| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37522660
Identifier: 37522660
GI number: 37522660
Start: 3295372
End: 3296406
Strand: Direct
Name: 37522660
Synonym: glr3091
Alternate gene names: NA
Gene position: 3295372-3296406 (Clockwise)
Preceding gene: 37522659
Following gene: 37522661
Centisome position: 70.73
GC content: 63.57
Gene sequence:
>1035_bases ATGCTGCTGGGGTTCGCCTGGATGGAGTTGTTCGTCGAGTCGGCACAGGCGAGCGCCAATCGCCTCTGCGCCCAGATGGG CTTTACCCCGGTGGGCTGCTTCGAGGATTGTAATACTTTTAGTCTTGCGATACGCAATGGCGGTGCGCTGCTGGTGGTGA GCGAGGCGCTTGGAGCGACCGGTCCGGTGCAGCGGTACCTCGATGGCCACCCCCAGGGGATCGCCGATGTCGCTTTTTGG ACGGAAGCGTTTCCGGGTGGCCCCGGCGCTCTCCCCGGTCGCCTGCCCGCCACCGGACAAATCGTGGGGCCGGCGGGGAT CACCCATACGTTCGCGCCTCCCCAGCCGGGCGATCTGCCGCCGGGTTTTCTTCCCCTGCCGGGCGCCGCGCTGCGCCGCG AGCTGGCTGGGATCGACCACGTCGTGCTCAACCTCGGCACCGAAGCCTTCGAGCCTGCCATCCACTGGTACCGGCAGGTG CTTGGGCTCGAAGCGAGCCGCTACTTTGAAATTTCCACCCCCCACTCGGCCCTCAAAAGCTGGGTACTCACCGACTCTGC CCATCGCGTGCGCCTGCCGCTGAATGCCCCGCTGACTGCCAACTCCCAGGTGAGCGAATTTCTGGAGGCCAACGGTGGCC CGGGAGTGCAGCATATTGCCCTACGCACGACGAATATTGCCCACACGGTCGACCACCTGCGCACCCTGGGGGTGGAATTT CTCGACGCCCCGGCTACCTACTTCGAGCGCCTTGGAGATCGCGTCGATCTGGCCGGTCTGGACATGGAGACCTTGCGCCG ATTGCACATCCTCGTCGACCAGGACGAAAGCGAAGGACGAATCTTGCAAATATTTACCCGACCGCTGTTCGCGGAGCCGA CCTTGTTCTTCGAATTTATCGAGCGCCAGGGAACAGCCCTCGGCTTCGGCGAAGGTAACTTTCAGTCGCTTTTTGAAGCA ATCGAACGGGAGCAGCAGTCGCGCGGCACCCTGGAGGCAGAGCGCAAACCCGCCTTCGTGCAGGACGCGCTATAG
Upstream 100 bases:
>100_bases CGGTAATCAAAGGCGCGCTCGCCATGCAGTTGATGCGGCGCAGCTACGCGCGGGGGCTGGTGCGCTTCGGCGTGTTCGCG GCCCAAAAGGCGGAGGGATA
Downstream 100 bases:
>100_bases AAATCTGGGGTAAGAGTGTCGCTGCCGCTACACAAGCTGAAATCACTGTGCCGACGGTCGACGGCTTGATCACCGCAACA GCCGCCCGCCACGGTCTGGC
Product: 4-hydroxyphenylpyruvate dioxygenase
Products: homogentisate; CO2
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MLLGFAWMELFVESAQASANRLCAQMGFTPVGCFEDCNTFSLAIRNGGALLVVSEALGATGPVQRYLDGHPQGIADVAFW TEAFPGGPGALPGRLPATGQIVGPAGITHTFAPPQPGDLPPGFLPLPGAALRRELAGIDHVVLNLGTEAFEPAIHWYRQV LGLEASRYFEISTPHSALKSWVLTDSAHRVRLPLNAPLTANSQVSEFLEANGGPGVQHIALRTTNIAHTVDHLRTLGVEF LDAPATYFERLGDRVDLAGLDMETLRRLHILVDQDESEGRILQIFTRPLFAEPTLFFEFIERQGTALGFGEGNFQSLFEA IEREQQSRGTLEAERKPAFVQDAL
Sequences:
>Translated_344_residues MLLGFAWMELFVESAQASANRLCAQMGFTPVGCFEDCNTFSLAIRNGGALLVVSEALGATGPVQRYLDGHPQGIADVAFW TEAFPGGPGALPGRLPATGQIVGPAGITHTFAPPQPGDLPPGFLPLPGAALRRELAGIDHVVLNLGTEAFEPAIHWYRQV LGLEASRYFEISTPHSALKSWVLTDSAHRVRLPLNAPLTANSQVSEFLEANGGPGVQHIALRTTNIAHTVDHLRTLGVEF LDAPATYFERLGDRVDLAGLDMETLRRLHILVDQDESEGRILQIFTRPLFAEPTLFFEFIERQGTALGFGEGNFQSLFEA IEREQQSRGTLEAERKPAFVQDAL >Mature_344_residues MLLGFAWMELFVESAQASANRLCAQMGFTPVGCFEDCNTFSLAIRNGGALLVVSEALGATGPVQRYLDGHPQGIADVAFW TEAFPGGPGALPGRLPATGQIVGPAGITHTFAPPQPGDLPPGFLPLPGAALRRELAGIDHVVLNLGTEAFEPAIHWYRQV LGLEASRYFEISTPHSALKSWVLTDSAHRVRLPLNAPLTANSQVSEFLEANGGPGVQHIALRTTNIAHTVDHLRTLGVEF LDAPATYFERLGDRVDLAGLDMETLRRLHILVDQDESEGRILQIFTRPLFAEPTLFFEFIERQGTALGFGEGNFQSLFEA IEREQQSRGTLEAERKPAFVQDAL
Specific function: Unknown
COG id: COG3185
COG function: function code ER; 4-hydroxyphenylpyruvate dioxygenase and related hemolysins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4HPPD family [H]
Homologues:
Organism=Homo sapiens, GI4504477, Length=371, Percent_Identity=33.6927223719677, Blast_Score=171, Evalue=8e-43, Organism=Homo sapiens, GI285002264, Length=347, Percent_Identity=34.2939481268012, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI14249394, Length=372, Percent_Identity=28.494623655914, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17555220, Length=373, Percent_Identity=33.7801608579088, Blast_Score=168, Evalue=4e-42, Organism=Caenorhabditis elegans, GI17550752, Length=359, Percent_Identity=30.9192200557103, Blast_Score=158, Evalue=3e-39, Organism=Drosophila melanogaster, GI24667510, Length=370, Percent_Identity=33.7837837837838, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI21356105, Length=242, Percent_Identity=40.9090909090909, Blast_Score=155, Evalue=6e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005956 - InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: 1.13.11.27
Molecular weight: Translated: 37392; Mature: 37392
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLGFAWMELFVESAQASANRLCAQMGFTPVGCFEDCNTFSLAIRNGGALLVVSEALGAT CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEEECCCEEEEEEHHHCCC GPVQRYLDGHPQGIADVAFWTEAFPGGPGALPGRLPATGQIVGPAGITHTFAPPQPGDLP CCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC PGFLPLPGAALRRELAGIDHVVLNLGTEAFEPAIHWYRQVLGLEASRYFEISTPHSALKS CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHEEEECCCHHHHHH WVLTDSAHRVRLPLNAPLTANSQVSEFLEANGGPGVQHIALRTTNIAHTVDHLRTLGVEF HHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH LDAPATYFERLGDRVDLAGLDMETLRRLHILVDQDESEGRILQIFTRPLFAEPTLFFEFI HCCHHHHHHHCCCCEEECCCCHHHHHHHHHEECCCCCCCCEEEEECCCCCCCHHHHHHHH ERQGTALGFGEGNFQSLFEAIEREQQSRGTLEAERKPAFVQDAL HHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCC >Mature Secondary Structure MLLGFAWMELFVESAQASANRLCAQMGFTPVGCFEDCNTFSLAIRNGGALLVVSEALGAT CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEEECCCEEEEEEHHHCCC GPVQRYLDGHPQGIADVAFWTEAFPGGPGALPGRLPATGQIVGPAGITHTFAPPQPGDLP CCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC PGFLPLPGAALRRELAGIDHVVLNLGTEAFEPAIHWYRQVLGLEASRYFEISTPHSALKS CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHEEEECCCHHHHHH WVLTDSAHRVRLPLNAPLTANSQVSEFLEANGGPGVQHIALRTTNIAHTVDHLRTLGVEF HHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH LDAPATYFERLGDRVDLAGLDMETLRRLHILVDQDESEGRILQIFTRPLFAEPTLFFEFI HCCHHHHHHHCCCCEEECCCCHHHHHHHHHEECCCCCCCCEEEEECCCCCCCHHHHHHHH ERQGTALGFGEGNFQSLFEAIEREQQSRGTLEAERKPAFVQDAL HHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-hydroxyphenylpyruvate; O2
Specific reaction: 4-hydroxyphenylpyruvate + O2 = homogentisate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]