Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37678538

Identifier: 37678538

GI number: 37678538

Start: 362904

End: 364055

Strand: Direct

Name: 37678538

Synonym: VV0354

Alternate gene names: NA

Gene position: 362904-364055 (Clockwise)

Preceding gene: 37678537

Following gene: 37678539

Centisome position: 10.82

GC content: 34.98

Gene sequence:

>1152_bases
ATGATTATTATGACTAAAAATAGAGAAAACCAAATCTGTACTAATTGTGTTATGGACACAACTGACTCAAAAATTACATT
TGACTCAAAAGGTGTTTGCGATCACTGTAATGATTTTTACGAGAACGTTCAACCTAATTGGCATACTGACGAGAAAGGTC
ATCTAGAGCTTGAGAGAATTATCACCAAGATAAAAAAAGATGGTGAAGGTAGAGATTTTGACTGCATTATGGGCATGAGT
GGAGGCGCTGATAGTTCTTATTTATTGCATGTCGCAGTTAAGAAATATGGCTTGAGACCGTTAGTTTTCCATGTTGATGG
CGGTTGGAACTCGCAAATTGCAGTTAATAACATCAATGTAATGATTGAAAAGTTAGGTCTAGATCTATATACAGAAGTAA
TTAACTGGGAGGAAATGAAAGCTTTTCAAAAGGCGTACTTTAAAGCTGGTGTTTCTAATATAGACATCCCACAAGATCAT
GCATTTATTGCAACATTATATAACTTCGCTGCAAAACATAAGATAAAGTATATTTTGAATGGCGGTAATATATCAACTGA
GTGTGTGCGTAACCCTCTTGAATGGATATATTATGGTACTGATATGGCGCAGATCAAAGATATTAGAAAGCGCTTTTGTG
ATAATTCTCTAAAAACCTATCCTTTTAGCAATGTATTAAAGCACAAACTTTATCTTCGTTATATTCAAAGGATACAAGTA
GTTAAGCCGTTAAATTATTTTCCTTATATAAAAGAAGAAGCAATGAAAGAGCTAGAACGTGAGTATGGCTGGGTACCATA
TCCACAAAAGCATTTCGAAAGTCGCTTTACGCGTTTTTATGAAGGATATTGGCTGCCACGTAAGTTTGGTTACGATACTC
GTAAGGTTCAGTATTCAAGTTTGATCTTAACGGGTCAAATGACCAGAGAAGAGGCGATAGAAAAATTAAAATTTCCGGCA
ATAACTGATGAAGACGGTAAACATGATCTTGAATATATTGCCAACAAGCTTGATATTCCTGTTTCAGAGTTACAAAGTTA
CTTTGAACAACCGAACAAAACATACAAAGATTACAATAATCAAGAGTCTATGTTTGAGTTTGGAGCGAAAGTATTGCGAT
GGTTAGGTGTTGAGAGGTCTATTAAACGATGA

Upstream 100 bases:

>100_bases
CTGGTAATGCGCCTGAGCTTAGATGCTACGTTGAAAGTGGTTGTCTTGAAAGTTTAGAAGTGCTCTTAAAATCTGTTTTG
AAAAATATTGAAGAAATGCA

Downstream 100 bases:

>100_bases
TTACTATCGTTGATTATGGTCTTGGTAATATCAAGGCATTTGCTAACTTATACAAGAAACTGAATATTGAGTTAGTGTTT
GCTAGTGATGTAAATGACCT

Product: putitive LPS biosynthesis protein

Products: NA

Alternate protein names: N-Acetyl Sugar Amidotransferase; LPS Biosynthesis Protein; PP-Loop Superfamily Protein; Lipopolysaccharide Synthesis Protein; Glutamine Amidotransferase Class-II; ATPase; ExsB Family Protein; Lipopolysaccharide Biosynthesis Protein; Cell Cycle Control ATPase; PP-Loop Domain-Containing Protein; PP-Loop Domain Protein; Putitive LPS Biosynthesis Protein

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MIIMTKNRENQICTNCVMDTTDSKITFDSKGVCDHCNDFYENVQPNWHTDEKGHLELERIITKIKKDGEGRDFDCIMGMS
GGADSSYLLHVAVKKYGLRPLVFHVDGGWNSQIAVNNINVMIEKLGLDLYTEVINWEEMKAFQKAYFKAGVSNIDIPQDH
AFIATLYNFAAKHKIKYILNGGNISTECVRNPLEWIYYGTDMAQIKDIRKRFCDNSLKTYPFSNVLKHKLYLRYIQRIQV
VKPLNYFPYIKEEAMKELEREYGWVPYPQKHFESRFTRFYEGYWLPRKFGYDTRKVQYSSLILTGQMTREEAIEKLKFPA
ITDEDGKHDLEYIANKLDIPVSELQSYFEQPNKTYKDYNNQESMFEFGAKVLRWLGVERSIKR

Sequences:

>Translated_383_residues
MIIMTKNRENQICTNCVMDTTDSKITFDSKGVCDHCNDFYENVQPNWHTDEKGHLELERIITKIKKDGEGRDFDCIMGMS
GGADSSYLLHVAVKKYGLRPLVFHVDGGWNSQIAVNNINVMIEKLGLDLYTEVINWEEMKAFQKAYFKAGVSNIDIPQDH
AFIATLYNFAAKHKIKYILNGGNISTECVRNPLEWIYYGTDMAQIKDIRKRFCDNSLKTYPFSNVLKHKLYLRYIQRIQV
VKPLNYFPYIKEEAMKELEREYGWVPYPQKHFESRFTRFYEGYWLPRKFGYDTRKVQYSSLILTGQMTREEAIEKLKFPA
ITDEDGKHDLEYIANKLDIPVSELQSYFEQPNKTYKDYNNQESMFEFGAKVLRWLGVERSIKR
>Mature_383_residues
MIIMTKNRENQICTNCVMDTTDSKITFDSKGVCDHCNDFYENVQPNWHTDEKGHLELERIITKIKKDGEGRDFDCIMGMS
GGADSSYLLHVAVKKYGLRPLVFHVDGGWNSQIAVNNINVMIEKLGLDLYTEVINWEEMKAFQKAYFKAGVSNIDIPQDH
AFIATLYNFAAKHKIKYILNGGNISTECVRNPLEWIYYGTDMAQIKDIRKRFCDNSLKTYPFSNVLKHKLYLRYIQRIQV
VKPLNYFPYIKEEAMKELEREYGWVPYPQKHFESRFTRFYEGYWLPRKFGYDTRKVQYSSLILTGQMTREEAIEKLKFPA
ITDEDGKHDLEYIANKLDIPVSELQSYFEQPNKTYKDYNNQESMFEFGAKVLRWLGVERSIKR

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45066; Mature: 45066

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIMTKNRENQICTNCVMDTTDSKITFDSKGVCDHCNDFYENVQPNWHTDEKGHLELERI
CEEEECCCCCHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ITKIKKDGEGRDFDCIMGMSGGADSSYLLHVAVKKYGLRPLVFHVDGGWNSQIAVNNINV
HHHHHCCCCCCCEEEEECCCCCCCCHHHEEEEHHHHCCCEEEEEECCCCCCEEEECHHHH
MIEKLGLDLYTEVINWEEMKAFQKAYFKAGVSNIDIPQDHAFIATLYNFAAKHKIKYILN
HHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEE
GGNISTECVRNPLEWIYYGTDMAQIKDIRKRFCDNSLKTYPFSNVLKHKLYLRYIQRIQV
CCCCCHHHHHCCHHEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VKPLNYFPYIKEEAMKELEREYGWVPYPQKHFESRFTRFYEGYWLPRKFGYDTRKVQYSS
HCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEHE
LILTGQMTREEAIEKLKFPAITDEDGKHDLEYIANKLDIPVSELQSYFEQPNKTYKDYNN
EEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHCCCC
QESMFEFGAKVLRWLGVERSIKR
HHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MIIMTKNRENQICTNCVMDTTDSKITFDSKGVCDHCNDFYENVQPNWHTDEKGHLELERI
CEEEECCCCCHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ITKIKKDGEGRDFDCIMGMSGGADSSYLLHVAVKKYGLRPLVFHVDGGWNSQIAVNNINV
HHHHHCCCCCCCEEEEECCCCCCCCHHHEEEEHHHHCCCEEEEEECCCCCCEEEECHHHH
MIEKLGLDLYTEVINWEEMKAFQKAYFKAGVSNIDIPQDHAFIATLYNFAAKHKIKYILN
HHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEE
GGNISTECVRNPLEWIYYGTDMAQIKDIRKRFCDNSLKTYPFSNVLKHKLYLRYIQRIQV
CCCCCHHHHHCCHHEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VKPLNYFPYIKEEAMKELEREYGWVPYPQKHFESRFTRFYEGYWLPRKFGYDTRKVQYSS
HCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEHE
LILTGQMTREEAIEKLKFPAITDEDGKHDLEYIANKLDIPVSELQSYFEQPNKTYKDYNN
EEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHCCCC
QESMFEFGAKVLRWLGVERSIKR
HHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA