| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37522877
Identifier: 37522877
GI number: 37522877
Start: 3506873
End: 3508441
Strand: Reverse
Name: 37522877
Synonym: gll3308
Alternate gene names: NA
Gene position: 3508441-3506873 (Counterclockwise)
Preceding gene: 37522878
Following gene: 37522876
Centisome position: 75.3
GC content: 63.93
Gene sequence:
>1569_bases ATGAGCGCGGTAGAACAAAAAATCAACGAACTGGAGCAACTTACCCAGACCGCGGAGTTTCAAGCCCTCCCGCCCGAGGA GCGCCGCCGGATTCTTGATGACTATTACCGGCGGGAACTGGCCCCGGCCTCGGTGGACCGCGCCAGCTTCGACAAAATAT TCGCCGCCGCCTGGCAGGCCCCGCCGCCTGTCAAAGCGGCCTCTGAACGCAAGCAGCTTAACCTCACCCCGGTGTGGTTG ACCCTGGGATTGGTGGGTGTGACGGCCGTCGCCCTCACTGGCCTGGTGTTCTGGACCAATAACCTGCAGGATATCAGTAC CCAGGACGACGCGACGCTCATCAAGAGCCTGCGCGGCGGCGATCCGGTGCGCGAGGACGAAGTGGCCCTGCGCCGCTCGC TGCCGGACACCGGCCCGGAAGTCTGGGAGATCGAAAAGGCCCTGGAGCAGATCGCCGAACCACTCAAAGACGGCGGCTGG CTGGAAGCGAAGGAGCGCACCGCCCGGGTGGTGGATTTGCTCAACCGCTACGAACCGCAGATCCTCGCCCGTGTTCCCGC CAATGCGCGCAATCGGGCCGTGCAGGCGATTGCCCAGGTGCGCGCCAACATCCGCGCCCTCGAAGACAAGATTCAGGCAA AGGACATCACCGGTTCGACCCTCCAGGCGCGGCGGACTTTCTGGTATCTCGACTTATTGGAACTGGCGCTCCTCGAGGAG TTCCGGCCCGAGGTGCCCGCCGAGTACCGCAATTTGCCCAGACTGGAGGGGGGCTGGGCGATGGTGCGCTTCACCACCGA CCGCGGCCCCTTCGTGGCCCTGGTGGACGGCTTCAACGCCCCGGTGACCGCCGGCAACTTTCTAGATCTGGTGCAACGGG GCTTCTACAACGGCCTGAAGATCACCCGCGCCGAGCGGTTCAACCTGGTGCAGACGGGTGACCCCAGCGGCAAGGGCACC GGCGGCTTCACCGACCCGGCTACCGGCAAATTGCGCACGATTCCGATGGAGGTGCGCCCGGCGCGCAAAGAAGCCGAGAT CACCGCTTCGCAGGTCATCCAGCGGCGCGTCGACTACGTCCAGGATCGCTTCGAACTCGACCCCATCAAGCTGCGCGAGG AGATGAGCAACCTGCATAAGCGCTATATTGCCGACGACTGGAAGCCGGTGCCCTACGGCAAGACCATCGAGAGCTACCCG GCGCTGTACTACGGCCCGCCGGGAGTGTTCTCAATGGCGCGCTACGAAAAAGATCCGAATTCCGCCTCCAGCCAGTTTTT CATCTCCTTCTCCGACCCCGAACTCAACCCGACCGGCAAGAACCTCTCCGACGGCAAGTACGCCAACTTCGGCTACATCA CCCAGGGCATCCGTACCCTCCGCCAGCTCAAAGTCGGCGACACCATCCAAAAAGCCGAGATCTTGAACTGCAAAGCAGCG GCTTTCAACGAATACCGCGAACTGCCCCCGGCGGGCTCTTCGATGTACGCCACCCGCGAAGGCCCCGCCACCAACCTGGA GACGAGTTGCCTGCCCCTGCCCGCGCCGCGCCTGGTGAGCGGTCCCTAG
Upstream 100 bases:
>100_bases CCGAAGGCCCGGCGGCGGCGACCAAACCGGCGATGCGCATCGTGCGCGACAGCGACGGCCGATTGAGTTTGCAGCCCGAC CAACCGAGCGGGGTAGAGCG
Downstream 100 bases:
>100_bases GGCCTGGGTATACTGGGTCTGTCCGGCCCCGAGGCGAGGTGTACGGCGATGACCTTTATGCAGCCCGCTTACCCATTGCC GCCGAAGCAGACGCTCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Putative thylakoid lumen PPIase; Putative thylakoid lumen rotamase [H]
Number of amino acids: Translated: 522; Mature: 521
Protein sequence:
>522_residues MSAVEQKINELEQLTQTAEFQALPPEERRRILDDYYRRELAPASVDRASFDKIFAAAWQAPPPVKAASERKQLNLTPVWL TLGLVGVTAVALTGLVFWTNNLQDISTQDDATLIKSLRGGDPVREDEVALRRSLPDTGPEVWEIEKALEQIAEPLKDGGW LEAKERTARVVDLLNRYEPQILARVPANARNRAVQAIAQVRANIRALEDKIQAKDITGSTLQARRTFWYLDLLELALLEE FRPEVPAEYRNLPRLEGGWAMVRFTTDRGPFVALVDGFNAPVTAGNFLDLVQRGFYNGLKITRAERFNLVQTGDPSGKGT GGFTDPATGKLRTIPMEVRPARKEAEITASQVIQRRVDYVQDRFELDPIKLREEMSNLHKRYIADDWKPVPYGKTIESYP ALYYGPPGVFSMARYEKDPNSASSQFFISFSDPELNPTGKNLSDGKYANFGYITQGIRTLRQLKVGDTIQKAEILNCKAA AFNEYRELPPAGSSMYATREGPATNLETSCLPLPAPRLVSGP
Sequences:
>Translated_522_residues MSAVEQKINELEQLTQTAEFQALPPEERRRILDDYYRRELAPASVDRASFDKIFAAAWQAPPPVKAASERKQLNLTPVWL TLGLVGVTAVALTGLVFWTNNLQDISTQDDATLIKSLRGGDPVREDEVALRRSLPDTGPEVWEIEKALEQIAEPLKDGGW LEAKERTARVVDLLNRYEPQILARVPANARNRAVQAIAQVRANIRALEDKIQAKDITGSTLQARRTFWYLDLLELALLEE FRPEVPAEYRNLPRLEGGWAMVRFTTDRGPFVALVDGFNAPVTAGNFLDLVQRGFYNGLKITRAERFNLVQTGDPSGKGT GGFTDPATGKLRTIPMEVRPARKEAEITASQVIQRRVDYVQDRFELDPIKLREEMSNLHKRYIADDWKPVPYGKTIESYP ALYYGPPGVFSMARYEKDPNSASSQFFISFSDPELNPTGKNLSDGKYANFGYITQGIRTLRQLKVGDTIQKAEILNCKAA AFNEYRELPPAGSSMYATREGPATNLETSCLPLPAPRLVSGP >Mature_521_residues SAVEQKINELEQLTQTAEFQALPPEERRRILDDYYRRELAPASVDRASFDKIFAAAWQAPPPVKAASERKQLNLTPVWLT LGLVGVTAVALTGLVFWTNNLQDISTQDDATLIKSLRGGDPVREDEVALRRSLPDTGPEVWEIEKALEQIAEPLKDGGWL EAKERTARVVDLLNRYEPQILARVPANARNRAVQAIAQVRANIRALEDKIQAKDITGSTLQARRTFWYLDLLELALLEEF RPEVPAEYRNLPRLEGGWAMVRFTTDRGPFVALVDGFNAPVTAGNFLDLVQRGFYNGLKITRAERFNLVQTGDPSGKGTG GFTDPATGKLRTIPMEVRPARKEAEITASQVIQRRVDYVQDRFELDPIKLREEMSNLHKRYIADDWKPVPYGKTIESYPA LYYGPPGVFSMARYEKDPNSASSQFFISFSDPELNPTGKNLSDGKYANFGYITQGIRTLRQLKVGDTIQKAEILNCKAAA FNEYRELPPAGSSMYATREGPATNLETSCLPLPAPRLVSGP
Specific function: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Required for the assembly and stabilization of PSII [H]
COG id: COG0652
COG function: function code O; Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
Gene ontology:
Cell location: Cellular thylakoid lumen (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase cyclophilin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015891 - InterPro: IPR002130 - InterPro: IPR023222 [H]
Pfam domain/function: PF00160 Pro_isomerase [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 58430; Mature: 58299
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS50072 CSA_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVEQKINELEQLTQTAEFQALPPEERRRILDDYYRRELAPASVDRASFDKIFAAAWQA CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC PPPVKAASERKQLNLTPVWLTLGLVGVTAVALTGLVFWTNNLQDISTQDDATLIKSLRGG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC DPVREDEVALRRSLPDTGPEVWEIEKALEQIAEPLKDGGWLEAKERTARVVDLLNRYEPQ CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC ILARVPANARNRAVQAIAQVRANIRALEDKIQAKDITGSTLQARRTFWYLDLLELALLEE EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH FRPEVPAEYRNLPRLEGGWAMVRFTTDRGPFVALVDGFNAPVTAGNFLDLVQRGFYNGLK HCCCCCHHHHCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCEE ITRAERFNLVQTGDPSGKGTGGFTDPATGKLRTIPMEVRPARKEAEITASQVIQRRVDYV EEEHHHCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHH QDRFELDPIKLREEMSNLHKRYIADDWKPVPYGKTIESYPALYYGPPGVFSMARYEKDPN HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEECCCCHHHHHHHCCCCC SASSQFFISFSDPELNPTGKNLSDGKYANFGYITQGIRTLRQLKVGDTIQKAEILNCKAA CCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AFNEYRELPPAGSSMYATREGPATNLETSCLPLPAPRLVSGP HHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SAVEQKINELEQLTQTAEFQALPPEERRRILDDYYRRELAPASVDRASFDKIFAAAWQA CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC PPPVKAASERKQLNLTPVWLTLGLVGVTAVALTGLVFWTNNLQDISTQDDATLIKSLRGG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC DPVREDEVALRRSLPDTGPEVWEIEKALEQIAEPLKDGGWLEAKERTARVVDLLNRYEPQ CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC ILARVPANARNRAVQAIAQVRANIRALEDKIQAKDITGSTLQARRTFWYLDLLELALLEE EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH FRPEVPAEYRNLPRLEGGWAMVRFTTDRGPFVALVDGFNAPVTAGNFLDLVQRGFYNGLK HCCCCCHHHHCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCEE ITRAERFNLVQTGDPSGKGTGGFTDPATGKLRTIPMEVRPARKEAEITASQVIQRRVDYV EEEHHHCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHH QDRFELDPIKLREEMSNLHKRYIADDWKPVPYGKTIESYPALYYGPPGVFSMARYEKDPN HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEECCCCHHHHHHHCCCCC SASSQFFISFSDPELNPTGKNLSDGKYANFGYITQGIRTLRQLKVGDTIQKAEILNCKAA CCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AFNEYRELPPAGSSMYATREGPATNLETSCLPLPAPRLVSGP HHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]