| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is dgkA [H]
Identifier: 37678480
GI number: 37678480
Start: 305420
End: 305878
Strand: Direct
Name: dgkA [H]
Synonym: VV0296
Alternate gene names: 37678480
Gene position: 305420-305878 (Clockwise)
Preceding gene: 37678477
Following gene: 37678481
Centisome position: 9.1
GC content: 47.28
Gene sequence:
>459_bases ATGCAGATACCCAAGATAAATGTAAAATACCCCTCTTTCATTGATGGCAACGATAAGGCATTCCTTTCTATGACTCAGCC CAACATAGGCAAGCCAGGCAACACTGGTATTAAGCGCATAATAAAAGCCACAGGCTACTCGATTCAGGGCTTAAAAGCAG CATTTAAACATGAGGCTGCGGTTCGTCAGGAGTTTGCTTTGCTCGTCGTTGCGATTGTGCTAGCGACTTGGCTTGATGTA TCGATGCTTGAACGTATCACGTTGCTTGCGGTGGTTGTGCTGGTGCTGATTGTTGAATTAATGAATTCAGCGGTGGAAGC GGTGGTGGATCGCATCGGCGTGGAGCATCACGAACTCAGTGGCCGAGCTAAAGACATTGGTTCTGCGGCGGTGCTGGTGG CGTTGATTTTCGCTGGTTTTACATGGCTTTATATCGTTGGTAGTCATTATTGGTGGTAA
Upstream 100 bases:
>100_bases CAAACATCACCAATGGCGGACAAACGTAGGAAACAGACGGAGTTTGGGGCTTGTTCAAAAAGCGACATAAGTTCTGCTCA AAAAAATATCTGGCTAAATT
Downstream 100 bases:
>100_bases AGCATGATTGAACAACAGCAGTTTGGTCAAAGTCGAATTTGTTACGACAGCGAATGGGTGAGTTCGCCAGAGCTGGCTTT ATTTGACCCGCAGTATTGGC
Product: diacylglycerol kinase
Products: NA
Alternate protein names: DAGK; Diglyceride kinase; DGK [H]
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MQIPKINVKYPSFIDGNDKAFLSMTQPNIGKPGNTGIKRIIKATGYSIQGLKAAFKHEAAVRQEFALLVVAIVLATWLDV SMLERITLLAVVVLVLIVELMNSAVEAVVDRIGVEHHELSGRAKDIGSAAVLVALIFAGFTWLYIVGSHYWW
Sequences:
>Translated_152_residues MQIPKINVKYPSFIDGNDKAFLSMTQPNIGKPGNTGIKRIIKATGYSIQGLKAAFKHEAAVRQEFALLVVAIVLATWLDV SMLERITLLAVVVLVLIVELMNSAVEAVVDRIGVEHHELSGRAKDIGSAAVLVALIFAGFTWLYIVGSHYWW >Mature_152_residues MQIPKINVKYPSFIDGNDKAFLSMTQPNIGKPGNTGIKRIIKATGYSIQGLKAAFKHEAAVRQEFALLVVAIVLATWLDV SMLERITLLAVVVLVLIVELMNSAVEAVVDRIGVEHHELSGRAKDIGSAAVLVALIFAGFTWLYIVGSHYWW
Specific function: Recycling of diacylglycerol produced during the turnover of membrane phospholipid [H]
COG id: COG0818
COG function: function code M; Diacylglycerol kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial diacylglycerol kinase family [H]
Homologues:
Organism=Escherichia coli, GI1790475, Length=117, Percent_Identity=58.974358974359, Blast_Score=139, Evalue=6e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000829 [H]
Pfam domain/function: PF01219 DAGK_prokar [H]
EC number: =2.7.1.107 [H]
Molecular weight: Translated: 16689; Mature: 16689
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS01069 DAGK_PROKAR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIPKINVKYPSFIDGNDKAFLSMTQPNIGKPGNTGIKRIIKATGYSIQGLKAAFKHEAA CCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH VRQEFALLVVAIVLATWLDVSMLERITLLAVVVLVLIVELMNSAVEAVVDRIGVEHHELS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC GRAKDIGSAAVLVALIFAGFTWLYIVGSHYWW CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQIPKINVKYPSFIDGNDKAFLSMTQPNIGKPGNTGIKRIIKATGYSIQGLKAAFKHEAA CCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH VRQEFALLVVAIVLATWLDVSMLERITLLAVVVLVLIVELMNSAVEAVVDRIGVEHHELS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC GRAKDIGSAAVLVALIFAGFTWLYIVGSHYWW CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]