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The map label for this gene is 37523621

Identifier: 37523621

GI number: 37523621

Start: 4246584

End: 4247093

Strand: Direct

Name: 37523621

Synonym: glr4052

Alternate gene names: NA

Gene position: 4246584-4247093 (Clockwise)

Preceding gene: 37523620

Following gene: 37523623

Centisome position: 91.15

GC content: 55.69

Gene sequence:

>510_bases
GTGAGTAACGACGGTCACAAATCCCCACATGGGCAGATTTCGCGCCCACTCCCTAGAGGTAAATTAGTAGCGTTGAATAC
AAATGACAAGGAGCAGCGCATGGCAAGCATTGTTGATACGGCCGTTCAAGCAGGCACCTTCAAGACCCTGGCGCAGGCAT
TGACCGCCGCCGATCTGGTGGACACGCTGAAGGGCAGTGGTCCTTTCACCGTCTTTGCTCCCACCGACGATGCCTTTCAA
AGCCTTCCTGCCGGTACTCTGAACGATCTGCTCAAGCCGGAGAACAAGTCCAAGTTGGCGAATATTCTCAAATACCACGT
CGTCTCCGGCAAAGTGATGTCTAGCGACATCAAGCCTGGCAACGTCGCGACTGTGGCGGGTGAGTCGATTTCGATCCAGA
CCCAGGGACAGCAGGTGATGGTCAACGAGGCCCGCGTCACCAAGGCCGACATTGCCGCCGACAACGGCGTCATCCATGTG
ATCGACAAAGTTTTGCTGCCCAAGGGCTAA

Upstream 100 bases:

>100_bases
CGGGTATTACAGACGGTCGCCAGGCGGTTATTGGGCCCGGATTGATATTAAGAATGCAGCGCTATCTTGATCACAGCTTC
TGCTATTCAGATCAGCATAA

Downstream 100 bases:

>100_bases
CGGTCGTATTCGCCCCTAGGCGTTCACATTTTTAGCACCCGCCGGAGCACTCCGGCGGGTGCTTATCAATAGCGGGCCCG
GCTCGGCTGCAATACCAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSNDGHKSPHGQISRPLPRGKLVALNTNDKEQRMASIVDTAVQAGTFKTLAQALTAADLVDTLKGSGPFTVFAPTDDAFQ
SLPAGTLNDLLKPENKSKLANILKYHVVSGKVMSSDIKPGNVATVAGESISIQTQGQQVMVNEARVTKADIAADNGVIHV
IDKVLLPKG

Sequences:

>Translated_169_residues
MSNDGHKSPHGQISRPLPRGKLVALNTNDKEQRMASIVDTAVQAGTFKTLAQALTAADLVDTLKGSGPFTVFAPTDDAFQ
SLPAGTLNDLLKPENKSKLANILKYHVVSGKVMSSDIKPGNVATVAGESISIQTQGQQVMVNEARVTKADIAADNGVIHV
IDKVLLPKG
>Mature_168_residues
SNDGHKSPHGQISRPLPRGKLVALNTNDKEQRMASIVDTAVQAGTFKTLAQALTAADLVDTLKGSGPFTVFAPTDDAFQS
LPAGTLNDLLKPENKSKLANILKYHVVSGKVMSSDIKPGNVATVAGESISIQTQGQQVMVNEARVTKADIAADNGVIHVI
DKVLLPKG

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

Organism=Homo sapiens, GI4507467, Length=152, Percent_Identity=35.5263157894737, Blast_Score=82, Evalue=2e-16,
Organism=Homo sapiens, GI209862911, Length=134, Percent_Identity=35.8208955223881, Blast_Score=78, Evalue=3e-15,
Organism=Homo sapiens, GI209863011, Length=134, Percent_Identity=35.8208955223881, Blast_Score=78, Evalue=3e-15,
Organism=Homo sapiens, GI209863034, Length=134, Percent_Identity=35.8208955223881, Blast_Score=78, Evalue=4e-15,
Organism=Homo sapiens, GI209862907, Length=134, Percent_Identity=35.8208955223881, Blast_Score=78, Evalue=4e-15,
Organism=Homo sapiens, GI61743978, Length=144, Percent_Identity=31.25, Blast_Score=67, Evalue=8e-12,
Organism=Homo sapiens, GI61743980, Length=124, Percent_Identity=28.2258064516129, Blast_Score=67, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 17796; Mature: 17664

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDGHKSPHGQISRPLPRGKLVALNTNDKEQRMASIVDTAVQAGTFKTLAQALTAADLV
CCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DTLKGSGPFTVFAPTDDAFQSLPAGTLNDLLKPENKSKLANILKYHVVSGKVMSSDIKPG
HHHCCCCCEEEECCCCHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCCC
NVATVAGESISIQTQGQQVMVNEARVTKADIAADNGVIHVIDKVLLPKG
CEEEECCCEEEEEECCCEEEEECCHHHHHHHCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SNDGHKSPHGQISRPLPRGKLVALNTNDKEQRMASIVDTAVQAGTFKTLAQALTAADLV
CCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DTLKGSGPFTVFAPTDDAFQSLPAGTLNDLLKPENKSKLANILKYHVVSGKVMSSDIKPG
HHHCCCCCEEEECCCCHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCCC
NVATVAGESISIQTQGQQVMVNEARVTKADIAADNGVIHVIDKVLLPKG
CEEEECCCEEEEEECCCEEEEECCHHHHHHHCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]