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The map label for this gene is recJ [H]

Identifier: 37522845

GI number: 37522845

Start: 3478982

End: 3480970

Strand: Direct

Name: recJ [H]

Synonym: glr3276

Alternate gene names: 37522845

Gene position: 3478982-3480970 (Clockwise)

Preceding gene: 37522843

Following gene: 37522846

Centisome position: 74.67

GC content: 69.53

Gene sequence:

>1989_bases
ATGGCCTCCCGCTGGAACCCGCAGCCCACTCCGTCCCACCTCCACCCGGAGGTGCGCGCCCTGGTCGGTGAATACGGCGC
AAGGGCGCTGGGATCTCTGGGAATTGGCGATCCCCAGTCGGCAAGGGCGTTTCTGTGGCCCGAGCGATCCCCGCTCGGGC
ATTGTCCTACCTGGCCGGAACTTGAGAGGGCGGCGCAGTGGATTGCACAGACAATTTCTGAAGGAAAATCGATCACTCTC
CAGACTGCCGATCGCTTCGAGAGTGCGGTAGCGGCGCTCCTGCTGCAGGAGGCGCTGCGGGAGGCGGGGACGGAACTTAC
GGTAGTTGCTGGTGCGCAGCCTGTGGCGCAGAGCTTGCTGATCGCCGTGGGCTCGATGCCCGCCGCACCGCCCGGTTGTC
GGACGATCGCCATCGAAGCGCGCTTGGGCGAGGCGTCCGGTGAGGGTCTGGTAGCCCTCAATGCGCTGCAACTGGCGCTC
GATCACCCGCTGCGGTTTCTGCCGGAGGCGGCGGTAGCCTGGATGCTGGTGGAGGCGTTGCTTGGCCAACTGAATAGACA
ACCGCCTCCCGATCGATGGGCGGATCTGTTGCTGGCCGGGTGTGTGGCGGGGTTGGTCTCCCTTGCCCATTGCCGGCCAC
AGGTGCTGGCGGGTTTGGCCCAAGACGGCGGCGGATCGCATCCGTTGCTGGCGGCACTGATAAGCTCCCACCGCCGGCAG
ATCTTCAAGATGGCGGCACCGCTCGACGCCCTGGGTGCCCGGGCGACGGCCTGGCTTGCGGGCGAATCCGATGGGGGCTG
GGAGCCGCTATGGCGAGAGCACGAGGCCCGCATCGCCCGGGTGGTGCAGGAGGGGGCGCTTGCCATCGAGAGCCTGGGCC
TGCAATCGCAGGGGGTCGCGGTGCTCGCCCGGGTCCACTGGCCCCGGCAGGCTCTGTCCCTGGCGGCAGCCAGGCTCGCG
GGGCGCTACGGCCTGGCGGTGGTGTTGATCGCTTGCCCGGAGGCAGAAGCGCTTGCCCACGGCTCGGGTTACGCGCCGGA
AGGTACCGACTTGATCGCTGCTCTAGCGGCGCTCAGGCCGCTATGGGTAGAGGCGGGCGGGCGGCCGGAGGCGGTGCGCC
TGGTGTGCGAAAGCCGGTGGGTCGCCGCGCTGCAAAGGGAACTCGGCCGCGAGATCGCCCGGCGGGTTGCCCGCGAGAGA
CTGGAGCCTCCAGTGGCCATCGCGATTGACGCGGAGACCACTCTCGATTTGCCCGCCGAACTCGACCGGGCCTTTCATGA
ACTGGAGCGGCTCGCTCCTTTTGGACCCGGACGGCCTCGCCCGCGGGTGGCGGTGCGCAACTATCGGCCGCAATGGACAC
TCTCCCGCGACGGGCGGCATCTGGAGTGCAAAATTGGCCCGCGCACGCTGCGGCTGCGCGACGGGGCCGAGGAGCGCGCC
CGCCGGCAGGAGGCGGGTCTGATGGAACTCATCTTCGAGATGGAGCCGTGGGAGGCGAATCTCTGGTGGGGACGGCTGCA
CGCGGTGCAGCCCGCGGAGGCTCGCCCGGCGCTCCCCGCCGAAGCCGGGCGGCAGATCCAGGTGGAAGATTTTCGGCGGA
TGGGCGCGACACTGCCCGATGCGCTCCCGGCGCTCATCTTGCGGGAGTGGCCGCTCTGCGCCGAGGAACTCTCGGTGCTG
CTCAGGCAAAGCCCCTGGTCGACGGTGGTGCTCGCCGGCCGGAGCCGCGATTGGTCGCGGGTGCACGCGCGGCTGCCGGT
GCTGGTCCAGCGCTGGGAGCAAGGGGAGCGCTTGCCGGAGGCGCTTGCCGATTCGGAATTGCCCGAGCCGGTCGTTGTGC
GCATTGTGGCGCGCTGCCGAGCGGGCGGTGCTGTGGCCCGGGCGGCTTGTGCCGTACTGCGCGAAGCCAGTGCCTTCCAG
CGCTGGCTGGATGCGGCCCCGGCGGCGGAAATTGCCCGGCTGTGCAACCGGCTGGTTCAGGATGGCTGA

Upstream 100 bases:

>100_bases
TGAGCCCACGTTACCATGCAGTATTAACGCCGGTAAGACCGCGCAACACTCCTTAACGCTCCGACAACCACTCCAGGAAA
CAGGATACTTTTGGTTCGGT

Downstream 100 bases:

>100_bases
GGCGGTGGTCGGCTGGCCGCGCGGCGGTCTGAGCGGGGCGTGCCTGGAGCGCTACCGCGAACTGATGGCCACTGGGGTGG
CGCCCGAGCGCATCGTGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 662; Mature: 661

Protein sequence:

>662_residues
MASRWNPQPTPSHLHPEVRALVGEYGARALGSLGIGDPQSARAFLWPERSPLGHCPTWPELERAAQWIAQTISEGKSITL
QTADRFESAVAALLLQEALREAGTELTVVAGAQPVAQSLLIAVGSMPAAPPGCRTIAIEARLGEASGEGLVALNALQLAL
DHPLRFLPEAAVAWMLVEALLGQLNRQPPPDRWADLLLAGCVAGLVSLAHCRPQVLAGLAQDGGGSHPLLAALISSHRRQ
IFKMAAPLDALGARATAWLAGESDGGWEPLWREHEARIARVVQEGALAIESLGLQSQGVAVLARVHWPRQALSLAAARLA
GRYGLAVVLIACPEAEALAHGSGYAPEGTDLIAALAALRPLWVEAGGRPEAVRLVCESRWVAALQRELGREIARRVARER
LEPPVAIAIDAETTLDLPAELDRAFHELERLAPFGPGRPRPRVAVRNYRPQWTLSRDGRHLECKIGPRTLRLRDGAEERA
RRQEAGLMELIFEMEPWEANLWWGRLHAVQPAEARPALPAEAGRQIQVEDFRRMGATLPDALPALILREWPLCAEELSVL
LRQSPWSTVVLAGRSRDWSRVHARLPVLVQRWEQGERLPEALADSELPEPVVVRIVARCRAGGAVARAACAVLREASAFQ
RWLDAAPAAEIARLCNRLVQDG

Sequences:

>Translated_662_residues
MASRWNPQPTPSHLHPEVRALVGEYGARALGSLGIGDPQSARAFLWPERSPLGHCPTWPELERAAQWIAQTISEGKSITL
QTADRFESAVAALLLQEALREAGTELTVVAGAQPVAQSLLIAVGSMPAAPPGCRTIAIEARLGEASGEGLVALNALQLAL
DHPLRFLPEAAVAWMLVEALLGQLNRQPPPDRWADLLLAGCVAGLVSLAHCRPQVLAGLAQDGGGSHPLLAALISSHRRQ
IFKMAAPLDALGARATAWLAGESDGGWEPLWREHEARIARVVQEGALAIESLGLQSQGVAVLARVHWPRQALSLAAARLA
GRYGLAVVLIACPEAEALAHGSGYAPEGTDLIAALAALRPLWVEAGGRPEAVRLVCESRWVAALQRELGREIARRVARER
LEPPVAIAIDAETTLDLPAELDRAFHELERLAPFGPGRPRPRVAVRNYRPQWTLSRDGRHLECKIGPRTLRLRDGAEERA
RRQEAGLMELIFEMEPWEANLWWGRLHAVQPAEARPALPAEAGRQIQVEDFRRMGATLPDALPALILREWPLCAEELSVL
LRQSPWSTVVLAGRSRDWSRVHARLPVLVQRWEQGERLPEALADSELPEPVVVRIVARCRAGGAVARAACAVLREASAFQ
RWLDAAPAAEIARLCNRLVQDG
>Mature_661_residues
ASRWNPQPTPSHLHPEVRALVGEYGARALGSLGIGDPQSARAFLWPERSPLGHCPTWPELERAAQWIAQTISEGKSITLQ
TADRFESAVAALLLQEALREAGTELTVVAGAQPVAQSLLIAVGSMPAAPPGCRTIAIEARLGEASGEGLVALNALQLALD
HPLRFLPEAAVAWMLVEALLGQLNRQPPPDRWADLLLAGCVAGLVSLAHCRPQVLAGLAQDGGGSHPLLAALISSHRRQI
FKMAAPLDALGARATAWLAGESDGGWEPLWREHEARIARVVQEGALAIESLGLQSQGVAVLARVHWPRQALSLAAARLAG
RYGLAVVLIACPEAEALAHGSGYAPEGTDLIAALAALRPLWVEAGGRPEAVRLVCESRWVAALQRELGREIARRVARERL
EPPVAIAIDAETTLDLPAELDRAFHELERLAPFGPGRPRPRVAVRNYRPQWTLSRDGRHLECKIGPRTLRLRDGAEERAR
RQEAGLMELIFEMEPWEANLWWGRLHAVQPAEARPALPAEAGRQIQVEDFRRMGATLPDALPALILREWPLCAEELSVLL
RQSPWSTVVLAGRSRDWSRVHARLPVLVQRWEQGERLPEALADSELPEPVVVRIVARCRAGGAVARAACAVLREASAFQR
WLDAAPAAEIARLCNRLVQDG

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: NA

Molecular weight: Translated: 71894; Mature: 71763

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRWNPQPTPSHLHPEVRALVGEYGARALGSLGIGDPQSARAFLWPERSPLGHCPTWPE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHH
LERAAQWIAQTISEGKSITLQTADRFESAVAALLLQEALREAGTELTVVAGAQPVAQSLL
HHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
IAVGSMPAAPPGCRTIAIEARLGEASGEGLVALNALQLALDHPLRFLPEAAVAWMLVEAL
HHHCCCCCCCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LGQLNRQPPPDRWADLLLAGCVAGLVSLAHCRPQVLAGLAQDGGGSHPLLAALISSHRRQ
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
IFKMAAPLDALGARATAWLAGESDGGWEPLWREHEARIARVVQEGALAIESLGLQSQGVA
HHHHHCCHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
VLARVHWPRQALSLAAARLAGRYGLAVVLIACPEAEALAHGSGYAPEGTDLIAALAALRP
EEEEHHCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHH
LWVEAGGRPEAVRLVCESRWVAALQRELGREIARRVARERLEPPVAIAIDAETTLDLPAE
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHH
LDRAFHELERLAPFGPGRPRPRVAVRNYRPQWTLSRDGRHLECKIGPRTLRLRDGAEERA
HHHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEECCCCCEEEEEECCEEEEECCCHHHHH
RRQEAGLMELIFEMEPWEANLWWGRLHAVQPAEARPALPAEAGRQIQVEDFRRMGATLPD
HHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHCCCEEEHHHHHHCCCCCHH
ALPALILREWPLCAEELSVLLRQSPWSTVVLAGRSRDWSRVHARLPVLVQRWEQGERLPE
HHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALADSELPEPVVVRIVARCRAGGAVARAACAVLREASAFQRWLDAAPAAEIARLCNRLVQ
HHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
DG
CC
>Mature Secondary Structure 
ASRWNPQPTPSHLHPEVRALVGEYGARALGSLGIGDPQSARAFLWPERSPLGHCPTWPE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHH
LERAAQWIAQTISEGKSITLQTADRFESAVAALLLQEALREAGTELTVVAGAQPVAQSLL
HHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
IAVGSMPAAPPGCRTIAIEARLGEASGEGLVALNALQLALDHPLRFLPEAAVAWMLVEAL
HHHCCCCCCCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LGQLNRQPPPDRWADLLLAGCVAGLVSLAHCRPQVLAGLAQDGGGSHPLLAALISSHRRQ
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
IFKMAAPLDALGARATAWLAGESDGGWEPLWREHEARIARVVQEGALAIESLGLQSQGVA
HHHHHCCHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
VLARVHWPRQALSLAAARLAGRYGLAVVLIACPEAEALAHGSGYAPEGTDLIAALAALRP
EEEEHHCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHH
LWVEAGGRPEAVRLVCESRWVAALQRELGREIARRVARERLEPPVAIAIDAETTLDLPAE
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHH
LDRAFHELERLAPFGPGRPRPRVAVRNYRPQWTLSRDGRHLECKIGPRTLRLRDGAEERA
HHHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEECCCCCEEEEEECCEEEEECCCHHHHH
RRQEAGLMELIFEMEPWEANLWWGRLHAVQPAEARPALPAEAGRQIQVEDFRRMGATLPD
HHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHCCCEEEHHHHHHCCCCCHH
ALPALILREWPLCAEELSVLLRQSPWSTVVLAGRSRDWSRVHARLPVLVQRWEQGERLPE
HHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALADSELPEPVVVRIVARCRAGGAVARAACAVLREASAFQRWLDAAPAAEIARLCNRLVQ
HHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
DG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]