Click here to switch to the map view.

The map label for this gene is alpA [C]

Identifier: 37678446

GI number: 37678446

Start: 272326

End: 272583

Strand: Direct

Name: alpA [C]

Synonym: VV0262

Alternate gene names: 37678446

Gene position: 272326-272583 (Clockwise)

Preceding gene: 37678444

Following gene: 37678447

Centisome position: 8.12

GC content: 54.65

Gene sequence:

>258_bases
GTGAGGAAGCAAACGATGAACCCAACGACACAATCACCCACAAACTCAGTACACCCAGCGCGTCAGCAGCGGATTTTGCG
CTTGCCCGAGGTAAAGGCCAAAACAGGCTTTGGCCGCAGCACCATTTATGCCCTGATGGCCAGCGGTGAATTTCCACGTT
CCATTCGTATTGGTGCGCGTGCCGTGGGCTGGTTAGAAAGCGATATCGACCAGTGGATTGAAACCCGCCGTATCGGTGCT
GCTTATGGCCGTGGATAA

Upstream 100 bases:

>100_bases
CTAGCTACTTGTACCCTCAGAAAGCTACACGATCTGGGCATTTATCTGCCTACTGCGTCCGTTTAGTACTGGCAAACTCC
TAACTGAACTTAACAGATCA

Downstream 100 bases:

>100_bases
ACCATCAGCATCAAACCAATTACCTGTCGGTGATATGCATAGCAACATGCCATCATTACCAGCTGGTTTTGCCTATAACG
CGCAAAACTGGCTGGTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Phage Transcriptional Regulator; Phage-Related Protein

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MRKQTMNPTTQSPTNSVHPARQQRILRLPEVKAKTGFGRSTIYALMASGEFPRSIRIGARAVGWLESDIDQWIETRRIGA
AYGRG

Sequences:

>Translated_85_residues
MRKQTMNPTTQSPTNSVHPARQQRILRLPEVKAKTGFGRSTIYALMASGEFPRSIRIGARAVGWLESDIDQWIETRRIGA
AYGRG
>Mature_85_residues
MRKQTMNPTTQSPTNSVHPARQQRILRLPEVKAKTGFGRSTIYALMASGEFPRSIRIGARAVGWLESDIDQWIETRRIGA
AYGRG

Specific function: Positive Regulator Of The Expression Of The Slpa Gene. [C]

COG id: COG3311

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9543; Mature: 9543

Theoretical pI: Translated: 11.91; Mature: 11.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKQTMNPTTQSPTNSVHPARQQRILRLPEVKAKTGFGRSTIYALMASGEFPRSIRIGAR
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCHH
AVGWLESDIDQWIETRRIGAAYGRG
HHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRKQTMNPTTQSPTNSVHPARQQRILRLPEVKAKTGFGRSTIYALMASGEFPRSIRIGAR
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCHH
AVGWLESDIDQWIETRRIGAAYGRG
HHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA