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The map label for this gene is rfaF [C]

Identifier: 37678477

GI number: 37678477

Start: 302547

End: 303581

Strand: Direct

Name: rfaF [C]

Synonym: VV0293

Alternate gene names: 37678477

Gene position: 302547-303581 (Clockwise)

Preceding gene: 37678475

Following gene: 37678480

Centisome position: 9.02

GC content: 47.92

Gene sequence:

>1035_bases
ATGAAAAAAATACTGGTTATCCGGAATGATAAAATTGGCGACTTTATGCTTGCGTGGCCAAGTTTCGCCATGCTCAAGCA
ATCGATGCCAGAAGCGCACATTACCGCTTTAGTACCAAGTTATACGCAAGAGTTGGCGCGACTTTGCCCATGGATTGACG
ATGTATTGTTGGACCCAACTGAAAAGGCAGGCAAAGAAGCCACGAAGCAGTTGGTTCAGGAGATCAAGTCACGTCAGTTT
GATGCCTCAATCAACTTGTTTTCGACAACGTATAATGCGCTACTCGTGTGGAAAGCGGGCATTAAGTATCGCTTGGCACC
TGCAACAAAAATCGCACAGATTTTTTATAACCGCAGAATTAAGCAGAAACGCTCACAATCCGCCAAACCGGAATATCAGT
ACAATCTTGATCTGATTCGCGCCTTCTTGAATGAGCAAAAAGTCACGGCAGTTGAGCCGCAAGCGCCTTTTCTTTTGTTT
GATGAAACCGAATTGAGTGTGCAGAAACTCAAGCTCAGTGAACAGCTCAGTATTGAAGCGCATAAGCCTTGGGTGATGGT
GCATGCCGGCACGGGCGGCTCAGCCAATAACCTGACATTGGCACAATATGCTGAGTTGCTAAAAGGAATCGAGCAAGATT
TTCAACTGATTGTCACGGCGGGGCCGGGGGAAACGGAAAAAGCACAACAGCTATTGAAAGAATACGCTCAGTTAGGTGGC
CAAGGGGTGGTGTATGACAAGAATGAAGGCCTTGTCGACTTTACGCGCTCCATTGCCTGCGCTGATCTATTTATTGCTGG
CTCAACAGGACCGTTGCATATTGCGGCGACCTTGGATGTTCCAACTGTAGGATTTTTCCCAAGTAAGCGTTCTTCAACGC
CATTACGCTGGAGACCACTCAACTCAGAAGGACGCCATCTGGCGTTTTGCCCACCAAAAGGTGGCGGTGAAGCAATGGAA
GCTGATATGAGCCGCATCGACATTGATGCGGCGCTGGTACAGCTTAATCCTTGGGTTTCTCCGTACTTGTCCTGA

Upstream 100 bases:

>100_bases
GCTTTTTTCGACACGTTGGAATACTCTTCAGCTCAAAATGTCTACATGCTATCAATATGCATGTATCATGACGACATAAA
AATCAAACGGCAGCAGAACA

Downstream 100 bases:

>100_bases
TCCACAAGTCCGCGTACTTCACCAGTGTGGAGTGCGCGGAAAGTAGCGACAGCAGAAAGCCCTGCTTACCATCCAAAAAG
CCCGCTTTGACAATGTACAT

Product: ADP-heptose:LPS heptosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MKKILVIRNDKIGDFMLAWPSFAMLKQSMPEAHITALVPSYTQELARLCPWIDDVLLDPTEKAGKEATKQLVQEIKSRQF
DASINLFSTTYNALLVWKAGIKYRLAPATKIAQIFYNRRIKQKRSQSAKPEYQYNLDLIRAFLNEQKVTAVEPQAPFLLF
DETELSVQKLKLSEQLSIEAHKPWVMVHAGTGGSANNLTLAQYAELLKGIEQDFQLIVTAGPGETEKAQQLLKEYAQLGG
QGVVYDKNEGLVDFTRSIACADLFIAGSTGPLHIAATLDVPTVGFFPSKRSSTPLRWRPLNSEGRHLAFCPPKGGGEAME
ADMSRIDIDAALVQLNPWVSPYLS

Sequences:

>Translated_344_residues
MKKILVIRNDKIGDFMLAWPSFAMLKQSMPEAHITALVPSYTQELARLCPWIDDVLLDPTEKAGKEATKQLVQEIKSRQF
DASINLFSTTYNALLVWKAGIKYRLAPATKIAQIFYNRRIKQKRSQSAKPEYQYNLDLIRAFLNEQKVTAVEPQAPFLLF
DETELSVQKLKLSEQLSIEAHKPWVMVHAGTGGSANNLTLAQYAELLKGIEQDFQLIVTAGPGETEKAQQLLKEYAQLGG
QGVVYDKNEGLVDFTRSIACADLFIAGSTGPLHIAATLDVPTVGFFPSKRSSTPLRWRPLNSEGRHLAFCPPKGGGEAME
ADMSRIDIDAALVQLNPWVSPYLS
>Mature_344_residues
MKKILVIRNDKIGDFMLAWPSFAMLKQSMPEAHITALVPSYTQELARLCPWIDDVLLDPTEKAGKEATKQLVQEIKSRQF
DASINLFSTTYNALLVWKAGIKYRLAPATKIAQIFYNRRIKQKRSQSAKPEYQYNLDLIRAFLNEQKVTAVEPQAPFLLF
DETELSVQKLKLSEQLSIEAHKPWVMVHAGTGGSANNLTLAQYAELLKGIEQDFQLIVTAGPGETEKAQQLLKEYAQLGG
QGVVYDKNEGLVDFTRSIACADLFIAGSTGPLHIAATLDVPTVGFFPSKRSSTPLRWRPLNSEGRHLAFCPPKGGGEAME
ADMSRIDIDAALVQLNPWVSPYLS

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38297; Mature: 38297

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILVIRNDKIGDFMLAWPSFAMLKQSMPEAHITALVPSYTQELARLCPWIDDVLLDPT
CCEEEEEECCCCCCEEEECCHHHHHHHCCCHHHHHHCCHHHHHHHHHHCCHHHHHHCCCC
EKAGKEATKQLVQEIKSRQFDASINLFSTTYNALLVWKAGIKYRLAPATKIAQIFYNRRI
HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEECCCEEEECCHHHHHHHHHHHHH
KQKRSQSAKPEYQYNLDLIRAFLNEQKVTAVEPQAPFLLFDETELSVQKLKLSEQLSIEA
HHHHHCCCCCCEEECHHHHHHHHCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHCEEEE
HKPWVMVHAGTGGSANNLTLAQYAELLKGIEQDFQLIVTAGPGETEKAQQLLKEYAQLGG
CCCEEEEECCCCCCCCCEEHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
QGVVYDKNEGLVDFTRSIACADLFIAGSTGPLHIAATLDVPTVGFFPSKRSSTPLRWRPL
CEEEEECCCCHHHHHHHHHEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEC
NSEGRHLAFCPPKGGGEAMEADMSRIDIDAALVQLNPWVSPYLS
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCC
>Mature Secondary Structure
MKKILVIRNDKIGDFMLAWPSFAMLKQSMPEAHITALVPSYTQELARLCPWIDDVLLDPT
CCEEEEEECCCCCCEEEECCHHHHHHHCCCHHHHHHCCHHHHHHHHHHCCHHHHHHCCCC
EKAGKEATKQLVQEIKSRQFDASINLFSTTYNALLVWKAGIKYRLAPATKIAQIFYNRRI
HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEECCCEEEECCHHHHHHHHHHHHH
KQKRSQSAKPEYQYNLDLIRAFLNEQKVTAVEPQAPFLLFDETELSVQKLKLSEQLSIEA
HHHHHCCCCCCEEECHHHHHHHHCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHCEEEE
HKPWVMVHAGTGGSANNLTLAQYAELLKGIEQDFQLIVTAGPGETEKAQQLLKEYAQLGG
CCCEEEEECCCCCCCCCEEHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
QGVVYDKNEGLVDFTRSIACADLFIAGSTGPLHIAATLDVPTVGFFPSKRSSTPLRWRPL
CEEEEECCCCHHHHHHHHHEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEC
NSEGRHLAFCPPKGGGEAMEADMSRIDIDAALVQLNPWVSPYLS
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]