| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678385
Identifier: 37678385
GI number: 37678385
Start: 214970
End: 215491
Strand: Direct
Name: 37678385
Synonym: VV0201
Alternate gene names: NA
Gene position: 214970-215491 (Clockwise)
Preceding gene: 37678384
Following gene: 37678387
Centisome position: 6.41
GC content: 53.45
Gene sequence:
>522_bases ATGGATTTGGTGATCATCAGTGGTGGCCCCGGAGCGGGTAAAACCACGTTAATTAATGCGCTGTCGGCGCAGGGTTACAT GACTTTTGCAGAAGGCTCTCGCACATTGATCGAGGAGCAAAGTGTACGCGCTGACGGCATTCTGCCCTGGACCAATCTTC CCGCGTTCGCTGAGTTGTGTTTGGCGTTGATGAGTGAGCAAAAGCGCCAAGCCAGTGGCGCCACAGTCGCGTTTTTCGAC CGCGCCATTCCCGATATCATTGGCTATCTCAAAATGGGGCGCTGTGAGGTGCCCACCACGTTGCATCAGGCCAGCCAAGG CTATTACGCCAAAGTGTTCGTCTGCAAACCAGAGTCGTCCATTTATGTCCAAGACGAAGTGCGGCCACACACGTTTGCCG AAGCGTTGCAGATTCATCAAATGTTGGTGGAATGCTACCGTGATCTAGGCTATCAAGTGGTGGAAGTGCCGTGGGGAAGT GTGGCTGAGCGAGTGGCGTTTATTCTGCAGTATGTAAGGTGA
Upstream 100 bases:
>100_bases CGTGCTTCTCGCGAAGCGAAGTAATTACGCTTTCGGTTAATTAAATGAGAAACCCTGAGTTGGCAACGACTCAGGGTTTT TGTTTATTTAGGAGCAAAAC
Downstream 100 bases:
>100_bases ACAGCCTCTAGCGAGGCGCAACAAAAAAACCTCCCGAAAGCAGGAGGTTTGAGAAGCTTACTGCTGGTTGAGTTTTTGCA AGAACTTGTCGGATTCGGCT
Product: ATPase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MDLVIISGGPGAGKTTLINALSAQGYMTFAEGSRTLIEEQSVRADGILPWTNLPAFAELCLALMSEQKRQASGATVAFFD RAIPDIIGYLKMGRCEVPTTLHQASQGYYAKVFVCKPESSIYVQDEVRPHTFAEALQIHQMLVECYRDLGYQVVEVPWGS VAERVAFILQYVR
Sequences:
>Translated_173_residues MDLVIISGGPGAGKTTLINALSAQGYMTFAEGSRTLIEEQSVRADGILPWTNLPAFAELCLALMSEQKRQASGATVAFFD RAIPDIIGYLKMGRCEVPTTLHQASQGYYAKVFVCKPESSIYVQDEVRPHTFAEALQIHQMLVECYRDLGYQVVEVPWGS VAERVAFILQYVR >Mature_173_residues MDLVIISGGPGAGKTTLINALSAQGYMTFAEGSRTLIEEQSVRADGILPWTNLPAFAELCLALMSEQKRQASGATVAFFD RAIPDIIGYLKMGRCEVPTTLHQASQGYYAKVFVCKPESSIYVQDEVRPHTFAEALQIHQMLVECYRDLGYQVVEVPWGS VAERVAFILQYVR
Specific function: Unknown
COG id: COG3911
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19138; Mature: 19138
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLVIISGGPGAGKTTLINALSAQGYMTFAEGSRTLIEEQSVRADGILPWTNLPAFAELC CEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCHHHHHHH LALMSEQKRQASGATVAFFDRAIPDIIGYLKMGRCEVPTTLHQASQGYYAKVFVCKPESS HHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCC IYVQDEVRPHTFAEALQIHQMLVECYRDLGYQVVEVPWGSVAERVAFILQYVR EEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHC >Mature Secondary Structure MDLVIISGGPGAGKTTLINALSAQGYMTFAEGSRTLIEEQSVRADGILPWTNLPAFAELC CEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCHHHHHHH LALMSEQKRQASGATVAFFDRAIPDIIGYLKMGRCEVPTTLHQASQGYYAKVFVCKPESS HHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCC IYVQDEVRPHTFAEALQIHQMLVECYRDLGYQVVEVPWGSVAERVAFILQYVR EEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA