| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678490
Identifier: 37678490
GI number: 37678490
Start: 314752
End: 315870
Strand: Direct
Name: 37678490
Synonym: VV0306
Alternate gene names: NA
Gene position: 314752-315870 (Clockwise)
Preceding gene: 161486669
Following gene: 37678491
Centisome position: 9.38
GC content: 29.22
Gene sequence:
>1119_bases ATGTTTCAAGATAAACATGTGTTTTTTGTAGATGTTGAAGATAATTTTATATATTTAAATGTAGATGCTTTGATTTATAG GGCGGGCGTTGAACCTAGTAATATAGTAATTGTTTTCTTTGGAAAAAATGATGGGTTCTATAAAGTAAGAAAAATAGTGG GAGTGGAGTATTTTTTGTTTGATTATATAAATATAAAAGACGTTATTTTTTCTAAGACAATTACATTTATATCCATTAAT GCTAATAATGTTTTTTATATAAGTAAAATTATTGATATTGATACTTGCGTGTGTGATAAAACTTACATATTAATTACTGA CGATGAAGTTGAACGATGGGGGAAATGTATAGATGTTCATGGGGTTATTAAGAAAGATAAAGCTTTAAATATATCATCTG AAGAGGTTGAGGTTACAAGTAAAATAAAATGGTTTATCGGTAATTCAAATACATTTGAGGACAAGATTAGGCATGCACTA AAAAGAAATGATTTTAAACTTATAAATGCTGGAATAATTTTTGATACGTTGCCTGTTAATGAGTCAAATTGTTTTAGTGA TTTATTGTCGCGATGTGAAGCATGGAATGGGAAGGAAAAAAAGATACTAATAGGCACAAAAAAGAAATCGTTTAGTATTA GAGAAGTTAAAGCTGTAATGAGATCATTATGTAAATTTAAATTAGGGGAAGAGTATAAAGTTGTAATTATGTGGCATAAG AAAAATCGCAAACAAAGATTGTTGCTGGATTTGTACACAATATGGTTGCGACATTTTAAACAACAAACACTTGATATTTC TTATGTTACAGAACTATCTCCTCTAGCGTACACATCTCTTATCTCATCATGTTCCCATATTATTTTACAAAAAAGAGGTG GTGCTAGTACGGTTCGTACATACCTTAAATTTGGTGCAGGTGTTGTTTGCATTCCCTCCGGTACTGATAATGAATTCGGT TTTAAACGTGCTTTAGATTTAGATGTAATATCATTTGATTCTACTGATGATTTAATGAAGAAAATAATTAATTCAAAAAT AGATATAAAATATAATGAATCATGTACAAGAATGGAAGAACTTCGTTCTGCTTCCGTTTTGAGTATGCTCTACAATTAG
Upstream 100 bases:
>100_bases TGGAAAGTGAAAAATTAGTTCGCTTACCTATGTTTTATGGATTGGCTCTCTCAGAGAGAAATAAGATCATATCTACTATT TTTGATATTTTGGAGTCTTA
Downstream 100 bases:
>100_bases ATTTTTTGATATTATTGAGTATTTTAAATTAAAAATCTACAAAGGTTGTTGTGTGAAATTTAGGCAAGACATTAATGGCT TAAGGGCCATTGCAGTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MFQDKHVFFVDVEDNFIYLNVDALIYRAGVEPSNIVIVFFGKNDGFYKVRKIVGVEYFLFDYINIKDVIFSKTITFISIN ANNVFYISKIIDIDTCVCDKTYILITDDEVERWGKCIDVHGVIKKDKALNISSEEVEVTSKIKWFIGNSNTFEDKIRHAL KRNDFKLINAGIIFDTLPVNESNCFSDLLSRCEAWNGKEKKILIGTKKKSFSIREVKAVMRSLCKFKLGEEYKVVIMWHK KNRKQRLLLDLYTIWLRHFKQQTLDISYVTELSPLAYTSLISSCSHIILQKRGGASTVRTYLKFGAGVVCIPSGTDNEFG FKRALDLDVISFDSTDDLMKKIINSKIDIKYNESCTRMEELRSASVLSMLYN
Sequences:
>Translated_372_residues MFQDKHVFFVDVEDNFIYLNVDALIYRAGVEPSNIVIVFFGKNDGFYKVRKIVGVEYFLFDYINIKDVIFSKTITFISIN ANNVFYISKIIDIDTCVCDKTYILITDDEVERWGKCIDVHGVIKKDKALNISSEEVEVTSKIKWFIGNSNTFEDKIRHAL KRNDFKLINAGIIFDTLPVNESNCFSDLLSRCEAWNGKEKKILIGTKKKSFSIREVKAVMRSLCKFKLGEEYKVVIMWHK KNRKQRLLLDLYTIWLRHFKQQTLDISYVTELSPLAYTSLISSCSHIILQKRGGASTVRTYLKFGAGVVCIPSGTDNEFG FKRALDLDVISFDSTDDLMKKIINSKIDIKYNESCTRMEELRSASVLSMLYN >Mature_372_residues MFQDKHVFFVDVEDNFIYLNVDALIYRAGVEPSNIVIVFFGKNDGFYKVRKIVGVEYFLFDYINIKDVIFSKTITFISIN ANNVFYISKIIDIDTCVCDKTYILITDDEVERWGKCIDVHGVIKKDKALNISSEEVEVTSKIKWFIGNSNTFEDKIRHAL KRNDFKLINAGIIFDTLPVNESNCFSDLLSRCEAWNGKEKKILIGTKKKSFSIREVKAVMRSLCKFKLGEEYKVVIMWHK KNRKQRLLLDLYTIWLRHFKQQTLDISYVTELSPLAYTSLISSCSHIILQKRGGASTVRTYLKFGAGVVCIPSGTDNEFG FKRALDLDVISFDSTDDLMKKIINSKIDIKYNESCTRMEELRSASVLSMLYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42937; Mature: 42937
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQDKHVFFVDVEDNFIYLNVDALIYRAGVEPSNIVIVFFGKNDGFYKVRKIVGVEYFLF CCCCCEEEEEEECCCEEEEEEHHEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHEEEEH DYINIKDVIFSKTITFISINANNVFYISKIIDIDTCVCDKTYILITDDEVERWGKCIDVH HHCCHHHHHHCCEEEEEEECCCCEEEEEEEEECEEEECCCEEEEEECCHHHHCCCEEEEC GVIKKDKALNISSEEVEVTSKIKWFIGNSNTFEDKIRHALKRNDFKLINAGIIFDTLPVN CEEECCCCCCCCCHHEEEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCEEEEECCCC ESNCFSDLLSRCEAWNGKEKKILIGTKKKSFSIREVKAVMRSLCKFKLGEEYKVVIMWHK CCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC KNRKQRLLLDLYTIWLRHFKQQTLDISYVTELSPLAYTSLISSCSHIILQKRGGASTVRT CCCCHHHHHHHHHHHHHHHHHHHCCEEHHHHCCHHHHHHHHHHHHHEEEECCCCHHHHHH YLKFGAGVVCIPSGTDNEFGFKRALDLDVISFDSTDDLMKKIINSKIDIKYNESCTRMEE HHHHCCCEEEECCCCCCCCCCEEEEEEEEEEECCHHHHHHHHHCCCEEEEECCHHHHHHH LRSASVLSMLYN HHHHHHHHHHCC >Mature Secondary Structure MFQDKHVFFVDVEDNFIYLNVDALIYRAGVEPSNIVIVFFGKNDGFYKVRKIVGVEYFLF CCCCCEEEEEEECCCEEEEEEHHEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHEEEEH DYINIKDVIFSKTITFISINANNVFYISKIIDIDTCVCDKTYILITDDEVERWGKCIDVH HHCCHHHHHHCCEEEEEEECCCCEEEEEEEEECEEEECCCEEEEEECCHHHHCCCEEEEC GVIKKDKALNISSEEVEVTSKIKWFIGNSNTFEDKIRHALKRNDFKLINAGIIFDTLPVN CEEECCCCCCCCCHHEEEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCEEEEECCCC ESNCFSDLLSRCEAWNGKEKKILIGTKKKSFSIREVKAVMRSLCKFKLGEEYKVVIMWHK CCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC KNRKQRLLLDLYTIWLRHFKQQTLDISYVTELSPLAYTSLISSCSHIILQKRGGASTVRT CCCCHHHHHHHHHHHHHHHHHHHCCEEHHHHCCHHHHHHHHHHHHHEEEECCCCHHHHHH YLKFGAGVVCIPSGTDNEFGFKRALDLDVISFDSTDDLMKKIINSKIDIKYNESCTRMEE HHHHCCCEEEECCCCCCCCCCEEEEEEEEEEECCHHHHHHHHHCCCEEEEECCHHHHHHH LRSASVLSMLYN HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA