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The map label for this gene is wcaJ [H]

Identifier: 37523360

GI number: 37523360

Start: 3999495

End: 4000928

Strand: Reverse

Name: wcaJ [H]

Synonym: gll3791

Alternate gene names: 37523360

Gene position: 4000928-3999495 (Counterclockwise)

Preceding gene: 37523367

Following gene: 37523342

Centisome position: 85.87

GC content: 61.23

Gene sequence:

>1434_bases
ATGCGCCAACAAACCGTACCCCGCTTCGGACGGCCCTGGCTGGAGGGTCTGGCGAACGGACTGACTGTACTCATTGTCGT
CTCGACCCTTTGTTGGGATGCACTATCGGTGTTGTTTGCCTACTGGATGGCCTACGAAGTACGCGCCTCCAGTCCCAATA
CGCTGTACGGACCGGAATTTTATTGGGCGCTCGCGCAATTTAGCGTGATTTCCACACTGCTGGTCTTTGCCGCTTCAGGC
CTGTACCGGGCACCGGGCTATCAGTCGCGCTTCGACGAAGTGGCCAAGGCACTCATCGGTCTTGTGCTCGCCTTTGCGAT
CGTGGTGGCGGGGGTGTTTTTCTTCCGCGAGGCTTCTTTTTCGCGCTTCGTGCTGCTTTATGCCTGGGCAGTGGCGGCGG
TGTCGATCGTGGCGGGGCGGTTGGCGCTGCAGCAGATCAACCGCAGCCTCCGGGGGCGCGGCTTCGGATTGCAGCCGGTC
CTCATCGTCGGCACCGGAGCACCGGCCGAATCGCTCAAGGCGTTGCTGGCGATGAATCCCCAGTGGGGTCTACATCTGGT
CGGTCTGGTGGCCGAGGAGCCTGAGGCGGCGGCCGCAAGCGGTGAGGTGATTGCCTCGGTCGCGACGTTGGGACGTTACC
TTACAACCCACGAGGTGGCCGAAGTCTGGGTGGCGCTGCCCGACTACCCACGCAGGCAGCTGCTTGAACTGTTGCAGGTA
ATTACTGCCGTGCGGCCGGTGCAGATCCGGCTGGTGCCTGGCATTCTCGAGTATGTGACCGCCCGTATGCAGGTGGATGT
GCTAGGGGGAACGGCGCTGCTCACGCTGCAGGATACGCCGCTCAGACGTGCCTCCAATCGTTTTACCAAGCGATTTCTGG
ACATTGTGCTCTCCGGGTTCGGCCTGGTACTCGGGGCTCCTCTGCTGGTGCTGATCGCTGCGGCGGTCAAGTTCAGCAGC
CCGGGACCGGTGTTCTACAAGCAGGAACGCATCGGCCGCGACGGGGCCGTGTTCTGGATTTATAAGTTCCGCACGATGCG
GGAGGGTGCCGAGGGGCAAGGACCAGGTTGGACGACCCGCGACGATCCGCGCCGCACAGTGGTGGGAGCGTTTTTGCGGC
GCACCAGCCTCGACGAATTGCCGCAACTTTGGAACGTACTAGTGGGCGAGATGAGCCTGGTTGGTCCCAGACCCGAGCGG
CCTATCTATGTCGAACGCTTCAGCCAGGACATTCCCAAGTACCCCGACCGGCATCTGGCCAAGACGGGGATTACCGGCTG
GGCGCAGATCCACGGCCTGCGCGGCGATACTTCGATTCCCGATCGGGTGCGCTACGACCTTTATTACATTGAAAACTGGT
CGCTGCTGCTTGATTTGCGCATTATTTTGGTTACGGCCTTGCAAGTAGTGTTCCACCCCGAGGACGCCTATTAA

Upstream 100 bases:

>100_bases
TCTCAGGTCGTAGATCAGTGTACCGTGCGCGGCCGTGGGCGGCCGAGTTTACCAAGCGGGCGGGAATGTCGTAGCATCGG
TAGGTCTTTGAATACGCAGG

Downstream 100 bases:

>100_bases
ACTGGACACGCCAAGTCGGCAACAATCTCTTCAGCGCAGGCCACACCCCCAAAGAGAATTAAAAGAAGGATTATCGGCAA
GTTGCATCGGGCTGCTCACT

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MRQQTVPRFGRPWLEGLANGLTVLIVVSTLCWDALSVLFAYWMAYEVRASSPNTLYGPEFYWALAQFSVISTLLVFAASG
LYRAPGYQSRFDEVAKALIGLVLAFAIVVAGVFFFREASFSRFVLLYAWAVAAVSIVAGRLALQQINRSLRGRGFGLQPV
LIVGTGAPAESLKALLAMNPQWGLHLVGLVAEEPEAAAASGEVIASVATLGRYLTTHEVAEVWVALPDYPRRQLLELLQV
ITAVRPVQIRLVPGILEYVTARMQVDVLGGTALLTLQDTPLRRASNRFTKRFLDIVLSGFGLVLGAPLLVLIAAAVKFSS
PGPVFYKQERIGRDGAVFWIYKFRTMREGAEGQGPGWTTRDDPRRTVVGAFLRRTSLDELPQLWNVLVGEMSLVGPRPER
PIYVERFSQDIPKYPDRHLAKTGITGWAQIHGLRGDTSIPDRVRYDLYYIENWSLLLDLRIILVTALQVVFHPEDAY

Sequences:

>Translated_477_residues
MRQQTVPRFGRPWLEGLANGLTVLIVVSTLCWDALSVLFAYWMAYEVRASSPNTLYGPEFYWALAQFSVISTLLVFAASG
LYRAPGYQSRFDEVAKALIGLVLAFAIVVAGVFFFREASFSRFVLLYAWAVAAVSIVAGRLALQQINRSLRGRGFGLQPV
LIVGTGAPAESLKALLAMNPQWGLHLVGLVAEEPEAAAASGEVIASVATLGRYLTTHEVAEVWVALPDYPRRQLLELLQV
ITAVRPVQIRLVPGILEYVTARMQVDVLGGTALLTLQDTPLRRASNRFTKRFLDIVLSGFGLVLGAPLLVLIAAAVKFSS
PGPVFYKQERIGRDGAVFWIYKFRTMREGAEGQGPGWTTRDDPRRTVVGAFLRRTSLDELPQLWNVLVGEMSLVGPRPER
PIYVERFSQDIPKYPDRHLAKTGITGWAQIHGLRGDTSIPDRVRYDLYYIENWSLLLDLRIILVTALQVVFHPEDAY
>Mature_477_residues
MRQQTVPRFGRPWLEGLANGLTVLIVVSTLCWDALSVLFAYWMAYEVRASSPNTLYGPEFYWALAQFSVISTLLVFAASG
LYRAPGYQSRFDEVAKALIGLVLAFAIVVAGVFFFREASFSRFVLLYAWAVAAVSIVAGRLALQQINRSLRGRGFGLQPV
LIVGTGAPAESLKALLAMNPQWGLHLVGLVAEEPEAAAASGEVIASVATLGRYLTTHEVAEVWVALPDYPRRQLLELLQV
ITAVRPVQIRLVPGILEYVTARMQVDVLGGTALLTLQDTPLRRASNRFTKRFLDIVLSGFGLVLGAPLLVLIAAAVKFSS
PGPVFYKQERIGRDGAVFWIYKFRTMREGAEGQGPGWTTRDDPRRTVVGAFLRRTSLDELPQLWNVLVGEMSLVGPRPER
PIYVERFSQDIPKYPDRHLAKTGITGWAQIHGLRGDTSIPDRVRYDLYYIENWSLLLDLRIILVTALQVVFHPEDAY

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=367, Percent_Identity=34.8773841961853, Blast_Score=206, Evalue=3e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017473 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 52990; Mature: 52990

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQQTVPRFGRPWLEGLANGLTVLIVVSTLCWDALSVLFAYWMAYEVRASSPNTLYGPEF
CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHH
YWALAQFSVISTLLVFAASGLYRAPGYQSRFDEVAKALIGLVLAFAIVVAGVFFFREASF
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SRFVLLYAWAVAAVSIVAGRLALQQINRSLRGRGFGLQPVLIVGTGAPAESLKALLAMNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCC
QWGLHLVGLVAEEPEAAAASGEVIASVATLGRYLTTHEVAEVWVALPDYPRRQLLELLQV
CCCCEEEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ITAVRPVQIRLVPGILEYVTARMQVDVLGGTALLTLQDTPLRRASNRFTKRFLDIVLSGF
HHHCCCEEEEECHHHHHHHHHHHEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
GLVLGAPLLVLIAAAVKFSSPGPVFYKQERIGRDGAVFWIYKFRTMREGAEGQGPGWTTR
HHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCCCCEEEEEEHHHHHCCCCCCCCCCCCC
DDPRRTVVGAFLRRTSLDELPQLWNVLVGEMSLVGPRPERPIYVERFSQDIPKYPDRHLA
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHH
KTGITGWAQIHGLRGDTSIPDRVRYDLYYIENWSLLLDLRIILVTALQVVFHPEDAY
HHCCCCHHHEECCCCCCCCCCHHEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRQQTVPRFGRPWLEGLANGLTVLIVVSTLCWDALSVLFAYWMAYEVRASSPNTLYGPEF
CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHH
YWALAQFSVISTLLVFAASGLYRAPGYQSRFDEVAKALIGLVLAFAIVVAGVFFFREASF
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SRFVLLYAWAVAAVSIVAGRLALQQINRSLRGRGFGLQPVLIVGTGAPAESLKALLAMNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCC
QWGLHLVGLVAEEPEAAAASGEVIASVATLGRYLTTHEVAEVWVALPDYPRRQLLELLQV
CCCCEEEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ITAVRPVQIRLVPGILEYVTARMQVDVLGGTALLTLQDTPLRRASNRFTKRFLDIVLSGF
HHHCCCEEEEECHHHHHHHHHHHEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
GLVLGAPLLVLIAAAVKFSSPGPVFYKQERIGRDGAVFWIYKFRTMREGAEGQGPGWTTR
HHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCCCCEEEEEEHHHHHCCCCCCCCCCCCC
DDPRRTVVGAFLRRTSLDELPQLWNVLVGEMSLVGPRPERPIYVERFSQDIPKYPDRHLA
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHH
KTGITGWAQIHGLRGDTSIPDRVRYDLYYIENWSLLLDLRIILVTALQVVFHPEDAY
HHCCCCHHHEECCCCCCCCCCHHEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8759852; 9097040; 9278503 [H]