| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is plsC [H]
Identifier: 37678646
GI number: 37678646
Start: 447850
End: 448575
Strand: Direct
Name: plsC [H]
Synonym: VV0462
Alternate gene names: 37678646
Gene position: 447850-448575 (Clockwise)
Preceding gene: 37678645
Following gene: 37678651
Centisome position: 13.35
GC content: 47.11
Gene sequence:
>726_bases ATGATTGCTCTAGTGCGTTTGTTAGCAACGGCGTTATTTGCTGTTGTGATGTTCGTCTTTGGTTGTGGCTACTGTTTACT TAGCCCTAGAAACCCTAAGCATGTGTTCACCTTTGGCCGTCTGTTTGCCAAAATGTCGCGTGTATTTGGCATTAAGCTGG AACTGCGTCTTCCTGAAGATGCCTACCAACGTGGCCAACATATCTACATTGCCAACCACCAAAATAACTGGGACCTCTTT ACCGTTTCTGCGGCAGTGACACCCAAAGTTGTAACGGTAGGCAAAAAGAGCCTAGCGTGGTTACCGCTGTTTGGACAGCT TTACTGGCTGACGGGTAACATCTTGATTGACCGTGCGAATAAGACCAAAGCCAAAGGGACGATTGATCAGGTAGTGGCAA GCATGAAAGCAAGTGAAGTTTCGGTATGGATGTTTCCTGAAGGCACACGCTCACGCGGTCGTGGTCTCATGCCTTTCAAA ACGGGCGCTTTTCACGCTGCGATTGGCGCTGGCGTACCGATTATCCCGATCGTATGTAGCTCAACGGATCAACTGAAGTT GAATCGCTGGAATAATGGCCACGTGATTGTCGAAATGTTGGATCCCATTAGCACCGAAGGTTATGGCAAAGAGCATATTC GCGAGCTTGCAGAAATCTGTCGCGAAAAGATGAAAGCCAAATTAGAAAGTTTGGATGAAGAAGTGAAGTTACGTAATCAG CAATGA
Upstream 100 bases:
>100_bases CTTTTTTACATTTTAGAAGCTGTTTTTGTCAGAGAAGTAGCGCGTAACTTTCAATATCTTGGGAGTGCAATGCCTATCTG AATGAATACCGGAGTTATAA
Downstream 100 bases:
>100_bases TTCACTTAAAAATCGATGGTTAAAATAGAAAGGATGTCATATGACATCCTTTTTTTGTTCCGGCTTAACTGAGTAAAATT CGGGGCTAAGCTTGCGGTTT
Product: 1-acyl-sn-glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT; Phosphatidic acid synthase; PA synthase [H]
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MIALVRLLATALFAVVMFVFGCGYCLLSPRNPKHVFTFGRLFAKMSRVFGIKLELRLPEDAYQRGQHIYIANHQNNWDLF TVSAAVTPKVVTVGKKSLAWLPLFGQLYWLTGNILIDRANKTKAKGTIDQVVASMKASEVSVWMFPEGTRSRGRGLMPFK TGAFHAAIGAGVPIIPIVCSSTDQLKLNRWNNGHVIVEMLDPISTEGYGKEHIRELAEICREKMKAKLESLDEEVKLRNQ Q
Sequences:
>Translated_241_residues MIALVRLLATALFAVVMFVFGCGYCLLSPRNPKHVFTFGRLFAKMSRVFGIKLELRLPEDAYQRGQHIYIANHQNNWDLF TVSAAVTPKVVTVGKKSLAWLPLFGQLYWLTGNILIDRANKTKAKGTIDQVVASMKASEVSVWMFPEGTRSRGRGLMPFK TGAFHAAIGAGVPIIPIVCSSTDQLKLNRWNNGHVIVEMLDPISTEGYGKEHIRELAEICREKMKAKLESLDEEVKLRNQ Q >Mature_241_residues MIALVRLLATALFAVVMFVFGCGYCLLSPRNPKHVFTFGRLFAKMSRVFGIKLELRLPEDAYQRGQHIYIANHQNNWDLF TVSAAVTPKVVTVGKKSLAWLPLFGQLYWLTGNILIDRANKTKAKGTIDQVVASMKASEVSVWMFPEGTRSRGRGLMPFK TGAFHAAIGAGVPIIPIVCSSTDQLKLNRWNNGHVIVEMLDPISTEGYGKEHIRELAEICREKMKAKLESLDEEVKLRNQ Q
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating an acyl moiety at the 2 position. This enzyme can utilize either acyl-CoA or acyl-ACP as the fatty acyl donor [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=203, Percent_Identity=32.0197044334975, Blast_Score=120, Evalue=8e-28, Organism=Homo sapiens, GI15100175, Length=203, Percent_Identity=32.0197044334975, Blast_Score=120, Evalue=8e-28, Organism=Homo sapiens, GI6041665, Length=180, Percent_Identity=29.4444444444444, Blast_Score=100, Evalue=9e-22, Organism=Escherichia coli, GI1789395, Length=239, Percent_Identity=59.8326359832636, Blast_Score=306, Evalue=6e-85, Organism=Caenorhabditis elegans, GI17564032, Length=179, Percent_Identity=35.195530726257, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17568319, Length=208, Percent_Identity=33.1730769230769, Blast_Score=119, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6320151, Length=231, Percent_Identity=33.3333333333333, Blast_Score=126, Evalue=3e-30, Organism=Drosophila melanogaster, GI281364648, Length=228, Percent_Identity=28.9473684210526, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24582856, Length=228, Percent_Identity=28.9473684210526, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24582854, Length=228, Percent_Identity=28.9473684210526, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24641614, Length=188, Percent_Identity=37.2340425531915, Blast_Score=117, Evalue=7e-27, Organism=Drosophila melanogaster, GI24641612, Length=188, Percent_Identity=37.2340425531915, Blast_Score=117, Evalue=7e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 27019; Mature: 27019
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIALVRLLATALFAVVMFVFGCGYCLLSPRNPKHVFTFGRLFAKMSRVFGIKLELRLPED CHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEEECCHH AYQRGQHIYIANHQNNWDLFTVSAAVTPKVVTVGKKSLAWLPLFGQLYWLTGNILIDRAN HHHCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCEEEHHHHHEEEEEECEEEEECCC KTKAKGTIDQVVASMKASEVSVWMFPEGTRSRGRGLMPFKTGAFHAAIGAGVPIIPIVCS CCCCCCCHHHHHHHHHHCCEEEEECCCCCHHCCCCCCCCCCCCHHHHHCCCCCEEEEEEC STDQLKLNRWNNGHVIVEMLDPISTEGYGKEHIRELAEICREKMKAKLESLDEEVKLRNQ CCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC Q C >Mature Secondary Structure MIALVRLLATALFAVVMFVFGCGYCLLSPRNPKHVFTFGRLFAKMSRVFGIKLELRLPED CHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEEECCHH AYQRGQHIYIANHQNNWDLFTVSAAVTPKVVTVGKKSLAWLPLFGQLYWLTGNILIDRAN HHHCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCEEEHHHHHEEEEEECEEEEECCC KTKAKGTIDQVVASMKASEVSVWMFPEGTRSRGRGLMPFKTGAFHAAIGAGVPIIPIVCS CCCCCCCHHHHHHHHHHCCEEEEECCCCCHHCCCCCCCCCCCCHHHHHCCCCCEEEEEEC STDQLKLNRWNNGHVIVEMLDPISTEGYGKEHIRELAEICREKMKAKLESLDEEVKLRNQ CCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1557036; 9278503 [H]