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The map label for this gene is psbI

Identifier: 37523203

GI number: 37523203

Start: 3831880

End: 3831996

Strand: Reverse

Name: psbI

Synonym: gvip494

Alternate gene names: 37523203

Gene position: 3831996-3831880 (Counterclockwise)

Preceding gene: 37523204

Following gene: 37523201

Centisome position: 82.25

GC content: 62.39

Gene sequence:

>117_bases
ATGGAAGTTCTCAAGTGGGTTGTCACGATCGTCGTGCTGTTGTTTGTGGCCATCTTCGCCTTCGGCTTCCTGTCCGGGGA
TCCGAGCCGCAACCCCGGGCGGGGCAGCGGGCAGTAG

Upstream 100 bases:

>100_bases
ATTGCGGATGCCGCTGACCGACCTGGCCACCGGCATCCGCGAGTATCTCCAAAATTAAGGCAGTGCTTTATCATTGTTTA
AGAAATATTCGGGTCCCCAG

Downstream 100 bases:

>100_bases
ATAGATGCCGGGTGCCGGCGTTTGTGGGCCGACACCCGAATCTCTAAACTCAATGGGCGCCCGAGCCGATGGCGGCCCCG
ACCGGGGCGGGCTGGAGCAG

Product: photosystem II protein

Products: NA

Alternate protein names: PSII-I; PSII 4.4 kDa protein

Number of amino acids: Translated: 38; Mature: 38

Protein sequence:

>38_residues
MEVLKWVVTIVVLLFVAIFAFGFLSGDPSRNPGRGSGQ

Sequences:

>Translated_38_residues
MEVLKWVVTIVVLLFVAIFAFGFLSGDPSRNPGRGSGQ
>Mature_38_residues
MEVLKWVVTIVVLLFVAIFAFGFLSGDPSRNPGRGSGQ

Specific function: This protein is a component of the reaction center of photosystem II

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbI family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBI_GLOVI (Q7NF92)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_926580.1
- ProteinModelPortal:   Q7NF92
- SMR:   Q7NF92
- GeneID:   2602038
- GenomeReviews:   BA000045_GR
- NMPDR:   fig|251221.1.peg.3634
- HOGENOM:   HBG636405
- BioCyc:   GVIO251221:GSL3634-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_01316
- InterPro:   IPR003686

Pfam domain/function: PF02532 PsbI

EC number: NA

Molecular weight: Translated: 4109; Mature: 4109

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x16cc139c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVLKWVVTIVVLLFVAIFAFGFLSGDPSRNPGRGSGQ
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
>Mature Secondary Structure
MEVLKWVVTIVVLLFVAIFAFGFLSGDPSRNPGRGSGQ
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292