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The map label for this gene is bioC [C]

Identifier: 37522659

GI number: 37522659

Start: 3294527

End: 3295372

Strand: Direct

Name: bioC [C]

Synonym: glr3090

Alternate gene names: 37522659

Gene position: 3294527-3295372 (Clockwise)

Preceding gene: 37522658

Following gene: 37522660

Centisome position: 70.71

GC content: 66.31

Gene sequence:

>846_bases
ATGGGCGAGCGAACGGTTCTCAACGAAAATATCCGGCGGTTCTACGACGCGTCCTCCGGGTTGTGGGAGGAGGTCTGGGG
CGAGCACATGCACCACGGCCACTGGGAAGTGGGGGAAGCGGACAAAGATCGCCGCGTCGCCCAGGTGGATTTGGTCGTCA
GGCTCCTCGACTGGGCGGGGATCGACCGGGCCGAGTCGATCGTCGATGTCGGCTGCGGCATCGGCGGCAGCAGTCTGTTT
CTGGCGGAGCGCTTCGGCGCCCGGGTGGAGGGGATCACCCTCAGCCCCGTGCAGTGTAAGCGCGCCGCCGAGCGCGCCCG
CGAGCACCATCTGGACGGGCGCGCGCACTTTCAGGTGGCCGACGCCCACCGGATGCCCTTCGCCGACGGCCGGTTCGACC
TGGTCTGGTCGCTCGAAAGCGGTGAGCACATGGCCGACAAGGCCCAATTTTTGCGCGAATGCCACCGGGTGCTCAGGCCC
GGCGGCCGCTTCGTGTTTGTGACTTGGTGCTGTCGCCACGGCGCCTTGGACGCGCGGGATCAAAAATGGCTCGGGGCGAT
CTACCGGATCTACCACCTGCCCTACATCCTCTCGATCGAGAGCTACACGCAGTTGCTTGGTGAGACGGGGTTCTCGGGCA
TTCGGACCACCGACTGGTCCGATCGGGTGGCCCGCTTCTGGTCGCTGGTCATCGATTCGGCCCTCGAACCGGCGGTGCTG
TGGAAGGTGATCGCCCAGGGACCGACGGTAATCAAAGGCGCGCTCGCCATGCAGTTGATGCGGCGCAGCTACGCGCGGGG
GCTGGTGCGCTTCGGCGTGTTCGCGGCCCAAAAGGCGGAGGGATAA

Upstream 100 bases:

>100_bases
GGGCAGTATTGTTCGACGGACGGACACCTCTGGGAGGGCTGGAGACCGGCGGCGGTCCGTGGGACGGTGAGTGGCGTATT
TCTTGTTAGATGAGGCGGCA

Downstream 100 bases:

>100_bases
TGCTGCTGGGGTTCGCCTGGATGGAGTTGTTCGTCGAGTCGGCACAGGCGAGCGCCAATCGCCTCTGCGCCCAGATGGGC
TTTACCCCGGTGGGCTGCTT

Product: gamma-tocopherol methyltransferase

Products: NA

Alternate protein names: GPP methyltransferase [H]

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MGERTVLNENIRRFYDASSGLWEEVWGEHMHHGHWEVGEADKDRRVAQVDLVVRLLDWAGIDRAESIVDVGCGIGGSSLF
LAERFGARVEGITLSPVQCKRAAERAREHHLDGRAHFQVADAHRMPFADGRFDLVWSLESGEHMADKAQFLRECHRVLRP
GGRFVFVTWCCRHGALDARDQKWLGAIYRIYHLPYILSIESYTQLLGETGFSGIRTTDWSDRVARFWSLVIDSALEPAVL
WKVIAQGPTVIKGALAMQLMRRSYARGLVRFGVFAAQKAEG

Sequences:

>Translated_281_residues
MGERTVLNENIRRFYDASSGLWEEVWGEHMHHGHWEVGEADKDRRVAQVDLVVRLLDWAGIDRAESIVDVGCGIGGSSLF
LAERFGARVEGITLSPVQCKRAAERAREHHLDGRAHFQVADAHRMPFADGRFDLVWSLESGEHMADKAQFLRECHRVLRP
GGRFVFVTWCCRHGALDARDQKWLGAIYRIYHLPYILSIESYTQLLGETGFSGIRTTDWSDRVARFWSLVIDSALEPAVL
WKVIAQGPTVIKGALAMQLMRRSYARGLVRFGVFAAQKAEG
>Mature_280_residues
GERTVLNENIRRFYDASSGLWEEVWGEHMHHGHWEVGEADKDRRVAQVDLVVRLLDWAGIDRAESIVDVGCGIGGSSLFL
AERFGARVEGITLSPVQCKRAAERAREHHLDGRAHFQVADAHRMPFADGRFDLVWSLESGEHMADKAQFLRECHRVLRPG
GRFVFVTWCCRHGALDARDQKWLGAIYRIYHLPYILSIESYTQLLGETGFSGIRTTDWSDRVARFWSLVIDSALEPAVLW
KVIAQGPTVIKGALAMQLMRRSYARGLVRFGVFAAQKAEG

Specific function: Catalyzes the SAM-dependent methylation of geranyl diphosphate (GPP) to yield (E)-2-methylgeranyl diphosphate (2- MeGPP) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranyl diphosphate 2-C- methyltransferase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI25143945, Length=98, Percent_Identity=34.6938775510204, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17561380, Length=158, Percent_Identity=27.2151898734177, Blast_Score=77, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6323635, Length=219, Percent_Identity=25.5707762557078, Blast_Score=76, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003333 [H]

Pfam domain/function: PF02353 CMAS [H]

EC number: NA

Molecular weight: Translated: 31819; Mature: 31687

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGERTVLNENIRRFYDASSGLWEEVWGEHMHHGHWEVGEADKDRRVAQVDLVVRLLDWAG
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
IDRAESIVDVGCGIGGSSLFLAERFGARVEGITLSPVQCKRAAERAREHHLDGRAHFQVA
CCHHHHHHHHHCCCCCHHHHHHHHHCCEECCEEECHHHHHHHHHHHHHHCCCCCEEEEEE
DAHRMPFADGRFDLVWSLESGEHMADKAQFLRECHRVLRPGGRFVFVTWCCRHGALDARD
CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCCCCCCH
QKWLGAIYRIYHLPYILSIESYTQLLGETGFSGIRTTDWSDRVARFWSLVIDSALEPAVL
HHHHHHHHHHHHCCHHEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
WKVIAQGPTVIKGALAMQLMRRSYARGLVRFGVFAAQKAEG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GERTVLNENIRRFYDASSGLWEEVWGEHMHHGHWEVGEADKDRRVAQVDLVVRLLDWAG
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
IDRAESIVDVGCGIGGSSLFLAERFGARVEGITLSPVQCKRAAERAREHHLDGRAHFQVA
CCHHHHHHHHHCCCCCHHHHHHHHHCCEECCEEECHHHHHHHHHHHHHHCCCCCEEEEEE
DAHRMPFADGRFDLVWSLESGEHMADKAQFLRECHRVLRPGGRFVFVTWCCRHGALDARD
CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCCCCCCH
QKWLGAIYRIYHLPYILSIESYTQLLGETGFSGIRTTDWSDRVARFWSLVIDSALEPAVL
HHHHHHHHHHHHCCHHEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
WKVIAQGPTVIKGALAMQLMRRSYARGLVRFGVFAAQKAEG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]