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The map label for this gene is yebA [H]

Identifier: 37523300

GI number: 37523300

Start: 3941144

End: 3942016

Strand: Reverse

Name: yebA [H]

Synonym: gll3731

Alternate gene names: 37523300

Gene position: 3942016-3941144 (Counterclockwise)

Preceding gene: 37523301

Following gene: 37523296

Centisome position: 84.61

GC content: 68.61

Gene sequence:

>873_bases
ATGGAGCCCCGTCATCCCGAGCACTGGTCGATCCGCATAGCCCGTCCAGGGCGCGAACCGGTGATCACCGACGTGAGGCC
GGCGGCGGCAGTATGCGCGGCGGTGCTGGCGCTGGTGGGGCTTGTTGCGGGAGTGCGTCTGGCGCTTAACCATTTCGAGC
GCACCGTGAGCGGCTTTGAGCGCACGGTGACCAGTGAGCGCGAGCGCAACGCGGCACTCGAGGTGCAGGCGGGCCGCCTA
TTGGGTAAGCTCGAGCAACTCGAAGCGGAGGTGCGCTCTTTGCAGCGCCAGGCGAACCTCGCCCCCACCATCGACGCTAC
CGGACAGGGCGGAGCGGGCGGCGCCGAACCGGGGGCCGGAGCGGGAATGATGCTTTCGATCGCCAATTTGCGCCTCGACA
AACTCTCAAAGGCGATGCGCGCCAAAAAGACGATCGCCCTGGCCCTGGCGGAGCGCTCCGCCCGCCCGGCGGGATTACCC
GTGGTGGGTGCCCGCCTTACCTCGGGCTTCGGGCCGCGCCGCGATCCGGTGATGGGTGGCGTCGAATTGCACAGTGGCCT
CGATTTTGCCGGCCCCTACGGTCTGCCCATTCGCGCCACCGCCCCCGGCCGGGTGAGCCGGGCGGGCTGGGGTAACGGCT
GGGGTCAGCATATCGTCATCGATCACGGCTACGGCTTTGAAACGCTTTACGCCCACCTTTCGCGCCTCGAAGTGCGTGCA
GGCGACAGCGTGGGGCGCGGCGAAGTGGTGGGCCGCATGGGCAGCACCGGCCGCTCCACCGGCACCCACTTGCACTACAC
GGTCTACCTCGACGCTCAGGCGGTCGATCCGAGCCCGTACCTGGGCGAAGCGCCGCCTGTTCCGGCGCTATGA

Upstream 100 bases:

>100_bases
AAGCCGACGCGCCAGCCCGGCGACTGCGCTCTTGACCCGGTACCGCCGCCTGTGGCATGCTCCCCTGAGCAGTTTGGCAA
GCAAAGTTCAGGAGGAAAAT

Downstream 100 bases:

>100_bases
CATGCCGATCACGTACTTGCGCCACTCTTCGTTAATGCCGCCGCGCAGGTGTTTGGTGATCTCGAAGTGCAACGAACTAT
GGGGCCGGCGCGGCATGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MEPRHPEHWSIRIARPGREPVITDVRPAAAVCAAVLALVGLVAGVRLALNHFERTVSGFERTVTSERERNAALEVQAGRL
LGKLEQLEAEVRSLQRQANLAPTIDATGQGGAGGAEPGAGAGMMLSIANLRLDKLSKAMRAKKTIALALAERSARPAGLP
VVGARLTSGFGPRRDPVMGGVELHSGLDFAGPYGLPIRATAPGRVSRAGWGNGWGQHIVIDHGYGFETLYAHLSRLEVRA
GDSVGRGEVVGRMGSTGRSTGTHLHYTVYLDAQAVDPSPYLGEAPPVPAL

Sequences:

>Translated_290_residues
MEPRHPEHWSIRIARPGREPVITDVRPAAAVCAAVLALVGLVAGVRLALNHFERTVSGFERTVTSERERNAALEVQAGRL
LGKLEQLEAEVRSLQRQANLAPTIDATGQGGAGGAEPGAGAGMMLSIANLRLDKLSKAMRAKKTIALALAERSARPAGLP
VVGARLTSGFGPRRDPVMGGVELHSGLDFAGPYGLPIRATAPGRVSRAGWGNGWGQHIVIDHGYGFETLYAHLSRLEVRA
GDSVGRGEVVGRMGSTGRSTGTHLHYTVYLDAQAVDPSPYLGEAPPVPAL
>Mature_290_residues
MEPRHPEHWSIRIARPGREPVITDVRPAAAVCAAVLALVGLVAGVRLALNHFERTVSGFERTVTSERERNAALEVQAGRL
LGKLEQLEAEVRSLQRQANLAPTIDATGQGGAGGAEPGAGAGMMLSIANLRLDKLSKAMRAKKTIALALAERSARPAGLP
VVGARLTSGFGPRRDPVMGGVELHSGLDFAGPYGLPIRATAPGRVSRAGWGNGWGQHIVIDHGYGFETLYAHLSRLEVRA
GDSVGRGEVVGRMGSTGRSTGTHLHYTVYLDAQAVDPSPYLGEAPPVPAL

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=114, Percent_Identity=43.859649122807, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1789099, Length=99, Percent_Identity=39.3939393939394, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87082297, Length=159, Percent_Identity=31.4465408805031, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 30557; Mature: 30557

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPRHPEHWSIRIARPGREPVITDVRPAAAVCAAVLALVGLVAGVRLALNHFERTVSGFE
CCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTVTSERERNAALEVQAGRLLGKLEQLEAEVRSLQRQANLAPTIDATGQGGAGGAEPGAG
HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
AGMMLSIANLRLDKLSKAMRAKKTIALALAERSARPAGLPVVGARLTSGFGPRRDPVMGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHCCCCCCCCCCCCC
VELHSGLDFAGPYGLPIRATAPGRVSRAGWGNGWGQHIVIDHGYGFETLYAHLSRLEVRA
EECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCC
GDSVGRGEVVGRMGSTGRSTGTHLHYTVYLDAQAVDPSPYLGEAPPVPAL
CCCCCCCHHHHCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEPRHPEHWSIRIARPGREPVITDVRPAAAVCAAVLALVGLVAGVRLALNHFERTVSGFE
CCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTVTSERERNAALEVQAGRLLGKLEQLEAEVRSLQRQANLAPTIDATGQGGAGGAEPGAG
HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
AGMMLSIANLRLDKLSKAMRAKKTIALALAERSARPAGLPVVGARLTSGFGPRRDPVMGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHCCCCCCCCCCCCC
VELHSGLDFAGPYGLPIRATAPGRVSRAGWGNGWGQHIVIDHGYGFETLYAHLSRLEVRA
EECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCC
GDSVGRGEVVGRMGSTGRSTGTHLHYTVYLDAQAVDPSPYLGEAPPVPAL
CCCCCCCHHHHCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]