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The map label for this gene is agaC [H]

Identifier: 37678722

GI number: 37678722

Start: 526385

End: 527158

Strand: Direct

Name: agaC [H]

Synonym: VV0538

Alternate gene names: 37678722

Gene position: 526385-527158 (Clockwise)

Preceding gene: 37678721

Following gene: 37678723

Centisome position: 15.69

GC content: 43.02

Gene sequence:

>774_bases
ATGTTAATGGAAGCTATATTAGTCGCAGTATGGGCGGCATTATGTGGCATCGATAAATTCGATGTATTCACAGGTATCCA
CCGACCTCTGGTAACAGGTACGGTTGTGGGTTTAATTCTCGGTGACCTGCAAATGGGTCTCATTGCAGGTGCAACATTTG
AGTTAGCATGGCTGGGTCTTGTTGCGAACGCAGGTGTTCAGCCACCAGATACAACAGTTGGCGCGATCGTTGGTACTATG
TTTGCGATCAAACTAGATATGACGCCAGAAGCCGCTATTGGTATGGCAATTCCTTTCGCTCTAGCAATGCAAACATGTGT
TCTTTTCCTATTTACTTCTTGTGCACCAATGATGCAGAAAGCGGACGAATATGCAGAAAGTCTGAACCTGAAAGGGATTG
ATAAGCTTATCTACATCGGTCTAAGTGCTCGTGCATTGCTATACGGTGTAGTTGGTTTCTGTGCAATCTACTTTGGTGTG
ACAGGTGCTGAATTCATTCAAGAATATCTTCCACAAAGTATCGTGAAAGGTATGGCGATTGCTGGTGGTATGATGCCTGC
AGTAGGTTTCGCAATGTTACTACGTACTATGTTTAACGTGGCTATCTTGCCTTACTTCTTCTTAGGTTTCGTGTGTTCAA
CATACTTTAATATGCCAATTCTAGGTACAGCACTTGTGTTTACGTGTGTAGCTATCTTGGATTACATGAACAATAAAAAG
TCTGACACTCCTCAAGCAACGACTCAAACGCAGGTATTTGACGATGAACTCTAA

Upstream 100 bases:

>100_bases
TGGAAGTGTAAGCACTATTCAGCATATGCCTGAAAGTAACAAAGAGTGCATTTTTGAAATGACAAAAGATTTACAAATCT
AATATCCAAGGTGAACCAAA

Downstream 100 bases:

>100_bases
TGCAGAAATGACAATGAACCCTGATCAGTACCATGAAGATGCGGTATCTTCAGTAATCAGCAATACTGATAGTTACAGTG
ATCAGGCAGTAAAGAAAGTA

Product: phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC

Products: NA

Alternate protein names: EIIC-Aga; PTS system N-acetylgalactosamine-specific EIIC component 1 [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MLMEAILVAVWAALCGIDKFDVFTGIHRPLVTGTVVGLILGDLQMGLIAGATFELAWLGLVANAGVQPPDTTVGAIVGTM
FAIKLDMTPEAAIGMAIPFALAMQTCVLFLFTSCAPMMQKADEYAESLNLKGIDKLIYIGLSARALLYGVVGFCAIYFGV
TGAEFIQEYLPQSIVKGMAIAGGMMPAVGFAMLLRTMFNVAILPYFFLGFVCSTYFNMPILGTALVFTCVAILDYMNNKK
SDTPQATTQTQVFDDEL

Sequences:

>Translated_257_residues
MLMEAILVAVWAALCGIDKFDVFTGIHRPLVTGTVVGLILGDLQMGLIAGATFELAWLGLVANAGVQPPDTTVGAIVGTM
FAIKLDMTPEAAIGMAIPFALAMQTCVLFLFTSCAPMMQKADEYAESLNLKGIDKLIYIGLSARALLYGVVGFCAIYFGV
TGAEFIQEYLPQSIVKGMAIAGGMMPAVGFAMLLRTMFNVAILPYFFLGFVCSTYFNMPILGTALVFTCVAILDYMNNKK
SDTPQATTQTQVFDDEL
>Mature_257_residues
MLMEAILVAVWAALCGIDKFDVFTGIHRPLVTGTVVGLILGDLQMGLIAGATFELAWLGLVANAGVQPPDTTVGAIVGTM
FAIKLDMTPEAAIGMAIPFALAMQTCVLFLFTSCAPMMQKADEYAESLNLKGIDKLIYIGLSARALLYGVVGFCAIYFGV
TGAEFIQEYLPQSIVKGMAIAGGMMPAVGFAMLLRTMFNVAILPYFFLGFVCSTYFNMPILGTALVFTCVAILDYMNNKK
SDTPQATTQTQVFDDEL

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3715

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1789528, Length=256, Percent_Identity=30.46875, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1788121, Length=265, Percent_Identity=28.3018867924528, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004700
- InterPro:   IPR018404 [H]

Pfam domain/function: PF03609 EII-Sor [H]

EC number: NA

Molecular weight: Translated: 27542; Mature: 27542

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: PS51106 PTS_EIIC_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCHHHHHHCCCCC
>Mature Secondary Structure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CCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 8932697 [H]