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The map label for this gene is 37523289

Identifier: 37523289

GI number: 37523289

Start: 3932539

End: 3932973

Strand: Reverse

Name: 37523289

Synonym: gll3720

Alternate gene names: NA

Gene position: 3932973-3932539 (Counterclockwise)

Preceding gene: 37523290

Following gene: 37523288

Centisome position: 84.42

GC content: 62.99

Gene sequence:

>435_bases
ATGAACGATGTGCAACCCGGCGATTGGCGCACCCGCTATCTGCTTGAATGCATTCCGCAAATCAGTTGGATGGCGCGTGC
GGACGGCTGCTTCGAGTGCGGCAACGGCCGCTGCTTGGAGTTTACCGGTCTGAACCTGGAACAACTGCGGGGCTCGGGCT
GGCGCTCGGTGGTGCACCCGGAGGATCTGGGCCGATGGATGGTGCATTGGCAAGCCGCGGTGCGGGTCGGCGAACCTTAC
CGGTTGGACTACCGCCTGAGGCGCCGCGACGGTGTTTACCGCTGGCATCTGCTGCTGGCTCGACCGGTCTACGACGGCGA
CGGCCTGGTGATCCGCTGGTTCGGCACCTGCACCGATATTCACCGCTACAAACTTCTCGAATTGTCGGTGCACGAGCGCG
AAATTGGGCCTGGGCTTTCTGACGACCCTGCCTGA

Upstream 100 bases:

>100_bases
ATATATCGACAACTGGTGCCTCAGCCAGGATCTGGCGATTCTCTGGCAAACCGTTGTCGTGGTGTTGGCTAAAAAAGGCG
CCTACTAGGAAAAACCTGCC

Downstream 100 bases:

>100_bases
CAGCGAGCCGACCTGATTTGTCCGTGTCCACATTATTTATGCCCATCGCAAGGAGCATCCATGAAAGTAGGGGTTATCGG
CACCGGTTACGTCGGCCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MNDVQPGDWRTRYLLECIPQISWMARADGCFECGNGRCLEFTGLNLEQLRGSGWRSVVHPEDLGRWMVHWQAAVRVGEPY
RLDYRLRRRDGVYRWHLLLARPVYDGDGLVIRWFGTCTDIHRYKLLELSVHEREIGPGLSDDPA

Sequences:

>Translated_144_residues
MNDVQPGDWRTRYLLECIPQISWMARADGCFECGNGRCLEFTGLNLEQLRGSGWRSVVHPEDLGRWMVHWQAAVRVGEPY
RLDYRLRRRDGVYRWHLLLARPVYDGDGLVIRWFGTCTDIHRYKLLELSVHEREIGPGLSDDPA
>Mature_144_residues
MNDVQPGDWRTRYLLECIPQISWMARADGCFECGNGRCLEFTGLNLEQLRGSGWRSVVHPEDLGRWMVHWQAAVRVGEPY
RLDYRLRRRDGVYRWHLLLARPVYDGDGLVIRWFGTCTDIHRYKLLELSVHEREIGPGLSDDPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 16842; Mature: 16842

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDVQPGDWRTRYLLECIPQISWMARADGCFECGNGRCLEFTGLNLEQLRGSGWRSVVHP
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEECCCHHHHCCCCCCCCCCH
EDLGRWMVHWQAAVRVGEPYRLDYRLRRRDGVYRWHLLLARPVYDGDGLVIRWFGTCTDI
HHHHHHHHHEEEHHCCCCCEEECEEEECCCCEEEEEEEEEEEEECCCCEEEEEECCCCCC
HRYKLLELSVHEREIGPGLSDDPA
CCEEEEEEEEEHHHCCCCCCCCCC
>Mature Secondary Structure
MNDVQPGDWRTRYLLECIPQISWMARADGCFECGNGRCLEFTGLNLEQLRGSGWRSVVHP
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEECCCHHHHCCCCCCCCCCH
EDLGRWMVHWQAAVRVGEPYRLDYRLRRRDGVYRWHLLLARPVYDGDGLVIRWFGTCTDI
HHHHHHHHHEEEHHCCCCCEEECEEEECCCCEEEEEEEEEEEEECCCCEEEEEECCCCCC
HRYKLLELSVHEREIGPGLSDDPA
CCEEEEEEEEEHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]