Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37678343

Identifier: 37678343

GI number: 37678343

Start: 164990

End: 166798

Strand: Direct

Name: 37678343

Synonym: VV0159

Alternate gene names: NA

Gene position: 164990-166798 (Clockwise)

Preceding gene: 37678342

Following gene: 37678346

Centisome position: 4.92

GC content: 32.67

Gene sequence:

>1809_bases
ATGCCCATAAAAAAAAGATATGTTTTCTTGATTTTTATTAGCTTAATCATAAACGGCTGCAATTCAGAAGATAATTCATT
GAATAATGTTAAAGAAAATGAAATAAGATCTATTCAAATAACTTTTTCACCAAAAACTAAAGGCATTAGTTCGTATTCAA
TAGCAAAAGGAAATTGCATTAAATTCATAGCTACTGCTATTTATTTAGACAATTCAAGTGTTGATGTAACAAAAGATGTA
ATTTGGAAAAGTGAAGCGTCAAATGTTTTAGCTATTGATAGTAAAGGTGAAGCAAAAGGAAAAGATATAGGGTCATCAAA
AATACAAGCATCAATAGGAAATGTTCATAGTAACGCTGTAAACATAGAAGTTACTGATGCAATTATCACTTCAATTCAAA
TAACTCCAAGTGCAGCCTCATTAGCTAAAGGGCAAACACAACCTTTAACTGCAACCGCGATATTTAGCGATGATACATCC
TTTCCTGTAACAGAATCCGTAACTTGGAAATCAGAAGATACTAATATAGCAACAGTTACAAATAAAGGAGTTTTAAATGC
GATTAACTCTGGAATCGTTGAAATTTTTGCTAACAAAGATGGTGTAACCAGTAACGCTGTAAACATAGAAGTTACTGATG
CAATCATCACTTCAATTCAAATAACTCCAAGTGCAGCCTCATTAGCTAAAGGGCAAACACAACCTTTAACTGCAACCGCG
ATATTTAGCGATGATACATCCTTTCCTGTAACAGAGTCCGTAACTTGGAAATCAGAAGATACTAATATAGCAACAGTTAC
AAATAAAGGAGTTTTAAATGCGATTAACTCTGGAATCGTTGAAATTTTTGCTAACAAAGATGGTGTAGCCAGTAACGCTG
TAAACATAGAAGTTACTGATGCAATCATCACTTCAATTCAAATAACTCCAAGTGCAGCCTCATTAGCTAAAGGGCAAACA
CAAACTTTAACTGCAACCGCGATATTTAGCGATGATACATCCTTTCCTGTAACAGAGTCCGTAACTTGGAAATCAGAAGA
TACTAATATAGCAACAGTTACAAATAAAGGAGTTTTAAATGCGATTAACTCTGGAATCGTTGAAATTTTTGCTAACAAAG
ATGGTGTAACCAGTAACGCTGTAAACATAGAAGTTACTGATTTTTTGAGTAAGCACTTCTCAATTGATGTTTACGACACC
AATAATAACACTTTCTCTTCAAGAGAGATTACTCAAAGTAATAACAATAAATTTAATGGTAATGGATTTAGCATTGCTCT
TTTAGGCAATGAGTTTAAAGTAATCCCTATAAGTGACCAAAGAATAATAAGCGAACGCTCACAATCAATTTATGATGAGG
ATAATAGTATCATCGGTTTTATTGCAGAAGTCGCCGTATCTTCAGAAATTGACGATCCAAGTATAGATTATACTTATATT
TCAATCTATGAAAACAGAACCTCCCAAAATAAATTAAATGGAATTTATTCAGGAAAATATTATTTCCGCCGGACTCCTGG
AGCAAGAGCTAGCATTATTGACATTAGCTTTGATCTAAACAATGAAACATGTTTTGTTGATTATGGCGGTTTTCCATTTT
TAAAATGCAGTGATGTATACATAACTAATGGTCAGTTAACTGCGGTGCTTGAATCTATCGATAACGGGTCTAAATTATTT
TACGGTAAAATTCAAGCTAATATTTATGGTAAAAATAACAACAATATAAGTGGCTTTGTGATTGATAAAAATGTTGGGAA
TGGTGGAGTTTACAGCTCTGACATTTTAATTTTAAATAAAAATCGGTAA

Upstream 100 bases:

>100_bases
GTGGTTTATTCCTGAATTAGCTTCTATATGTCAAGAGAATCGAAGTTATATAGAGGTTTATTATAATGACAGTAACAATT
ACCAATCAAGGTTTAATTAA

Downstream 100 bases:

>100_bases
CCCGTGATCATTGAAGTTTATTTATCTATAATCAGGATTATGTTATGCACCATGAAAATGTTACCCATATTTGAAAGTGT
CAGCCACAAAGCCTGGTTAG

Product: surface protein

Products: NA

Alternate protein names: Surface Protein; Ig Domain Domain Protein; Ig Domain Protein Group 2 Domain Protein; Ig-Like Domain-Containing Protein; Ig-Like Repeat-Containing Protein; Protein With A Bacterial Immunoglobulin-Like Domain; Surface/Cell-Adhesion Protein; Peptidase S8 And; Cell Adhesion Protein; YVTN Beta-Propeller Repeat-Containing Protein; 1 2-A-L-Fucosidase; LigB Lipoprotein; LigB-Like Protein; Bacterial Ig-Like Domain; CHU Large Protein; Extracellular Serine Protease; Ligc Protein

Number of amino acids: Translated: 602; Mature: 601

Protein sequence:

>602_residues
MPIKKRYVFLIFISLIINGCNSEDNSLNNVKENEIRSIQITFSPKTKGISSYSIAKGNCIKFIATAIYLDNSSVDVTKDV
IWKSEASNVLAIDSKGEAKGKDIGSSKIQASIGNVHSNAVNIEVTDAIITSIQITPSAASLAKGQTQPLTATAIFSDDTS
FPVTESVTWKSEDTNIATVTNKGVLNAINSGIVEIFANKDGVTSNAVNIEVTDAIITSIQITPSAASLAKGQTQPLTATA
IFSDDTSFPVTESVTWKSEDTNIATVTNKGVLNAINSGIVEIFANKDGVASNAVNIEVTDAIITSIQITPSAASLAKGQT
QTLTATAIFSDDTSFPVTESVTWKSEDTNIATVTNKGVLNAINSGIVEIFANKDGVTSNAVNIEVTDFLSKHFSIDVYDT
NNNTFSSREITQSNNNKFNGNGFSIALLGNEFKVIPISDQRIISERSQSIYDEDNSIIGFIAEVAVSSEIDDPSIDYTYI
SIYENRTSQNKLNGIYSGKYYFRRTPGARASIIDISFDLNNETCFVDYGGFPFLKCSDVYITNGQLTAVLESIDNGSKLF
YGKIQANIYGKNNNNISGFVIDKNVGNGGVYSSDILILNKNR

Sequences:

>Translated_602_residues
MPIKKRYVFLIFISLIINGCNSEDNSLNNVKENEIRSIQITFSPKTKGISSYSIAKGNCIKFIATAIYLDNSSVDVTKDV
IWKSEASNVLAIDSKGEAKGKDIGSSKIQASIGNVHSNAVNIEVTDAIITSIQITPSAASLAKGQTQPLTATAIFSDDTS
FPVTESVTWKSEDTNIATVTNKGVLNAINSGIVEIFANKDGVTSNAVNIEVTDAIITSIQITPSAASLAKGQTQPLTATA
IFSDDTSFPVTESVTWKSEDTNIATVTNKGVLNAINSGIVEIFANKDGVASNAVNIEVTDAIITSIQITPSAASLAKGQT
QTLTATAIFSDDTSFPVTESVTWKSEDTNIATVTNKGVLNAINSGIVEIFANKDGVTSNAVNIEVTDFLSKHFSIDVYDT
NNNTFSSREITQSNNNKFNGNGFSIALLGNEFKVIPISDQRIISERSQSIYDEDNSIIGFIAEVAVSSEIDDPSIDYTYI
SIYENRTSQNKLNGIYSGKYYFRRTPGARASIIDISFDLNNETCFVDYGGFPFLKCSDVYITNGQLTAVLESIDNGSKLF
YGKIQANIYGKNNNNISGFVIDKNVGNGGVYSSDILILNKNR
>Mature_601_residues
PIKKRYVFLIFISLIINGCNSEDNSLNNVKENEIRSIQITFSPKTKGISSYSIAKGNCIKFIATAIYLDNSSVDVTKDVI
WKSEASNVLAIDSKGEAKGKDIGSSKIQASIGNVHSNAVNIEVTDAIITSIQITPSAASLAKGQTQPLTATAIFSDDTSF
PVTESVTWKSEDTNIATVTNKGVLNAINSGIVEIFANKDGVTSNAVNIEVTDAIITSIQITPSAASLAKGQTQPLTATAI
FSDDTSFPVTESVTWKSEDTNIATVTNKGVLNAINSGIVEIFANKDGVASNAVNIEVTDAIITSIQITPSAASLAKGQTQ
TLTATAIFSDDTSFPVTESVTWKSEDTNIATVTNKGVLNAINSGIVEIFANKDGVTSNAVNIEVTDFLSKHFSIDVYDTN
NNTFSSREITQSNNNKFNGNGFSIALLGNEFKVIPISDQRIISERSQSIYDEDNSIIGFIAEVAVSSEIDDPSIDYTYIS
IYENRTSQNKLNGIYSGKYYFRRTPGARASIIDISFDLNNETCFVDYGGFPFLKCSDVYITNGQLTAVLESIDNGSKLFY
GKIQANIYGKNNNNISGFVIDKNVGNGGVYSSDILILNKNR

Specific function: Unknown

COG id: COG5492

COG function: function code N; Bacterial surface proteins containing Ig-like domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64739; Mature: 64607

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIKKRYVFLIFISLIINGCNSEDNSLNNVKENEIRSIQITFSPKTKGISSYSIAKGNCI
CCCCHHHHHEEEHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCHH
KFIATAIYLDNSSVDVTKDVIWKSEASNVLAIDSKGEAKGKDIGSSKIQASIGNVHSNAV
EEEEEEEEECCCCCCEEHHHEEECCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCEE
NIEVTDAIITSIQITPSAASLAKGQTQPLTATAIFSDDTSFPVTESVTWKSEDTNIATVT
EEEEEEEEEEEEEECCCHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEEEE
NKGVLNAINSGIVEIFANKDGVTSNAVNIEVTDAIITSIQITPSAASLAKGQTQPLTATA
CCCHHHHHCCCEEEEEECCCCCCCCEEEEEEEEEEEEEEEECCCHHHHHCCCCCCEEEEE
IFSDDTSFPVTESVTWKSEDTNIATVTNKGVLNAINSGIVEIFANKDGVASNAVNIEVTD
EEECCCCCCCCCEEEECCCCCEEEEEECCCHHHHHCCCEEEEEECCCCCCCCEEEEEEEE
AIITSIQITPSAASLAKGQTQTLTATAIFSDDTSFPVTESVTWKSEDTNIATVTNKGVLN
EEEEEEEECCCHHHHHCCCCEEEEEEEEEECCCCCCCCCEEEECCCCCEEEEEECCCHHH
AINSGIVEIFANKDGVTSNAVNIEVTDFLSKHFSIDVYDTNNNTFSSREITQSNNNKFNG
HHCCCEEEEEECCCCCCCCEEEEEEHHHHHCCEEEEEEECCCCEECCCEEECCCCCEECC
NGFSIALLGNEFKVIPISDQRIISERSQSIYDEDNSIIGFIAEVAVSSEIDDPSIDYTYI
CCEEEEEECCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCCCCCEEEE
SIYENRTSQNKLNGIYSGKYYFRRTPGARASIIDISFDLNNETCFVDYGGFPFLKCSDVY
EEEECCCCCCCCCEEECCEEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCEEEEEEEE
ITNGQLTAVLESIDNGSKLFYGKIQANIYGKNNNNISGFVIDKNVGNGGVYSSDILILNK
EECCEEEEEEECCCCCCEEEEEEEEEEEEECCCCCEEEEEEECCCCCCCEEECEEEEEEC
NR
CC
>Mature Secondary Structure 
PIKKRYVFLIFISLIINGCNSEDNSLNNVKENEIRSIQITFSPKTKGISSYSIAKGNCI
CCCHHHHHEEEHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCHH
KFIATAIYLDNSSVDVTKDVIWKSEASNVLAIDSKGEAKGKDIGSSKIQASIGNVHSNAV
EEEEEEEEECCCCCCEEHHHEEECCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCEE
NIEVTDAIITSIQITPSAASLAKGQTQPLTATAIFSDDTSFPVTESVTWKSEDTNIATVT
EEEEEEEEEEEEEECCCHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEEEE
NKGVLNAINSGIVEIFANKDGVTSNAVNIEVTDAIITSIQITPSAASLAKGQTQPLTATA
CCCHHHHHCCCEEEEEECCCCCCCCEEEEEEEEEEEEEEEECCCHHHHHCCCCCCEEEEE
IFSDDTSFPVTESVTWKSEDTNIATVTNKGVLNAINSGIVEIFANKDGVASNAVNIEVTD
EEECCCCCCCCCEEEECCCCCEEEEEECCCHHHHHCCCEEEEEECCCCCCCCEEEEEEEE
AIITSIQITPSAASLAKGQTQTLTATAIFSDDTSFPVTESVTWKSEDTNIATVTNKGVLN
EEEEEEEECCCHHHHHCCCCEEEEEEEEEECCCCCCCCCEEEECCCCCEEEEEECCCHHH
AINSGIVEIFANKDGVTSNAVNIEVTDFLSKHFSIDVYDTNNNTFSSREITQSNNNKFNG
HHCCCEEEEEECCCCCCCCEEEEEEHHHHHCCEEEEEEECCCCEECCCEEECCCCCEECC
NGFSIALLGNEFKVIPISDQRIISERSQSIYDEDNSIIGFIAEVAVSSEIDDPSIDYTYI
CCEEEEEECCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCCCCCEEEE
SIYENRTSQNKLNGIYSGKYYFRRTPGARASIIDISFDLNNETCFVDYGGFPFLKCSDVY
EEEECCCCCCCCCEEECCEEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCEEEEEEEE
ITNGQLTAVLESIDNGSKLFYGKIQANIYGKNNNNISGFVIDKNVGNGGVYSSDILILNK
EECCEEEEEEECCCCCCEEEEEEEEEEEEECCCCCEEEEEEECCCCCCCEEECEEEEEEC
NR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA