Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37678728

Identifier: 37678728

GI number: 37678728

Start: 531291

End: 532778

Strand: Direct

Name: 37678728

Synonym: VV0544

Alternate gene names: NA

Gene position: 531291-532778 (Clockwise)

Preceding gene: 37678727

Following gene: 37678731

Centisome position: 15.84

GC content: 42.81

Gene sequence:

>1488_bases
ATGACAAAATTTATTCAAGCATCAGAGCGCCCATATATCCCATGTGAGCATCCTGATTTAAACCAGTATTTGCAGCTTTT
CAAACAGAACCTTATTCGTTGCAAGCTCAAGCGTCGGGGTTTTGTTGATTTGGATGAGCAGATTATTGCTGTTTTTAAAC
AAAACACAGAGCTAAAAGTACAATGTGAAGCTCTGGTTGATTATGTCGCCGAAGCTTTTGAACATTATGCGGTGTGGGAT
TACAGTCATGCCTATTATCCTGGGGTATCAAGTCAGCAAACGGCTCGATTAGACGCTATGGAGGGCAGCAGTCGTGTGCT
CCCAACGCTTGCTGCGTGGTTGCATGCCAATCCCAATACTGCTTTGAAAAGTTCGACACTAAGTGAAGCACAATTCAATT
TGGTTGATTGGATTAAGTGCGCATTTCTTGCGGGCACCAACCCCCATCATTCTGGCTATTGGGGAAATATCGAAGACTAT
GATCAAAGGATCTGTGAAAGTGCTGACTTGGCATTAGCATTATGGCTAAGTAAAGAGCAAGTATGGCAAACATTGGCTTC
GGATGAGCAACAACAGATCGTTACTTGGTTTACTCAGGTCAATCATGTTGAAACCGTGGACAATAATTGGCACCTTTTTC
CACTAACGGTTCAATTGGTAATGAAAGATTTGACCGGTGAAGATCATGTTGAGCATCATCGTTACGCACGCGTGAAAGAG
TTTTTTGTTGGTGATGGTTGGTTTCGCGATGGGGCAAAAGGCAATTATGATTATTACAATGCTTGGGGTTTTCACTATTC
ACTTTATTGGTTAGCGCAAATTGATCCTGAGTTTGACCCACATTTTATTCGCCATAGCTTAAGAACGTTTAGCGACAAAT
ATCGCTACTTTTTTACACCGCAAGGCTTCCCTTTATTTGGGCGCAGTGCGTGTTATCGTTTATCTGCTACCGCCCCTTTA
ATTGCCACTCTTGATGTGTGTGGAGCCAATTTACCCAACGAATATCTCGGGCAGTTTAAACGCGCATTCAAAACCAACCT
CTGCTACTTTATCTCCAATGGGGCACTACAAAAAGGACGTCCGACGCAAGGCTTGTTTGCCGATGATATTCGTCTTACAG
ACAACTATAGTGGTCCGGCAAGCAGCTTTTGGTCTTTAAGAGCACTAAACATCGCCTTATTCTGTGGTGACAGAATTGGC
TTATGGGAAGCGAAGGAGCAGCCGTTAGAAATCGAAAAAGAGAGTTTTATGTTCTCTTTAAATGGTCCCAATATGTTGGT
GGTTGGGATTCAAGAAACGCAAGAAGTGAATGTGATCTTTAAGAATGATTACATTAAGGAGCAAACGCCGCAATCGAGAA
AACTTGCGTCACAATCGATACTTAAAAAGTGGCAGGAGAGGTTGGTTGGTCGTGCAGAGCGACCGAAAAACAATCTATTA
CGCAAAGGTGTCACAAGCTATAGTTCGAAGCTATTTCACTTCTTCTAG

Upstream 100 bases:

>100_bases
CTAATCAGCGTCAGTACTTTAAAAGACAAGACCAATTAATTTGATTGGTCTTTGTGTTTCTATACGGTGTGCTTTTTTAG
GCGCGCTATCCGGAGGCGAA

Downstream 100 bases:

>100_bases
CTATTGATTAGATGCTCGGTTGTTTTGCAACTAGATACTCTATTTTGGCTTCTATGCGGTAATGGAGATCTAGTTGCTGG
CTTTCTTGCCGTGATACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MTKFIQASERPYIPCEHPDLNQYLQLFKQNLIRCKLKRRGFVDLDEQIIAVFKQNTELKVQCEALVDYVAEAFEHYAVWD
YSHAYYPGVSSQQTARLDAMEGSSRVLPTLAAWLHANPNTALKSSTLSEAQFNLVDWIKCAFLAGTNPHHSGYWGNIEDY
DQRICESADLALALWLSKEQVWQTLASDEQQQIVTWFTQVNHVETVDNNWHLFPLTVQLVMKDLTGEDHVEHHRYARVKE
FFVGDGWFRDGAKGNYDYYNAWGFHYSLYWLAQIDPEFDPHFIRHSLRTFSDKYRYFFTPQGFPLFGRSACYRLSATAPL
IATLDVCGANLPNEYLGQFKRAFKTNLCYFISNGALQKGRPTQGLFADDIRLTDNYSGPASSFWSLRALNIALFCGDRIG
LWEAKEQPLEIEKESFMFSLNGPNMLVVGIQETQEVNVIFKNDYIKEQTPQSRKLASQSILKKWQERLVGRAERPKNNLL
RKGVTSYSSKLFHFF

Sequences:

>Translated_495_residues
MTKFIQASERPYIPCEHPDLNQYLQLFKQNLIRCKLKRRGFVDLDEQIIAVFKQNTELKVQCEALVDYVAEAFEHYAVWD
YSHAYYPGVSSQQTARLDAMEGSSRVLPTLAAWLHANPNTALKSSTLSEAQFNLVDWIKCAFLAGTNPHHSGYWGNIEDY
DQRICESADLALALWLSKEQVWQTLASDEQQQIVTWFTQVNHVETVDNNWHLFPLTVQLVMKDLTGEDHVEHHRYARVKE
FFVGDGWFRDGAKGNYDYYNAWGFHYSLYWLAQIDPEFDPHFIRHSLRTFSDKYRYFFTPQGFPLFGRSACYRLSATAPL
IATLDVCGANLPNEYLGQFKRAFKTNLCYFISNGALQKGRPTQGLFADDIRLTDNYSGPASSFWSLRALNIALFCGDRIG
LWEAKEQPLEIEKESFMFSLNGPNMLVVGIQETQEVNVIFKNDYIKEQTPQSRKLASQSILKKWQERLVGRAERPKNNLL
RKGVTSYSSKLFHFF
>Mature_494_residues
TKFIQASERPYIPCEHPDLNQYLQLFKQNLIRCKLKRRGFVDLDEQIIAVFKQNTELKVQCEALVDYVAEAFEHYAVWDY
SHAYYPGVSSQQTARLDAMEGSSRVLPTLAAWLHANPNTALKSSTLSEAQFNLVDWIKCAFLAGTNPHHSGYWGNIEDYD
QRICESADLALALWLSKEQVWQTLASDEQQQIVTWFTQVNHVETVDNNWHLFPLTVQLVMKDLTGEDHVEHHRYARVKEF
FVGDGWFRDGAKGNYDYYNAWGFHYSLYWLAQIDPEFDPHFIRHSLRTFSDKYRYFFTPQGFPLFGRSACYRLSATAPLI
ATLDVCGANLPNEYLGQFKRAFKTNLCYFISNGALQKGRPTQGLFADDIRLTDNYSGPASSFWSLRALNIALFCGDRIGL
WEAKEQPLEIEKESFMFSLNGPNMLVVGIQETQEVNVIFKNDYIKEQTPQSRKLASQSILKKWQERLVGRAERPKNNLLR
KGVTSYSSKLFHFF

Specific function: Unknown

COG id: COG4289

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57276; Mature: 57145

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKFIQASERPYIPCEHPDLNQYLQLFKQNLIRCKLKRRGFVDLDEQIIAVFKQNTELKV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEE
QCEALVDYVAEAFEHYAVWDYSHAYYPGVSSQQTARLDAMEGSSRVLPTLAAWLHANPNT
EHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCC
ALKSSTLSEAQFNLVDWIKCAFLAGTNPHHSGYWGNIEDYDQRICESADLALALWLSKEQ
HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECHHH
VWQTLASDEQQQIVTWFTQVNHVETVDNNWHLFPLTVQLVMKDLTGEDHVEHHRYARVKE
HHHHHHCCHHHHHHHHHHHHCCEEEECCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHH
FFVGDGWFRDGAKGNYDYYNAWGFHYSLYWLAQIDPEFDPHFIRHSLRTFSDKYRYFFTP
HHCCCCEECCCCCCCCCCEEECEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECC
QGFPLFGRSACYRLSATAPLIATLDVCGANLPNEYLGQFKRAFKTNLCYFISNGALQKGR
CCCCCCCCCHHEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCC
PTQGLFADDIRLTDNYSGPASSFWSLRALNIALFCGDRIGLWEAKEQPLEIEKESFMFSL
CCCCCEECCEEEECCCCCCCHHHHHHEEEEEEEEECCCCCCCCCCCCCCEEECCCEEEEE
NGPNMLVVGIQETQEVNVIFKNDYIKEQTPQSRKLASQSILKKWQERLVGRAERPKNNLL
CCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RKGVTSYSSKLFHFF
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKFIQASERPYIPCEHPDLNQYLQLFKQNLIRCKLKRRGFVDLDEQIIAVFKQNTELKV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEE
QCEALVDYVAEAFEHYAVWDYSHAYYPGVSSQQTARLDAMEGSSRVLPTLAAWLHANPNT
EHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCC
ALKSSTLSEAQFNLVDWIKCAFLAGTNPHHSGYWGNIEDYDQRICESADLALALWLSKEQ
HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECHHH
VWQTLASDEQQQIVTWFTQVNHVETVDNNWHLFPLTVQLVMKDLTGEDHVEHHRYARVKE
HHHHHHCCHHHHHHHHHHHHCCEEEECCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHH
FFVGDGWFRDGAKGNYDYYNAWGFHYSLYWLAQIDPEFDPHFIRHSLRTFSDKYRYFFTP
HHCCCCEECCCCCCCCCCEEECEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECC
QGFPLFGRSACYRLSATAPLIATLDVCGANLPNEYLGQFKRAFKTNLCYFISNGALQKGR
CCCCCCCCCHHEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCC
PTQGLFADDIRLTDNYSGPASSFWSLRALNIALFCGDRIGLWEAKEQPLEIEKESFMFSL
CCCCCEECCEEEECCCCCCCHHHHHHEEEEEEEEECCCCCCCCCCCCCCEEECCCEEEEE
NGPNMLVVGIQETQEVNVIFKNDYIKEQTPQSRKLASQSILKKWQERLVGRAERPKNNLL
CCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RKGVTSYSSKLFHFF
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA