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The map label for this gene is rimP [H]

Identifier: 37523057

GI number: 37523057

Start: 3698955

End: 3699503

Strand: Direct

Name: rimP [H]

Synonym: glr3488

Alternate gene names: 37523057

Gene position: 3698955-3699503 (Clockwise)

Preceding gene: 37523054

Following gene: 37523058

Centisome position: 79.39

GC content: 62.48

Gene sequence:

>549_bases
GTGTGTGGCACACTATACTTAGTATCCTCAGCACACAGGGACTGGAGGAGTGGGTTCGAGGCCCACTTTTTTGATGGCAT
GAATCCCCGCGACATTGTCGAGCAGGTGACGGCCCTAGCCGAACCGGTCGCCGAACAACTGGGTTTGCAATTGGTGGCGG
TCGCGTACCAGACCCACACCAAACCGGCCACCCTGCGCGTGGATATCCGCCATCCCACCGAAGGCACCGGGCTTGACGAC
TGCGAGAAGATGAGCCGCGCCCTCGAAGCGCTGCTTGACACCCGCGACGATCTCATCATCGGCGCTTACAATCTCGAAGT
CTCCAGTCCCGGCGTCGAGCGGGTACTGACCACCGACCGCGAATTTATGGCCTTTCGGGGTTTCCCGGTGATGGTCAAGA
CCTTCGGTCCGGTGGACGGCAAAAAACAGTGGGAGGGCCGTTTGCTCGAGCGCGACGGTGAAAACGTCTACCTCACCATC
GCCGGCCGGCGCGTCGCGCTGCCCCGCCCCCAGGTGGCGCGGGTGCAGCTGGTGCAGTCGCTCCCTTAG

Upstream 100 bases:

>100_bases
CGTTGTGGCCCGGGGTGTGAAAGCCCGTGCCCGAGGCTAGAGCGACGGCCCTCAGCGCATCCCAGAGCGGAGTGGTTTCC
ACGGCTTCCTTGGTCTTGTT

Downstream 100 bases:

>100_bases
ACCGACAACTACATAGCTTCAGGAGAGTCCAACGTGTCGATGATTCATTTGCCCGGCGTCAATCAACAGATTGAGACGAT
CAGCCGGCAGCGGAATTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MCGTLYLVSSAHRDWRSGFEAHFFDGMNPRDIVEQVTALAEPVAEQLGLQLVAVAYQTHTKPATLRVDIRHPTEGTGLDD
CEKMSRALEALLDTRDDLIIGAYNLEVSSPGVERVLTTDREFMAFRGFPVMVKTFGPVDGKKQWEGRLLERDGENVYLTI
AGRRVALPRPQVARVQLVQSLP

Sequences:

>Translated_182_residues
MCGTLYLVSSAHRDWRSGFEAHFFDGMNPRDIVEQVTALAEPVAEQLGLQLVAVAYQTHTKPATLRVDIRHPTEGTGLDD
CEKMSRALEALLDTRDDLIIGAYNLEVSSPGVERVLTTDREFMAFRGFPVMVKTFGPVDGKKQWEGRLLERDGENVYLTI
AGRRVALPRPQVARVQLVQSLP
>Mature_182_residues
MCGTLYLVSSAHRDWRSGFEAHFFDGMNPRDIVEQVTALAEPVAEQLGLQLVAVAYQTHTKPATLRVDIRHPTEGTGLDD
CEKMSRALEALLDTRDDLIIGAYNLEVSSPGVERVLTTDREFMAFRGFPVMVKTFGPVDGKKQWEGRLLERDGENVYLTI
AGRRVALPRPQVARVQLVQSLP

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=145, Percent_Identity=31.0344827586207, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 20324; Mature: 20324

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGTLYLVSSAHRDWRSGFEAHFFDGMNPRDIVEQVTALAEPVAEQLGLQLVAVAYQTHT
CCCEEEEEHHCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEHHCCC
KPATLRVDIRHPTEGTGLDDCEKMSRALEALLDTRDDLIIGAYNLEVSSPGVERVLTTDR
CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHCCH
EFMAFRGFPVMVKTFGPVDGKKQWEGRLLERDGENVYLTIAGRRVALPRPQVARVQLVQS
HHHHHCCCEEEEEECCCCCCCCCCCCCCEECCCCEEEEEECCCEEECCCCHHHHHHHHHH
LP
CC
>Mature Secondary Structure
MCGTLYLVSSAHRDWRSGFEAHFFDGMNPRDIVEQVTALAEPVAEQLGLQLVAVAYQTHT
CCCEEEEEHHCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEHHCCC
KPATLRVDIRHPTEGTGLDDCEKMSRALEALLDTRDDLIIGAYNLEVSSPGVERVLTTDR
CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHCCH
EFMAFRGFPVMVKTFGPVDGKKQWEGRLLERDGENVYLTIAGRRVALPRPQVARVQLVQS
HHHHHCCCEEEEEECCCCCCCCCCCCCCEECCCCEEEEEECCCEEECCCCHHHHHHHHHH
LP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]