Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

Click here to switch to the map view.

The map label for this gene is 37523942

Identifier: 37523942

GI number: 37523942

Start: 4605566

End: 4606297

Strand: Reverse

Name: 37523942

Synonym: gll4373

Alternate gene names: NA

Gene position: 4606297-4605566 (Counterclockwise)

Preceding gene: 37523943

Following gene: 37523939

Centisome position: 98.87

GC content: 60.52

Gene sequence:

>732_bases
ATGTCGCCGATCCGGCCTCCCGGATGCAGTAACGAGAGTCGAGCCCATTGGAGACCTGTGGCGGTTCTCCAATGGGTCCG
TTCGGTTCGACCGATTCCGACTTGTCCACCCCTTCCAGGAAACCACCCGAGTGCCTTGGGGGAACGGTGGTATCTTGAGA
GAATGCAACAGGCGGGAAGGAGGTACCCCCTGGGGGACATCGAACTGGCCTTCCGCAAGGCATGGTTGTTTCTGTACGCG
CGCGGTGTCGGCCCTGACTACATCGCTGCTCTGGAAGCTTTTGCGCGTGCGACGATCGCCGCCTACCGCCAGGGGCTAAG
CCTCGACCGGTTAAAACTTGAACTGATTGCCAACCGCAAGCTGACCGGCAACGCCGCCCTCGATGCCAATCTTGCCTTCG
ACCCCGAGGAATTGGGGGTGCGCGATCTGTGGCTGAGGCTTATCTATTTGACGCTCGAACTGGCAGGAGAGGCGCTCCCG
GGCGAACCGCTCGCCAGCCTAGAGCCGAGCGCCGATGAGACCGGCGTCGAGATGCTGGTCGAAGGGGTGATCCGCGCCCA
CCGCGACGGCTACACCCTCGACTCGTTCAAGTTCGAACTGGCCTTTGAGGGGCGCCAGATCGAAGATCCGGAGCAGGCGG
CCCTGTTCAGCCAGTGGCTTCGGATTATTTTTATGTGTTTGCAACTGCGCGAAGAAGAAGACACTCCCGAAGCGGACGAT
CAAAACGCATAA

Upstream 100 bases:

>100_bases
ATCGAGCCCGATGAGACGGTGCGTCTGTACTACAACCTGTCCTCCAATGGTGGGCAGGCCGACGAGCGCGGCCCGTGGAA
CACTGAACCCACCTTCGAAT

Downstream 100 bases:

>100_bases
GTGTTGCCGCCGACGCGCAGTTGCAGCGGCACCGCCCGGCCGTCGCTACTAAACTGCGGCATGGGAAGATGCCGTCAGGC
CGTCGGTCCAAAGCCCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSPIRPPGCSNESRAHWRPVAVLQWVRSVRPIPTCPPLPGNHPSALGERWYLERMQQAGRRYPLGDIELAFRKAWLFLYA
RGVGPDYIAALEAFARATIAAYRQGLSLDRLKLELIANRKLTGNAALDANLAFDPEELGVRDLWLRLIYLTLELAGEALP
GEPLASLEPSADETGVEMLVEGVIRAHRDGYTLDSFKFELAFEGRQIEDPEQAALFSQWLRIIFMCLQLREEEDTPEADD
QNA

Sequences:

>Translated_243_residues
MSPIRPPGCSNESRAHWRPVAVLQWVRSVRPIPTCPPLPGNHPSALGERWYLERMQQAGRRYPLGDIELAFRKAWLFLYA
RGVGPDYIAALEAFARATIAAYRQGLSLDRLKLELIANRKLTGNAALDANLAFDPEELGVRDLWLRLIYLTLELAGEALP
GEPLASLEPSADETGVEMLVEGVIRAHRDGYTLDSFKFELAFEGRQIEDPEQAALFSQWLRIIFMCLQLREEEDTPEADD
QNA
>Mature_242_residues
SPIRPPGCSNESRAHWRPVAVLQWVRSVRPIPTCPPLPGNHPSALGERWYLERMQQAGRRYPLGDIELAFRKAWLFLYAR
GVGPDYIAALEAFARATIAAYRQGLSLDRLKLELIANRKLTGNAALDANLAFDPEELGVRDLWLRLIYLTLELAGEALPG
EPLASLEPSADETGVEMLVEGVIRAHRDGYTLDSFKFELAFEGRQIEDPEQAALFSQWLRIIFMCLQLREEEDTPEADDQ
NA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27386; Mature: 27254

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPIRPPGCSNESRAHWRPVAVLQWVRSVRPIPTCPPLPGNHPSALGERWYLERMQQAGR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
RYPLGDIELAFRKAWLFLYARGVGPDYIAALEAFARATIAAYRQGLSLDRLKLELIANRK
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
LTGNAALDANLAFDPEELGVRDLWLRLIYLTLELAGEALPGEPLASLEPSADETGVEMLV
CCCCCEECCCCCCCHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
EGVIRAHRDGYTLDSFKFELAFEGRQIEDPEQAALFSQWLRIIFMCLQLREEEDTPEADD
HHHHHHHCCCCEECCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
QNA
CCC
>Mature Secondary Structure 
SPIRPPGCSNESRAHWRPVAVLQWVRSVRPIPTCPPLPGNHPSALGERWYLERMQQAGR
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
RYPLGDIELAFRKAWLFLYARGVGPDYIAALEAFARATIAAYRQGLSLDRLKLELIANRK
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
LTGNAALDANLAFDPEELGVRDLWLRLIYLTLELAGEALPGEPLASLEPSADETGVEMLV
CCCCCEECCCCCCCHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
EGVIRAHRDGYTLDSFKFELAFEGRQIEDPEQAALFSQWLRIIFMCLQLREEEDTPEADD
HHHHHHHCCCCEECCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
QNA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA