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The map label for this gene is yhbO [H]

Identifier: 37678338

GI number: 37678338

Start: 161096

End: 161881

Strand: Direct

Name: yhbO [H]

Synonym: VV0154

Alternate gene names: 37678338

Gene position: 161096-161881 (Clockwise)

Preceding gene: 37678337

Following gene: 37678339

Centisome position: 4.8

GC content: 29.9

Gene sequence:

>786_bases
ATGAAATTAAAAACTATTATATTAATAATTGGTTTTTTATCATCTCCTAGTATTGCTTTTGCTAATGAAAATAAAGTTGA
TGTATATGATTTAGTTTCAACTAGTTCTAATGTCCCGACATTAGATACAGTAAAACTTATTACAGCTGATGGAGTATTAA
ACAAAGAGTTAAAAGAATTTATGCTTAAAAAGCATAATAAGCAAGTTTTGAAAGATAAAAAAATTGCTATATTAGCAACT
GATGGGGTTGAAGAGCTAGAAATTTTGGTTCCATTAAATTATTTGAGAGAAGTTGGAGCTAATGTTACTATTGTTGCACC
AAGAAAAAAAATTTACCCAGAAACATTGGGACTAAAAATTCCAGAAAATCGTCGTACACATATTATGACTGTAAGGCTAA
TGGAAAATTCAGGTTGGTTAAAAATAGACAAATATATCGATGAAGTTTCTTTTGATGATTTTGATGGTCTCGTTTTACCT
GGTGGTGCTTGGAATCCAGACTTCCTAAGAACTGATGTTGAAGCTCAAAACCTTGTTAGAGAAATTGTAAATTCTAATAA
GCCTCTTGCAACTATATGTCATGGTCCATTAGTTTTAATCAATTCGGGGTTAGTTAAAGATAGGAAAATAACTGGTTACT
GGGCTATCATGAAAGATTTAGAAAATGCAGGAGCTAAAGTATATGATCAACCTGTTGTAATTGACGGAAATTTAATTTCT
AGTAGATTCCCTTATGATTTACCTAGATTGATGAACTCATTCACAGAAAAATTATTAAATAATTAA

Upstream 100 bases:

>100_bases
TAAAAATAAAATAAACAATGAATTTGATGCTTTTGTTTACCTTAGAAAATTAAAAGACAAATTTAATTCAATTTAAAAAT
ATAAATAAAGGATAAAAATT

Downstream 100 bases:

>100_bases
TTTCATAAATCTTTATGAGCTTATTAAGGATATTAATATGTGTAAATTGTTTGTAAGGGGAAATCAAGCCTTATGGTCAA
GTGTAACGAGATCTTTACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKLKTIILIIGFLSSPSIAFANENKVDVYDLVSTSSNVPTLDTVKLITADGVLNKELKEFMLKKHNKQVLKDKKIAILAT
DGVEELEILVPLNYLREVGANVTIVAPRKKIYPETLGLKIPENRRTHIMTVRLMENSGWLKIDKYIDEVSFDDFDGLVLP
GGAWNPDFLRTDVEAQNLVREIVNSNKPLATICHGPLVLINSGLVKDRKITGYWAIMKDLENAGAKVYDQPVVIDGNLIS
SRFPYDLPRLMNSFTEKLLNN

Sequences:

>Translated_261_residues
MKLKTIILIIGFLSSPSIAFANENKVDVYDLVSTSSNVPTLDTVKLITADGVLNKELKEFMLKKHNKQVLKDKKIAILAT
DGVEELEILVPLNYLREVGANVTIVAPRKKIYPETLGLKIPENRRTHIMTVRLMENSGWLKIDKYIDEVSFDDFDGLVLP
GGAWNPDFLRTDVEAQNLVREIVNSNKPLATICHGPLVLINSGLVKDRKITGYWAIMKDLENAGAKVYDQPVVIDGNLIS
SRFPYDLPRLMNSFTEKLLNN
>Mature_261_residues
MKLKTIILIIGFLSSPSIAFANENKVDVYDLVSTSSNVPTLDTVKLITADGVLNKELKEFMLKKHNKQVLKDKKIAILAT
DGVEELEILVPLNYLREVGANVTIVAPRKKIYPETLGLKIPENRRTHIMTVRLMENSGWLKIDKYIDEVSFDDFDGLVLP
GGAWNPDFLRTDVEAQNLVREIVNSNKPLATICHGPLVLINSGLVKDRKITGYWAIMKDLENAGAKVYDQPVVIDGNLIS
SRFPYDLPRLMNSFTEKLLNN

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=177, Percent_Identity=38.9830508474576, Blast_Score=120, Evalue=8e-29,
Organism=Drosophila melanogaster, GI28571932, Length=184, Percent_Identity=27.7173913043478, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 29306; Mature: 29306

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKTIILIIGFLSSPSIAFANENKVDVYDLVSTSSNVPTLDTVKLITADGVLNKELKEF
CCCEEEEEEEEECCCCCEEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHH
MLKKHNKQVLKDKKIAILATDGVEELEILVPLNYLREVGANVTIVAPRKKIYPETLGLKI
HHHHCCHHHHCCCCEEEEEECCCCCEEEEECHHHHHHHCCCEEEECCCHHCCHHHCCEEC
PENRRTHIMTVRLMENSGWLKIDKYIDEVSFDDFDGLVLPGGAWNPDFLRTDVEAQNLVR
CCCCCEEEEEEEEECCCCCEEEHHHHHHCCCCCCCCEEECCCCCCHHHHHCCHHHHHHHH
EIVNSNKPLATICHGPLVLINSGLVKDRKITGYWAIMKDLENAGAKVYDQPVVIDGNLIS
HHHCCCCCEEEEECCCEEEEECCCCCCCEEHHHHHHHHHHHHCCCEEECCCEEEECCEEC
SRFPYDLPRLMNSFTEKLLNN
CCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLKTIILIIGFLSSPSIAFANENKVDVYDLVSTSSNVPTLDTVKLITADGVLNKELKEF
CCCEEEEEEEEECCCCCEEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHH
MLKKHNKQVLKDKKIAILATDGVEELEILVPLNYLREVGANVTIVAPRKKIYPETLGLKI
HHHHCCHHHHCCCCEEEEEECCCCCEEEEECHHHHHHHCCCEEEECCCHHCCHHHCCEEC
PENRRTHIMTVRLMENSGWLKIDKYIDEVSFDDFDGLVLPGGAWNPDFLRTDVEAQNLVR
CCCCCEEEEEEEEECCCCCEEEHHHHHHCCCCCCCCEEECCCCCCHHHHHCCHHHHHHHH
EIVNSNKPLATICHGPLVLINSGLVKDRKITGYWAIMKDLENAGAKVYDQPVVIDGNLIS
HHHCCCCCEEEEECCCEEEEECCCCCCCEEHHHHHHHHHHHHCCCEEECCCEEEECCEEC
SRFPYDLPRLMNSFTEKLLNN
CCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]