| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is ytfP [C]
Identifier: 37678614
GI number: 37678614
Start: 422789
End: 423163
Strand: Direct
Name: ytfP [C]
Synonym: VV0430
Alternate gene names: 37678614
Gene position: 422789-423163 (Clockwise)
Preceding gene: 37678613
Following gene: 37678615
Centisome position: 12.6
GC content: 49.87
Gene sequence:
>375_bases ATGGTCAGTTGGCGACAAGGAGTGGTTATGCAACATTTAGTGTTTGTCTATGGCACGTTGAGAAAAGGTGAGTCCAATCA CCACTATTTGCAACACAGTGAGTTTTTGGGTGGTTGCCAGAGTGGGCAAGAATATCGCCTGTACGATCTCGGTGATTACC CAGCGGTTGGCGAAGGCAATCGCGCCGTCAGTGGGGAAGTGTATCTGATTGACGACGCAACACTGCAAGCCCTTGATAAG CTCGAAGACGTACCAGTGGAATACCGCCGTGAAACCATCGCGACCCCATTTGGTCAAGCGTGGATTTATCTCTATCAAGA CAGCAGTAAGTTGGTGGAGGAAATTGCCTCAGGAGATTGGTGCCAACGCGTTTGA
Upstream 100 bases:
>100_bases TCTAGAAGGGGTTTCAGGGGTTGAAAGCGCCGTTGATCTGCTTTATCAGTTTGAGTTTGATTAAAATCTCGCCACATGCT ATTCACTGCACTTAGGCGAA
Downstream 100 bases:
>100_bases GCGATTGAGGCTCGAAGGTCGTATACTGTGATAGGTTCTGTTGTTGTGGATGAGGAAACGATAGTGCCTTGAGGACCTAT CTCAACAAAGGAGACCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MVSWRQGVVMQHLVFVYGTLRKGESNHHYLQHSEFLGGCQSGQEYRLYDLGDYPAVGEGNRAVSGEVYLIDDATLQALDK LEDVPVEYRRETIATPFGQAWIYLYQDSSKLVEEIASGDWCQRV
Sequences:
>Translated_124_residues MVSWRQGVVMQHLVFVYGTLRKGESNHHYLQHSEFLGGCQSGQEYRLYDLGDYPAVGEGNRAVSGEVYLIDDATLQALDK LEDVPVEYRRETIATPFGQAWIYLYQDSSKLVEEIASGDWCQRV >Mature_124_residues MVSWRQGVVMQHLVFVYGTLRKGESNHHYLQHSEFLGGCQSGQEYRLYDLGDYPAVGEGNRAVSGEVYLIDDATLQALDK LEDVPVEYRRETIATPFGQAWIYLYQDSSKLVEEIASGDWCQRV
Specific function: Putative gamma-glutamylcyclotransferase [H]
COG id: COG2105
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamylcyclotransferase family [H]
Homologues:
Organism=Escherichia coli, GI1790668, Length=110, Percent_Identity=46.3636363636364, Blast_Score=99, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009288 - InterPro: IPR013024 [H]
Pfam domain/function: PF06094 AIG2 [H]
EC number: NA
Molecular weight: Translated: 14150; Mature: 14150
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSWRQGVVMQHLVFVYGTLRKGESNHHYLQHSEFLGGCQSGQEYRLYDLGDYPAVGEGN CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHCCCCCCCCEEEEECCCCCCCCCCC RAVSGEVYLIDDATLQALDKLEDVPVEYRRETIATPFGQAWIYLYQDSSKLVEEIASGDW EEECCCEEEEEHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHCCCH CQRV HCCC >Mature Secondary Structure MVSWRQGVVMQHLVFVYGTLRKGESNHHYLQHSEFLGGCQSGQEYRLYDLGDYPAVGEGN CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHCCCCCCCCEEEEECCCCCCCCCCC RAVSGEVYLIDDATLQALDKLEDVPVEYRRETIATPFGQAWIYLYQDSSKLVEEIASGDW EEECCCEEEEEHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHCCCH CQRV HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]