| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678615
Identifier: 37678615
GI number: 37678615
Start: 423264
End: 423623
Strand: Direct
Name: 37678615
Synonym: VV0431
Alternate gene names: NA
Gene position: 423264-423623 (Clockwise)
Preceding gene: 37678614
Following gene: 37678619
Centisome position: 12.62
GC content: 50.28
Gene sequence:
>360_bases ATGAAAGCTCTCGTATTGACGTTCCCGCTGCTGTTGCTGGTTGGCTGCGTGCAGACTCCGTTACCGCAATCGGAGCAAGC TTTAGATTGGCACACCTTTGGCGTTGAAAGCGCGTTAGAAGGTAAGATGGCTTTAAGCGAAGCACGTTTACTCAAATTGG CGGAACCGCGAAACCTCTCGGCCAATTTGCTGGCCTCATACCAAGCGGGCTACCAAGAGGGTAAGCAGCAGTACTGCCAA CAGAATGCCTATATGTTGGGGGTGATTGGCAAGCCTTACTATGGCATTTGTGATGATGTTGACCCGTTCTTCAAACAGGA TTATATCTCCGGACAGATGTCGACCGCTGGTGGTTTGTAA
Upstream 100 bases:
>100_bases GCGATTGAGGCTCGAAGGTCGTATACTGTGATAGGTTCTGTTGTTGTGGATGAGGAAACGATAGTGCCTTGAGGACCTAT CTCAACAAAGGAGACCGAGC
Downstream 100 bases:
>100_bases AGGCGAAAGAGATGCTAAGAACCGAAGTGCTTGTCAGGATCAAAAAGAGCTGTGTTCACACAGCTCTTTTGTCTTTCAAT GGGCAAGGATTATTTGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MKALVLTFPLLLLVGCVQTPLPQSEQALDWHTFGVESALEGKMALSEARLLKLAEPRNLSANLLASYQAGYQEGKQQYCQ QNAYMLGVIGKPYYGICDDVDPFFKQDYISGQMSTAGGL
Sequences:
>Translated_119_residues MKALVLTFPLLLLVGCVQTPLPQSEQALDWHTFGVESALEGKMALSEARLLKLAEPRNLSANLLASYQAGYQEGKQQYCQ QNAYMLGVIGKPYYGICDDVDPFFKQDYISGQMSTAGGL >Mature_119_residues MKALVLTFPLLLLVGCVQTPLPQSEQALDWHTFGVESALEGKMALSEARLLKLAEPRNLSANLLASYQAGYQEGKQQYCQ QNAYMLGVIGKPYYGICDDVDPFFKQDYISGQMSTAGGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13067; Mature: 13067
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALVLTFPLLLLVGCVQTPLPQSEQALDWHTFGVESALEGKMALSEARLLKLAEPRNLS CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCC ANLLASYQAGYQEGKQQYCQQNAYMLGVIGKPYYGICDDVDPFFKQDYISGQMSTAGGL HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKALVLTFPLLLLVGCVQTPLPQSEQALDWHTFGVESALEGKMALSEARLLKLAEPRNLS CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCC ANLLASYQAGYQEGKQQYCQQNAYMLGVIGKPYYGICDDVDPFFKQDYISGQMSTAGGL HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA