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The map label for this gene is ycjS [C]

Identifier: 37523918

GI number: 37523918

Start: 4580580

End: 4581731

Strand: Direct

Name: ycjS [C]

Synonym: glr4349

Alternate gene names: 37523918

Gene position: 4580580-4581731 (Clockwise)

Preceding gene: 37523917

Following gene: 37523924

Centisome position: 98.32

GC content: 64.41

Gene sequence:

>1152_bases
GTGATACACTCTGCGCCAGGACGCGGTTTCACCATGGCACGCATCGGCATCGGCATCATCGGCACGGGATTCGGACAAAA
AATTCATCTGCCGGGCTTTCAAGCGCTTGCAGAAGCAATGGATCTGCAGGTGCTGGCCGTCCTGGGCCGTGACGGCGACC
GCATCGCCCAGGTGGCCCGTCAGTTCGATGTGCCCTACCCCTGCACGAGCATCGAGCAACTATTGGAAATACCGGGCCTA
GGAGCAGTGAGTATCGCCTCGCCGCCCTTTTTGCACTACGAGCAGGCGATGGCGACGATCGCCGCGGGCAAGCACCTGCT
GTGCGAAAAACCGGTGGCTCTGGCGGGTTTTGAAGCCTACCGGCTTTTGGAAGCCGCCACCGCCCGCTCCCTGATCCATG
CGGTCGATTTTGAGTTTCGCTGCATTCCCGAGTGGCAACTGCTCCACGAGTTGCTGATGGAAGGCGCGGTCGGAGCGCTG
CACCTGGTCACCGTCGACTGGCTGGTGGAGGGACGAGCTGACCCCCGGCGGCCCTGGAGCTGGTATGCCGAGCGCGAACG
GGGCGGCGGCGCGCTCGGATCGCTGGGCTCCCATCTCTTCGACTATCTGGGGTGGCTATTTGGTCCCCTTACCCGCCTCA
ATGCCCGCCTCGACACGCTCATCCACAGCCGCCCCGACCCGGTGAGCGGCGATTGGCTGCCGGTTGACAGTGACGACAGT
TGCCAACTGTGGCTCGAACTCACCGACGGCACCCCGGTGAACGCGCGACTGTGCACCGCTACCTGGCAGGGTACCGGCCA
TCGTCTCGCAGTCTACGGCGAGCGGGGCAGCCTGGTGCTCGCCAACGACAACCAGAAAGATTACGTCCACGGTTTCAAGC
TCCAGCGCGCCAATGCAGGGGGCGTTCTGGAGCCCGTCGAGGTGCCCGAGCGACTGCGCTTCGAGCGTACCTACCCGGAC
GGGCGGCTCGCGCCGTTTATCGCCATTGCCCGCCGCTTTCTAGAAGGCATCCGCGAGGGCGAGACGGTAGTGCCGTCGCT
GCGCGAGGGCGCCTACGCGCAACTGTTGATGGATCTGGCCCAACGCTCCCACCGGGAGCAAGTCTGGCTGGAGGTGCCGG
TCGAAGCGTTTCCGGGCGAAACGTCAGCTTAA

Upstream 100 bases:

>100_bases
ATCCAGGGCCAGACGCTGGAGTTGGTGATTATCGTCTTGATCCTCTTCGAGGTGGTGATGGCTTTCGTGCGCGGCGGCTA
AAGCCCGTCTGCACGCACAA

Downstream 100 bases:

>100_bases
TCCCGTGGCCAACCGTTGCTGGAGGCGGCGGGCCAGCGCTTTAGCGAAGGTCACCGGCGAGAACTGATAATACGAACACA
CCGCCAGCAGCACGCAGCCC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MIHSAPGRGFTMARIGIGIIGTGFGQKIHLPGFQALAEAMDLQVLAVLGRDGDRIAQVARQFDVPYPCTSIEQLLEIPGL
GAVSIASPPFLHYEQAMATIAAGKHLLCEKPVALAGFEAYRLLEAATARSLIHAVDFEFRCIPEWQLLHELLMEGAVGAL
HLVTVDWLVEGRADPRRPWSWYAERERGGGALGSLGSHLFDYLGWLFGPLTRLNARLDTLIHSRPDPVSGDWLPVDSDDS
CQLWLELTDGTPVNARLCTATWQGTGHRLAVYGERGSLVLANDNQKDYVHGFKLQRANAGGVLEPVEVPERLRFERTYPD
GRLAPFIAIARRFLEGIREGETVVPSLREGAYAQLLMDLAQRSHREQVWLEVPVEAFPGETSA

Sequences:

>Translated_383_residues
MIHSAPGRGFTMARIGIGIIGTGFGQKIHLPGFQALAEAMDLQVLAVLGRDGDRIAQVARQFDVPYPCTSIEQLLEIPGL
GAVSIASPPFLHYEQAMATIAAGKHLLCEKPVALAGFEAYRLLEAATARSLIHAVDFEFRCIPEWQLLHELLMEGAVGAL
HLVTVDWLVEGRADPRRPWSWYAERERGGGALGSLGSHLFDYLGWLFGPLTRLNARLDTLIHSRPDPVSGDWLPVDSDDS
CQLWLELTDGTPVNARLCTATWQGTGHRLAVYGERGSLVLANDNQKDYVHGFKLQRANAGGVLEPVEVPERLRFERTYPD
GRLAPFIAIARRFLEGIREGETVVPSLREGAYAQLLMDLAQRSHREQVWLEVPVEAFPGETSA
>Mature_383_residues
MIHSAPGRGFTMARIGIGIIGTGFGQKIHLPGFQALAEAMDLQVLAVLGRDGDRIAQVARQFDVPYPCTSIEQLLEIPGL
GAVSIASPPFLHYEQAMATIAAGKHLLCEKPVALAGFEAYRLLEAATARSLIHAVDFEFRCIPEWQLLHELLMEGAVGAL
HLVTVDWLVEGRADPRRPWSWYAERERGGGALGSLGSHLFDYLGWLFGPLTRLNARLDTLIHSRPDPVSGDWLPVDSDDS
CQLWLELTDGTPVNARLCTATWQGTGHRLAVYGERGSLVLANDNQKDYVHGFKLQRANAGGVLEPVEVPERLRFERTYPD
GRLAPFIAIARRFLEGIREGETVVPSLREGAYAQLLMDLAQRSHREQVWLEVPVEAFPGETSA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI9506675, Length=379, Percent_Identity=22.1635883905013, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI226371727, Length=372, Percent_Identity=23.6559139784946, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI7657212, Length=191, Percent_Identity=27.2251308900524, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI1787574, Length=202, Percent_Identity=25.7425742574257, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI19920536, Length=271, Percent_Identity=26.1992619926199, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24581117, Length=242, Percent_Identity=25.6198347107438, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42214; Mature: 42214

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHSAPGRGFTMARIGIGIIGTGFGQKIHLPGFQALAEAMDLQVLAVLGRDGDRIAQVAR
CCCCCCCCCEEEEEECEEEEECCCCCEEECCCHHHHHHHHHHHEEEEECCCCHHHHHHHH
QFDVPYPCTSIEQLLEIPGLGAVSIASPPFLHYEQAMATIAAGKHLLCEKPVALAGFEAY
HCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHH
RLLEAATARSLIHAVDFEFRCIPEWQLLHELLMEGAVGALHLVTVDWLVEGRADPRRPWS
HHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCEEEEEEEEHHEECCCCCCCCCH
WYAERERGGGALGSLGSHLFDYLGWLFGPLTRLNARLDTLIHSRPDPVSGDWLPVDSDDS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCC
CQLWLELTDGTPVNARLCTATWQGTGHRLAVYGERGSLVLANDNQKDYVHGFKLQRANAG
CEEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEECCCCCHHHCCEEEEECCCC
GVLEPVEVPERLRFERTYPDGRLAPFIAIARRFLEGIREGETVVPSLREGAYAQLLMDLA
CCCCHHCCHHHHCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHH
QRSHREQVWLEVPVEAFPGETSA
HHHCCCEEEEEECHHHCCCCCCC
>Mature Secondary Structure
MIHSAPGRGFTMARIGIGIIGTGFGQKIHLPGFQALAEAMDLQVLAVLGRDGDRIAQVAR
CCCCCCCCCEEEEEECEEEEECCCCCEEECCCHHHHHHHHHHHEEEEECCCCHHHHHHHH
QFDVPYPCTSIEQLLEIPGLGAVSIASPPFLHYEQAMATIAAGKHLLCEKPVALAGFEAY
HCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHH
RLLEAATARSLIHAVDFEFRCIPEWQLLHELLMEGAVGALHLVTVDWLVEGRADPRRPWS
HHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCEEEEEEEEHHEECCCCCCCCCH
WYAERERGGGALGSLGSHLFDYLGWLFGPLTRLNARLDTLIHSRPDPVSGDWLPVDSDDS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCC
CQLWLELTDGTPVNARLCTATWQGTGHRLAVYGERGSLVLANDNQKDYVHGFKLQRANAG
CEEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEECCCCCHHHCCEEEEECCCC
GVLEPVEVPERLRFERTYPDGRLAPFIAIARRFLEGIREGETVVPSLREGAYAQLLMDLA
CCCCHHCCHHHHCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHH
QRSHREQVWLEVPVEAFPGETSA
HHHCCCEEEEEECHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]