Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

Click here to switch to the map view.

The map label for this gene is 37523939

Identifier: 37523939

GI number: 37523939

Start: 4603154

End: 4603759

Strand: Reverse

Name: 37523939

Synonym: gll4370

Alternate gene names: NA

Gene position: 4603759-4603154 (Counterclockwise)

Preceding gene: 37523942

Following gene: 37523937

Centisome position: 98.81

GC content: 61.88

Gene sequence:

>606_bases
GTGGGCTACTACCGGTTGCAGCCTCGGGCCTTCAGCCCGGTGTATCTGACGGATCTGGCAGGTCAGATCCTCGCTTCGCC
CTATCTGGCTATCAACAACCTCAACCGGGACTTTGTGGCCACCCGCGGCTTCTCGGTCGTCTTCACCCGGGCGGGACTGG
CGACCGTCCGGCGCCGGTTTCCATTTTTTGGCAGCTATCTGGATCTGGCGCTGGTGGAGGAGTGCAACGCTTTTTATCTC
AATCCGCTGCTGCTCGAAGAAAATTCACGCGTCGATCCCCATATCGACCGCAGCCTGCGCTCGTACTGCAAGACCATCGA
GCCGCCCTTTGCGGTGAGCGTGCTCTACGTGCAGGTGCCCACGGATCTAGAAGGCGGCGAACTGGTGCTCAGCCGTGCCC
GCAGGCCGGTGGGCCGCATCCGGCCTGAAATCAATTTGCTGGTTCACTTTCAAGGGGATCTCACCCACGCGGTCGAGCGG
ATGCGGGTTTGCGGGCGGCGGTTGAGCCTGGTATGCGAGCAGTATCAGCTGGACGAGGAACAACTCGCCCAGATACCGGA
ATTTGTGATCGAATCGCGCGCGGCCGTCCGCCGGGGGGGCTACTAG

Upstream 100 bases:

>100_bases
CGCCAGGTAACGGTCGAAGAGAGCTTCGCGGGTCATGGGCGTGACAGATGGCGACGTTTCCCTTGTACCATCGATGCGGA
CAAGCGCGAATGGGAGCGGC

Downstream 100 bases:

>100_bases
CCCACCGGGGCCACCACTCGGCCGAGGTGCGGGTAGAGCGCGAAGCGCGTGCACAGCGATGCGACCCGCTCCAGGCAGTC
GGCTACGACCCTGGCGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MGYYRLQPRAFSPVYLTDLAGQILASPYLAINNLNRDFVATRGFSVVFTRAGLATVRRRFPFFGSYLDLALVEECNAFYL
NPLLLEENSRVDPHIDRSLRSYCKTIEPPFAVSVLYVQVPTDLEGGELVLSRARRPVGRIRPEINLLVHFQGDLTHAVER
MRVCGRRLSLVCEQYQLDEEQLAQIPEFVIESRAAVRRGGY

Sequences:

>Translated_201_residues
MGYYRLQPRAFSPVYLTDLAGQILASPYLAINNLNRDFVATRGFSVVFTRAGLATVRRRFPFFGSYLDLALVEECNAFYL
NPLLLEENSRVDPHIDRSLRSYCKTIEPPFAVSVLYVQVPTDLEGGELVLSRARRPVGRIRPEINLLVHFQGDLTHAVER
MRVCGRRLSLVCEQYQLDEEQLAQIPEFVIESRAAVRRGGY
>Mature_200_residues
GYYRLQPRAFSPVYLTDLAGQILASPYLAINNLNRDFVATRGFSVVFTRAGLATVRRRFPFFGSYLDLALVEECNAFYLN
PLLLEENSRVDPHIDRSLRSYCKTIEPPFAVSVLYVQVPTDLEGGELVLSRARRPVGRIRPEINLLVHFQGDLTHAVERM
RVCGRRLSLVCEQYQLDEEQLAQIPEFVIESRAAVRRGGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22941; Mature: 22810

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYYRLQPRAFSPVYLTDLAGQILASPYLAINNLNRDFVATRGFSVVFTRAGLATVRRRF
CCCEECCCCCCCCCHHHHHHHHHHHCCHHEECCCCCHHHHHCCCEEEEEHHHHHHHHHHC
PFFGSYLDLALVEECNAFYLNPLLLEENSRVDPHIDRSLRSYCKTIEPPFAVSVLYVQVP
CCHHHHHHHHHHHHCCCEECCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEC
TDLEGGELVLSRARRPVGRIRPEINLLVHFQGDLTHAVERMRVCGRRLSLVCEQYQLDEE
CCCCCHHHHHHHHCCCHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
QLAQIPEFVIESRAAVRRGGY
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GYYRLQPRAFSPVYLTDLAGQILASPYLAINNLNRDFVATRGFSVVFTRAGLATVRRRF
CCEECCCCCCCCCHHHHHHHHHHHCCHHEECCCCCHHHHHCCCEEEEEHHHHHHHHHHC
PFFGSYLDLALVEECNAFYLNPLLLEENSRVDPHIDRSLRSYCKTIEPPFAVSVLYVQVP
CCHHHHHHHHHHHHCCCEECCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEC
TDLEGGELVLSRARRPVGRIRPEINLLVHFQGDLTHAVERMRVCGRRLSLVCEQYQLDEE
CCCCCHHHHHHHHCCCHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
QLAQIPEFVIESRAAVRRGGY
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA