Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37678542

Identifier: 37678542

GI number: 37678542

Start: 367623

End: 369434

Strand: Direct

Name: 37678542

Synonym: VV0358

Alternate gene names: NA

Gene position: 367623-369434 (Clockwise)

Preceding gene: 37678541

Following gene: 37678543

Centisome position: 10.96

GC content: 43.6

Gene sequence:

>1812_bases
ATGAGTCTCAAATTAAAAGCGCAAACTGCAATCGACTTAGGACTTTTAAACCTAGCTCGAGTCGCTGGCTATCAACTTGG
TGTTCGAAGTGGACTCAACCCAGTTAAGCGCCTTTCTCAAGCCCCTGTTTCGGGGCTTTTGTTTCGACCGCTCTCCACTT
TAGTTCAATGTGAATCCAGTCAGCGATACCAATTCTCTCCTTTTGGGTGGAAGCCGAAACGATTTGTCAGTGAATTGAGA
TGGGCGGAGAGCACATTAACTGGACAAATCTACTCCAACATGGAAAAGCCTTGGTTCAGTTTGTCTGACTTTGATTCTAA
TGTTGGTGATATTAAAGGGATTTGGGAAGCATCTAGATTCGACTGGGTATTAGGCTTAGCCAAGGATTACCTTTCTGGAA
GAGAGCAAGCACTTGATGAACTGAATGCAACTGCGAAAGATTGGCTAGAGCACAATCCACCTTATTTAGGGCCGAACTGG
AAGTGTGGTCAAGAAGCTTCAATAAGAGTTATGCACTTGGCTATGACGGCTAAATTGCTGAATCAAGTTGAAAGATCAGA
ACCCGCACTGTTGGCATTTGTTAAAGCTCACTTAAAACGTATTGCTCCGACAATCTCCTATGCCGTTGCTCAAGATAATA
ACCATGGAACTTCTGAAGCGGCCGCTCTATTTATAGGTGGAAGTTGGCTTGTGTCTAATGGTAATAAAAGCGCTGTTCGT
TGGCAAAAAATGGGGCGCAAGTGGTTAGAGAATAGAGTAAAGCATTTAATCGACGACGATGGAACTTTCAGCCAGTACTC
CGTCAACTACCACCGAGTTATGCTAGATACATACTCAATGGCGGAGCTATGGAGACGAGAACTTAATCTCAAGTCGTTTA
GTCCGTCGTTGTATACCAGAATTGGTTTGGCGACGCATTGGTTGTATCAATTAACTCAAGAGGACAATGGAGATGCGCCT
AATTTAGGACATAACGATGGGGCAAGGTTGTTACCTTTAAGTGACACGGATTACCGAGACTTTCGTCCAACGGTTCAGCT
CGCGTCAATCCTATTCTTGCAGTCATCTGCTTGGGAAAAAGCAGGTAGCTATGATGAACCACTTAAACTTCTGGGGTTAA
GTAAGCCAAAGCAAGCACTTAACAAACCAAGTTCATTCCATTTTGCACAAGGGGGATACGCTGGGTTAAGAAGCCAAACG
GGAGCGTTTGTACTATTCAATTACCCTATCTTCCGTTTTCGACCTGCTCAAAACGATGCCCTGCATGTGGACTTTTGGCT
TGATGGCGTAAACTTGCTAAGAGACGGTGGCACCTTTAGTTACAATGCTGGTCAAGCATATATCGATTACTATGGTGGTA
CGCAAAGTCATAACACCGTTCAGTTTGATGAGCATGAACAAATGCCACGCTTGAGTAGATTTCTCTTAGGTGCCTGGCTT
AAGGCTGAAAATGTGCATTGGGATGAAGCTCGACAATATTGTAGTGCTAGTTACCGCGACTATTTTGGGTGCGGTCATAA
AAGATATGTCTCTCTTTCAAACAGTACGCTGAGAGTTGTAGATGATATCCATGGCGTGCAGAAAAAAGCGATACTACGTT
GGCGTTTAAACCCAGGGAAATGGATTATTGAAGGTAATCGAGTCACTAACCATACTCATTCTATAACGATAAGTAGTAAT
ACCGACATCAAACGGCTGGAGTTAGTCGAAGGAAAGGAGTCGCGCTATTACTACCAAGAAACTTCCATTCCCGTTCTGGA
AATCGAAGTTACTTCAGATGGCCAAATAACGACAGAGTATAATTACAGCTAA

Upstream 100 bases:

>100_bases
GCGCTATTGAATCAGGTAAAGAGTCACCAATTCCAGCTCGAGAGTTGTTTGAGGTAGCAAGAGTTACCATTGAAATAGCG
GATCAATTGCGTAAACAACA

Downstream 100 bases:

>100_bases
TGAATATTCTTTATTTTCACCAGCACTTTTCAACACCTAAAGGTTCTACTGGAATACGTTCATATGAAATGGCAAGGCGC
CTTATACATCATGGGCATAA

Product: hypothetical protein

Products: NA

Alternate protein names: Cytoplasmic Protein; Heparinase II/III-Like Protein

Number of amino acids: Translated: 603; Mature: 602

Protein sequence:

>603_residues
MSLKLKAQTAIDLGLLNLARVAGYQLGVRSGLNPVKRLSQAPVSGLLFRPLSTLVQCESSQRYQFSPFGWKPKRFVSELR
WAESTLTGQIYSNMEKPWFSLSDFDSNVGDIKGIWEASRFDWVLGLAKDYLSGREQALDELNATAKDWLEHNPPYLGPNW
KCGQEASIRVMHLAMTAKLLNQVERSEPALLAFVKAHLKRIAPTISYAVAQDNNHGTSEAAALFIGGSWLVSNGNKSAVR
WQKMGRKWLENRVKHLIDDDGTFSQYSVNYHRVMLDTYSMAELWRRELNLKSFSPSLYTRIGLATHWLYQLTQEDNGDAP
NLGHNDGARLLPLSDTDYRDFRPTVQLASILFLQSSAWEKAGSYDEPLKLLGLSKPKQALNKPSSFHFAQGGYAGLRSQT
GAFVLFNYPIFRFRPAQNDALHVDFWLDGVNLLRDGGTFSYNAGQAYIDYYGGTQSHNTVQFDEHEQMPRLSRFLLGAWL
KAENVHWDEARQYCSASYRDYFGCGHKRYVSLSNSTLRVVDDIHGVQKKAILRWRLNPGKWIIEGNRVTNHTHSITISSN
TDIKRLELVEGKESRYYYQETSIPVLEIEVTSDGQITTEYNYS

Sequences:

>Translated_603_residues
MSLKLKAQTAIDLGLLNLARVAGYQLGVRSGLNPVKRLSQAPVSGLLFRPLSTLVQCESSQRYQFSPFGWKPKRFVSELR
WAESTLTGQIYSNMEKPWFSLSDFDSNVGDIKGIWEASRFDWVLGLAKDYLSGREQALDELNATAKDWLEHNPPYLGPNW
KCGQEASIRVMHLAMTAKLLNQVERSEPALLAFVKAHLKRIAPTISYAVAQDNNHGTSEAAALFIGGSWLVSNGNKSAVR
WQKMGRKWLENRVKHLIDDDGTFSQYSVNYHRVMLDTYSMAELWRRELNLKSFSPSLYTRIGLATHWLYQLTQEDNGDAP
NLGHNDGARLLPLSDTDYRDFRPTVQLASILFLQSSAWEKAGSYDEPLKLLGLSKPKQALNKPSSFHFAQGGYAGLRSQT
GAFVLFNYPIFRFRPAQNDALHVDFWLDGVNLLRDGGTFSYNAGQAYIDYYGGTQSHNTVQFDEHEQMPRLSRFLLGAWL
KAENVHWDEARQYCSASYRDYFGCGHKRYVSLSNSTLRVVDDIHGVQKKAILRWRLNPGKWIIEGNRVTNHTHSITISSN
TDIKRLELVEGKESRYYYQETSIPVLEIEVTSDGQITTEYNYS
>Mature_602_residues
SLKLKAQTAIDLGLLNLARVAGYQLGVRSGLNPVKRLSQAPVSGLLFRPLSTLVQCESSQRYQFSPFGWKPKRFVSELRW
AESTLTGQIYSNMEKPWFSLSDFDSNVGDIKGIWEASRFDWVLGLAKDYLSGREQALDELNATAKDWLEHNPPYLGPNWK
CGQEASIRVMHLAMTAKLLNQVERSEPALLAFVKAHLKRIAPTISYAVAQDNNHGTSEAAALFIGGSWLVSNGNKSAVRW
QKMGRKWLENRVKHLIDDDGTFSQYSVNYHRVMLDTYSMAELWRRELNLKSFSPSLYTRIGLATHWLYQLTQEDNGDAPN
LGHNDGARLLPLSDTDYRDFRPTVQLASILFLQSSAWEKAGSYDEPLKLLGLSKPKQALNKPSSFHFAQGGYAGLRSQTG
AFVLFNYPIFRFRPAQNDALHVDFWLDGVNLLRDGGTFSYNAGQAYIDYYGGTQSHNTVQFDEHEQMPRLSRFLLGAWLK
AENVHWDEARQYCSASYRDYFGCGHKRYVSLSNSTLRVVDDIHGVQKKAILRWRLNPGKWIIEGNRVTNHTHSITISSNT
DIKRLELVEGKESRYYYQETSIPVLEIEVTSDGQITTEYNYS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68556; Mature: 68425

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKLKAQTAIDLGLLNLARVAGYQLGVRSGLNPVKRLSQAPVSGLLFRPLSTLVQCESS
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCC
QRYQFSPFGWKPKRFVSELRWAESTLTGQIYSNMEKPWFSLSDFDSNVGDIKGIWEASRF
CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHCCHHH
DWVLGLAKDYLSGREQALDELNATAKDWLEHNPPYLGPNWKCGQEASIRVMHLAMTAKLL
HHHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHH
NQVERSEPALLAFVKAHLKRIAPTISYAVAQDNNHGTSEAAALFIGGSWLVSNGNKSAVR
HHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEECCEEEEECCCCHHHH
WQKMGRKWLENRVKHLIDDDGTFSQYSVNYHRVMLDTYSMAELWRRELNLKSFSPSLYTR
HHHHHHHHHHHHHHHHHCCCCCCEEEECEEEEEEEEHHHHHHHHHHHCCCCCCCCHHHHH
IGLATHWLYQLTQEDNGDAPNLGHNDGARLLPLSDTDYRDFRPTVQLASILFLQSSAWEK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
AGSYDEPLKLLGLSKPKQALNKPSSFHFAQGGYAGLRSQTGAFVLFNYPIFRFRPAQNDA
CCCCCCCHHHHCCCCCHHHHCCCCCEEECCCCCCCCCCCCCEEEEEECCEEEEECCCCCE
LHVDFWLDGVNLLRDGGTFSYNAGQAYIDYYGGTQSHNTVQFDEHEQMPRLSRFLLGAWL
EEEEEEECCHHHHCCCCCEEECCCCEEEEECCCCCCCCCEECCCHHCCHHHHHHHHHHHH
KAENVHWDEARQYCSASYRDYFGCGHKRYVSLSNSTLRVVDDIHGVQKKAILRWRLNPGK
HCCCCCHHHHHHHHHCCHHHHHCCCCEEEEEECCCEEEEHHHHHHHHHEEEEEEEECCCC
WIIEGNRVTNHTHSITISSNTDIKRLELVEGKESRYYYQETSIPVLEIEVTSDGQITTEY
EEEECCEEECCEEEEEEECCCCCEEEEEECCCCCCEEEEECCCEEEEEEECCCCEEEEEC
NYS
CCC
>Mature Secondary Structure 
SLKLKAQTAIDLGLLNLARVAGYQLGVRSGLNPVKRLSQAPVSGLLFRPLSTLVQCESS
CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCC
QRYQFSPFGWKPKRFVSELRWAESTLTGQIYSNMEKPWFSLSDFDSNVGDIKGIWEASRF
CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHCCHHH
DWVLGLAKDYLSGREQALDELNATAKDWLEHNPPYLGPNWKCGQEASIRVMHLAMTAKLL
HHHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHH
NQVERSEPALLAFVKAHLKRIAPTISYAVAQDNNHGTSEAAALFIGGSWLVSNGNKSAVR
HHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEECCEEEEECCCCHHHH
WQKMGRKWLENRVKHLIDDDGTFSQYSVNYHRVMLDTYSMAELWRRELNLKSFSPSLYTR
HHHHHHHHHHHHHHHHHCCCCCCEEEECEEEEEEEEHHHHHHHHHHHCCCCCCCCHHHHH
IGLATHWLYQLTQEDNGDAPNLGHNDGARLLPLSDTDYRDFRPTVQLASILFLQSSAWEK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
AGSYDEPLKLLGLSKPKQALNKPSSFHFAQGGYAGLRSQTGAFVLFNYPIFRFRPAQNDA
CCCCCCCHHHHCCCCCHHHHCCCCCEEECCCCCCCCCCCCCEEEEEECCEEEEECCCCCE
LHVDFWLDGVNLLRDGGTFSYNAGQAYIDYYGGTQSHNTVQFDEHEQMPRLSRFLLGAWL
EEEEEEECCHHHHCCCCCEEECCCCEEEEECCCCCCCCCEECCCHHCCHHHHHHHHHHHH
KAENVHWDEARQYCSASYRDYFGCGHKRYVSLSNSTLRVVDDIHGVQKKAILRWRLNPGK
HCCCCCHHHHHHHHHCCHHHHHCCCCEEEEEECCCEEEEHHHHHHHHHEEEEEEEECCCC
WIIEGNRVTNHTHSITISSNTDIKRLELVEGKESRYYYQETSIPVLEIEVTSDGQITTEY
EEEECCEEECCEEEEEEECCCCCEEEEEECCCCCCEEEEECCCEEEEEEECCCCEEEEEC
NYS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA