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The map label for this gene is ptmA [H]

Identifier: 37678501

GI number: 37678501

Start: 325993

End: 326766

Strand: Direct

Name: ptmA [H]

Synonym: VV0317

Alternate gene names: 37678501

Gene position: 325993-326766 (Clockwise)

Preceding gene: 37678500

Following gene: 37678502

Centisome position: 9.72

GC content: 43.02

Gene sequence:

>774_bases
ATGGAACAATTGCTTAATAATAAAACTATTCTTGTTGCCGGGGCGGGTGGTCTTTTGGGGACCCGCTTAGTTCCCGCTTT
ACTCAAGCAAGGTGCTAAGGTCATTGCAGCGGATATTCATGTAGAAGCGATGCGTGAACGCCTTTCTTCACTTGGCGTTG
ACTTACAAGATAAGAAGCTATGCTGTTGCGAGCTCGATGTGACTAAAGAAGAGAGTGTCAAAGCTTTCTTCAATAAGCAG
GCTCAACACATTGATGGCGCGGTCAACTCAACCTATCCTCGTAATAAAACCTACGGTAAGCACTTTTTTGACGTAAGTTT
AGACAGTTTTAATGAAAACTTGTCTCTGCATTTAGGCAGTGCTTTTCTTTTCACTCAACAATGTGCTGCTTACTTTAAGT
TGCAGCAACAGCCATTTTCGTTGGTGAATATCTCCTCCATTTATGGGGTTGTAGCACCAAAATTCGAGATTTATAACAAT
ACGCCGATGACGATGCCAGTCGAATACGCAGCGATCAAGTCGGCTATTCAACACCTCAACAAATACGTGGTGTCTTACGT
GAATGACAGCCGTTTTCGTATTAACTGTGTCAGCCCCGGTGGTATCTTTGACCATCAACCTGAAGCGTTTTTGCAAGCCT
ATAAAGAGAAAACGCATGGCGCTGGCATGTTGGATGTGGAAGAAGTGGTTGGTTCTGTACTGTTTTTGCTTTCAGAGCAG
TCACGTTATGTAACAGGACAGAACATTGTTGTAGATGATGGTTTTAGTTTGTAA

Upstream 100 bases:

>100_bases
GCAAAGTCACCAGTATCGAAGTACCAAAAGAGCGAGCGGTGGATATCGATGATATTTATGACTTTAAATTAGCCCAAGCA
ATCCTTGAGGAAACCAACTA

Downstream 100 bases:

>100_bases
TTTGGAATTGTAAATGAAAATAGTAATTATTGATTATGATATGGGTAATGTTCGTTCAATAGAAAATGCTATTAACCATA
TTGGAGACTACACAATTATA

Product: flagellin modification protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MEQLLNNKTILVAGAGGLLGTRLVPALLKQGAKVIAADIHVEAMRERLSSLGVDLQDKKLCCCELDVTKEESVKAFFNKQ
AQHIDGAVNSTYPRNKTYGKHFFDVSLDSFNENLSLHLGSAFLFTQQCAAYFKLQQQPFSLVNISSIYGVVAPKFEIYNN
TPMTMPVEYAAIKSAIQHLNKYVVSYVNDSRFRINCVSPGGIFDHQPEAFLQAYKEKTHGAGMLDVEEVVGSVLFLLSEQ
SRYVTGQNIVVDDGFSL

Sequences:

>Translated_257_residues
MEQLLNNKTILVAGAGGLLGTRLVPALLKQGAKVIAADIHVEAMRERLSSLGVDLQDKKLCCCELDVTKEESVKAFFNKQ
AQHIDGAVNSTYPRNKTYGKHFFDVSLDSFNENLSLHLGSAFLFTQQCAAYFKLQQQPFSLVNISSIYGVVAPKFEIYNN
TPMTMPVEYAAIKSAIQHLNKYVVSYVNDSRFRINCVSPGGIFDHQPEAFLQAYKEKTHGAGMLDVEEVVGSVLFLLSEQ
SRYVTGQNIVVDDGFSL
>Mature_257_residues
MEQLLNNKTILVAGAGGLLGTRLVPALLKQGAKVIAADIHVEAMRERLSSLGVDLQDKKLCCCELDVTKEESVKAFFNKQ
AQHIDGAVNSTYPRNKTYGKHFFDVSLDSFNENLSLHLGSAFLFTQQCAAYFKLQQQPFSLVNISSIYGVVAPKFEIYNN
TPMTMPVEYAAIKSAIQHLNKYVVSYVNDSRFRINCVSPGGIFDHQPEAFLQAYKEKTHGAGMLDVEEVVGSVLFLLSEQ
SRYVTGQNIVVDDGFSL

Specific function: Required for biosynthesis of LAH modification in the post-translational modification of Campylobacter coli flagellin [H]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17555706, Length=261, Percent_Identity=26.0536398467433, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI25147288, Length=265, Percent_Identity=24.9056603773585, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24639444, Length=261, Percent_Identity=26.8199233716475, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 28468; Mature: 28468

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLLNNKTILVAGAGGLLGTRLVPALLKQGAKVIAADIHVEAMRERLSSLGVDLQDKKL
CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCE
CCCELDVTKEESVKAFFNKQAQHIDGAVNSTYPRNKTYGKHFFDVSLDSFNENLSLHLGS
EEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHCCCCCEEEEECH
AFLFTQQCAAYFKLQQQPFSLVNISSIYGVVAPKFEIYNNTPMTMPVEYAAIKSAIQHLN
HHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCEEEECCCCCEECHHHHHHHHHHHHHH
KYVVSYVNDSRFRINCVSPGGIFDHQPEAFLQAYKEKTHGAGMLDVEEVVGSVLFLLSEQ
HHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCC
SRYVTGQNIVVDDGFSL
CCEECCCEEEECCCCCC
>Mature Secondary Structure
MEQLLNNKTILVAGAGGLLGTRLVPALLKQGAKVIAADIHVEAMRERLSSLGVDLQDKKL
CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCE
CCCELDVTKEESVKAFFNKQAQHIDGAVNSTYPRNKTYGKHFFDVSLDSFNENLSLHLGS
EEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHCCCCCEEEEECH
AFLFTQQCAAYFKLQQQPFSLVNISSIYGVVAPKFEIYNNTPMTMPVEYAAIKSAIQHLN
HHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCEEEECCCCCEECHHHHHHHHHHHHHH
KYVVSYVNDSRFRINCVSPGGIFDHQPEAFLQAYKEKTHGAGMLDVEEVVGSVLFLLSEQ
HHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCC
SRYVTGQNIVVDDGFSL
CCEECCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8825781 [H]