Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is dgkA [H]

Identifier: 37678480

GI number: 37678480

Start: 305420

End: 305878

Strand: Direct

Name: dgkA [H]

Synonym: VV0296

Alternate gene names: 37678480

Gene position: 305420-305878 (Clockwise)

Preceding gene: 37678477

Following gene: 37678481

Centisome position: 9.1

GC content: 47.28

Gene sequence:

>459_bases
ATGCAGATACCCAAGATAAATGTAAAATACCCCTCTTTCATTGATGGCAACGATAAGGCATTCCTTTCTATGACTCAGCC
CAACATAGGCAAGCCAGGCAACACTGGTATTAAGCGCATAATAAAAGCCACAGGCTACTCGATTCAGGGCTTAAAAGCAG
CATTTAAACATGAGGCTGCGGTTCGTCAGGAGTTTGCTTTGCTCGTCGTTGCGATTGTGCTAGCGACTTGGCTTGATGTA
TCGATGCTTGAACGTATCACGTTGCTTGCGGTGGTTGTGCTGGTGCTGATTGTTGAATTAATGAATTCAGCGGTGGAAGC
GGTGGTGGATCGCATCGGCGTGGAGCATCACGAACTCAGTGGCCGAGCTAAAGACATTGGTTCTGCGGCGGTGCTGGTGG
CGTTGATTTTCGCTGGTTTTACATGGCTTTATATCGTTGGTAGTCATTATTGGTGGTAA

Upstream 100 bases:

>100_bases
CAAACATCACCAATGGCGGACAAACGTAGGAAACAGACGGAGTTTGGGGCTTGTTCAAAAAGCGACATAAGTTCTGCTCA
AAAAAATATCTGGCTAAATT

Downstream 100 bases:

>100_bases
AGCATGATTGAACAACAGCAGTTTGGTCAAAGTCGAATTTGTTACGACAGCGAATGGGTGAGTTCGCCAGAGCTGGCTTT
ATTTGACCCGCAGTATTGGC

Product: diacylglycerol kinase

Products: NA

Alternate protein names: DAGK; Diglyceride kinase; DGK [H]

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MQIPKINVKYPSFIDGNDKAFLSMTQPNIGKPGNTGIKRIIKATGYSIQGLKAAFKHEAAVRQEFALLVVAIVLATWLDV
SMLERITLLAVVVLVLIVELMNSAVEAVVDRIGVEHHELSGRAKDIGSAAVLVALIFAGFTWLYIVGSHYWW

Sequences:

>Translated_152_residues
MQIPKINVKYPSFIDGNDKAFLSMTQPNIGKPGNTGIKRIIKATGYSIQGLKAAFKHEAAVRQEFALLVVAIVLATWLDV
SMLERITLLAVVVLVLIVELMNSAVEAVVDRIGVEHHELSGRAKDIGSAAVLVALIFAGFTWLYIVGSHYWW
>Mature_152_residues
MQIPKINVKYPSFIDGNDKAFLSMTQPNIGKPGNTGIKRIIKATGYSIQGLKAAFKHEAAVRQEFALLVVAIVLATWLDV
SMLERITLLAVVVLVLIVELMNSAVEAVVDRIGVEHHELSGRAKDIGSAAVLVALIFAGFTWLYIVGSHYWW

Specific function: Recycling of diacylglycerol produced during the turnover of membrane phospholipid [H]

COG id: COG0818

COG function: function code M; Diacylglycerol kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial diacylglycerol kinase family [H]

Homologues:

Organism=Escherichia coli, GI1790475, Length=117, Percent_Identity=58.974358974359, Blast_Score=139, Evalue=6e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000829 [H]

Pfam domain/function: PF01219 DAGK_prokar [H]

EC number: =2.7.1.107 [H]

Molecular weight: Translated: 16689; Mature: 16689

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS01069 DAGK_PROKAR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIPKINVKYPSFIDGNDKAFLSMTQPNIGKPGNTGIKRIIKATGYSIQGLKAAFKHEAA
CCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
VRQEFALLVVAIVLATWLDVSMLERITLLAVVVLVLIVELMNSAVEAVVDRIGVEHHELS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC
GRAKDIGSAAVLVALIFAGFTWLYIVGSHYWW
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQIPKINVKYPSFIDGNDKAFLSMTQPNIGKPGNTGIKRIIKATGYSIQGLKAAFKHEAA
CCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
VRQEFALLVVAIVLATWLDVSMLERITLLAVVVLVLIVELMNSAVEAVVDRIGVEHHELS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC
GRAKDIGSAAVLVALIFAGFTWLYIVGSHYWW
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]