHGIELAVAL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFEAIREQKRIIVVGDFDADGATSSALSVLALRMLGSNNVDYLVPNRFEDGYGLSPEVVE
HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHH
QAIALGAEVIMTVDNGVSSIEGVRYAKEHGLKVLVTDHHLPGQVLPEVDAMVNPNLQTCA
HHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCCCHHHC
FPSKALAGVGVAFYLMMALCVHMRQCGWFAEQGMAEPKLMELVDLVALGTVADVVPLDEN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCC
NRILVHQGLQRIRAGKARPGIQALIEVAKRDARRLVAADFGFALGPRINAAGRLDDMSFG
CEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHC
VELLMCNNIHAARRMAHELDGLNQTRKEIEEGMKQEAMAFCERLQFGENSELPYGLALFQ
EEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
RDWHQGVIGILASRIKEKYHRPVIAFADGGDGYIKGSCRSIPGLHMRDALDLIDTQNPGL
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCE
ILKFGGHAMAAGLTIKECDFERFSQLFDQLVKRELDEAALKGIVLSDGELKPEEFSMHTA
EEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHH
ELLRSAGPWGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLFKGYPTNIMIDGIAFNVD
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEEEEEEEE
LRRWPDASVKTVRLAYKLDINEFRNNQSLQLMIEHIEAR
CCCCCCCCCEEEEEEEEEEHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MIEIQRRPEPDLSLLPDSVPDILKRIYLNRGIQDISQLETAVKGLHSYQKLHGIELAVAL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFEAIREQKRIIVVGDFDADGATSSALSVLALRMLGSNNVDYLVPNRFEDGYGLSPEVVE
HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHH
QAIALGAEVIMTVDNGVSSIEGVRYAKEHGLKVLVTDHHLPGQVLPEVDAMVNPNLQTCA
HHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCCCHHHC
FPSKALAGVGVAFYLMMALCVHMRQCGWFAEQGMAEPKLMELVDLVALGTVADVVPLDEN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCC
NRILVHQGLQRIRAGKARPGIQALIEVAKRDARRLVAADFGFALGPRINAAGRLDDMSFG
CEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHC
VELLMCNNIHAARRMAHELDGLNQTRKEIEEGMKQEAMAFCERLQFGENSELPYGLALFQ
EEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
RDWHQGVIGILASRIKEKYHRPVIAFADGGDGYIKGSCRSIPGLHMRDALDLIDTQNPGL
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCE
ILKFGGHAMAAGLTIKECDFERFSQLFDQLVKRELDEAALKGIVLSDGELKPEEFSMHTA
EEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHH
ELLRSAGPWGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLFKGYPTNIMIDGIAFNVD
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEEEEEEEE
LRRWPDASVKTVRLAYKLDINEFRNNQSLQLMIEHIEAR
CCCCCCCCCEEEEEEEEEEHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]