Click here to switch to the map view.

The map label for this gene is yacP [H]

Identifier: 37522562

GI number: 37522562

Start: 3193470

End: 3193994

Strand: Direct

Name: yacP [H]

Synonym: glr2993

Alternate gene names: 37522562

Gene position: 3193470-3193994 (Clockwise)

Preceding gene: 37522557

Following gene: 37522563

Centisome position: 68.54

GC content: 63.81

Gene sequence:

>525_bases
GTGCAAACGATTTTACTGGTGGATGGCTACAACGTGGTCGGGGCCTGGCCCAGGCTGGCACGGCTGCGCGACCGCCACAG
TCTGGAAGCGGCCAGAAACGAGCTTGTCGAGCAACTGGCAGGCTACGCCAGTTTTCGCGGCTACCGCGCGGTGCTGGTCT
TCGACGCCCAATTGGTCACCTCGCCGCTGGTACGCGCGAGCGAGACGCCCCACCTTGAAGTGTGCTTTACCGATTACGAA
CAGACCGCCGACAGTTTTATCGAGCAGTACAGCTACCAGTTGCTGCGCGAGAACCGGCGTCGCCGGGTGATGGTGGCCAC
CTCCGACCGGGCGCAGCAGGTGCTCGTACTTGCCCAGGGGGCCGACTGGCTATCCTCCGAGCAGCTGCTCAAAGAAGTTG
AAGCCGCCCGCCGCCAGCTGCGCGAGGACCTGCGCAACCGCAAAGCCCGGCCAAGCAATAAACTCGCCGACCGACTCGAT
CCGACGGTGCGCGACAAACTTGCCCGTTGGCGCTTCGGCGAATAG

Upstream 100 bases:

>100_bases
AACCGCGCCCCCAGCGTTCGCGTCGCCTCGGCGTCGGGCAACAGGATTTTCATCGCCGAATGTGACAAGATTGATACAAA
GGCCCGTTTCCGAAGCGGCA

Downstream 100 bases:

>100_bases
GACGGCCGCCGTGTGGCTTGCAGTCAATATCGGCAACAGCCGCCAGCACTGGGGCTGGTTCACCGGAACAAAGCTGGTGC
GGACGCTGGATTTTCCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MQTILLVDGYNVVGAWPRLARLRDRHSLEAARNELVEQLAGYASFRGYRAVLVFDAQLVTSPLVRASETPHLEVCFTDYE
QTADSFIEQYSYQLLRENRRRRVMVATSDRAQQVLVLAQGADWLSSEQLLKEVEAARRQLREDLRNRKARPSNKLADRLD
PTVRDKLARWRFGE

Sequences:

>Translated_174_residues
MQTILLVDGYNVVGAWPRLARLRDRHSLEAARNELVEQLAGYASFRGYRAVLVFDAQLVTSPLVRASETPHLEVCFTDYE
QTADSFIEQYSYQLLRENRRRRVMVATSDRAQQVLVLAQGADWLSSEQLLKEVEAARRQLREDLRNRKARPSNKLADRLD
PTVRDKLARWRFGE
>Mature_174_residues
MQTILLVDGYNVVGAWPRLARLRDRHSLEAARNELVEQLAGYASFRGYRAVLVFDAQLVTSPLVRASETPHLEVCFTDYE
QTADSFIEQYSYQLLRENRRRRVMVATSDRAQQVLVLAQGADWLSSEQLLKEVEAARRQLREDLRNRKARPSNKLADRLD
PTVRDKLARWRFGE

Specific function: Unknown

COG id: COG3688

COG function: function code R; Predicted RNA-binding protein containing a PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010298 [H]

Pfam domain/function: PF05991 DUF901 [H]

EC number: NA

Molecular weight: Translated: 20190; Mature: 20190

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTILLVDGYNVVGAWPRLARLRDRHSLEAARNELVEQLAGYASFRGYRAVLVFDAQLVT
CCEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHH
SPLVRASETPHLEVCFTDYEQTADSFIEQYSYQLLRENRRRRVMVATSDRAQQVLVLAQG
HHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHEEEEEECC
ADWLSSEQLLKEVEAARRQLREDLRNRKARPSNKLADRLDPTVRDKLARWRFGE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MQTILLVDGYNVVGAWPRLARLRDRHSLEAARNELVEQLAGYASFRGYRAVLVFDAQLVT
CCEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHH
SPLVRASETPHLEVCFTDYEQTADSFIEQYSYQLLRENRRRRVMVATSDRAQQVLVLAQG
HHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHEEEEEECC
ADWLSSEQLLKEVEAARRQLREDLRNRKARPSNKLADRLDPTVRDKLARWRFGE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]