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The map label for this gene is hdrB2 [H]

Identifier: 37522514

GI number: 37522514

Start: 3142889

End: 3143785

Strand: Direct

Name: hdrB2 [H]

Synonym: glr2945

Alternate gene names: 37522514

Gene position: 3142889-3143785 (Clockwise)

Preceding gene: 37522513

Following gene: 37522515

Centisome position: 67.46

GC content: 66.33

Gene sequence:

>897_bases
ATGATCGCCACTCCCCTCAAATATGCCTACTATCCCGGCTGTGTCGCCCGCGGCGCCTGTCGGGAACTGTACACTTCCAC
CGCCTTGATCACCGAAGCCCTGGGCATCGAGCTGGTGGAACTCAAAAGTGCCTCCTGCTGCGGCGCGGGCACACTCAAAG
AAGATTCGCAGCGATTGCAAGACGCGGTCAACGCCCGCAACATCGCTCTGGCCGAGGAGCAGGGGCTGACCATGCTCACC
CAGTGCAGCACCTGCCAGGGGGTGCTGGGGGCGGTGAACGACAAGCTGCGCGCCGAGCGCGGCTCCGCCTACCGCGACGA
GATCAACGCCCTGCTGGCCCGGGGCGGCCACCACTACGACGGCTCGGTGGACGTGCGCCACCTGCTGTGGATCTTGCTGG
AGGACGTGGGGCTCGACAACTTGCGTGCCCGGGTGCGCCGTCCGCTCACGGGTCTGCGCTGCGGCAGCTTCTACGGCTGC
TATCTACTGCGTGCCCAGGCGCATCGGCGCGTAGACGACGCCTTCAATCCCCAGTCGCTGGAGAAGATCTTCGAAGCGCT
GGGGGCTACCCCCGTCTACTTCGAGGGCCGCACCAAGTGCTGCGGCTTTCCGCTGTCGAGTTACGACACGCCAACGTCTT
TTTCGATGGCGGCCGTTCGCCTGCAGGATGCCATCGACTGCGGGGCCGACTGCCTGGTCACCCCCTGTCCGCTCTGCCAC
CTCAACCTGGACGCCCGCCAACCCGAAGTCGAACGCCAGGTGGGCCGCAAGCTGGGTTTGCCCGTGCTGCATCTGCCGCA
GCTGGTGGGTCTTGCCCTGGGCCTCTCCCCCGAGCAGCTCGGCCTCGGGCGGCACATCGTTTCGACCCGGCCGGTGCTGG
AGCGGTTGGGACTTTAA

Upstream 100 bases:

>100_bases
TGGCCGCCAAGGGCAAGATGCCCCTGCGCCACCGGCCCATCGAGAATTGTGCGCAAGTGCGCGACTTGATCGAGGAAATC
CAGAAAGAAGACGCCCAATC

Downstream 100 bases:

>100_bases
GTCCGATGCGCTAACATCAAAAAGCCCAATTGCCGGACCGTCCCATGCGTCACCCTCAGTTACGCGAAGAACCCCGCCAC
CAGAAGGCCGCTGTCCTTCC

Product: succinate dehydrogenase chain C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MIATPLKYAYYPGCVARGACRELYTSTALITEALGIELVELKSASCCGAGTLKEDSQRLQDAVNARNIALAEEQGLTMLT
QCSTCQGVLGAVNDKLRAERGSAYRDEINALLARGGHHYDGSVDVRHLLWILLEDVGLDNLRARVRRPLTGLRCGSFYGC
YLLRAQAHRRVDDAFNPQSLEKIFEALGATPVYFEGRTKCCGFPLSSYDTPTSFSMAAVRLQDAIDCGADCLVTPCPLCH
LNLDARQPEVERQVGRKLGLPVLHLPQLVGLALGLSPEQLGLGRHIVSTRPVLERLGL

Sequences:

>Translated_298_residues
MIATPLKYAYYPGCVARGACRELYTSTALITEALGIELVELKSASCCGAGTLKEDSQRLQDAVNARNIALAEEQGLTMLT
QCSTCQGVLGAVNDKLRAERGSAYRDEINALLARGGHHYDGSVDVRHLLWILLEDVGLDNLRARVRRPLTGLRCGSFYGC
YLLRAQAHRRVDDAFNPQSLEKIFEALGATPVYFEGRTKCCGFPLSSYDTPTSFSMAAVRLQDAIDCGADCLVTPCPLCH
LNLDARQPEVERQVGRKLGLPVLHLPQLVGLALGLSPEQLGLGRHIVSTRPVLERLGL
>Mature_298_residues
MIATPLKYAYYPGCVARGACRELYTSTALITEALGIELVELKSASCCGAGTLKEDSQRLQDAVNARNIALAEEQGLTMLT
QCSTCQGVLGAVNDKLRAERGSAYRDEINALLARGGHHYDGSVDVRHLLWILLEDVGLDNLRARVRRPLTGLRCGSFYGC
YLLRAQAHRRVDDAFNPQSLEKIFEALGATPVYFEGRTKCCGFPLSSYDTPTSFSMAAVRLQDAIDCGADCLVTPCPLCH
LNLDARQPEVERQVGRKLGLPVLHLPQLVGLALGLSPEQLGLGRHIVSTRPVLERLGL

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 32468; Mature: 32468

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATPLKYAYYPGCVARGACRELYTSTALITEALGIELVELKSASCCGAGTLKEDSQRLQ
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHH
DAVNARNIALAEEQGLTMLTQCSTCQGVLGAVNDKLRAERGSAYRDEINALLARGGHHYD
HHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
GSVDVRHLLWILLEDVGLDNLRARVRRPLTGLRCGSFYGCYLLRAQAHRRVDDAFNPQSL
CCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
EKIFEALGATPVYFEGRTKCCGFPLSSYDTPTSFSMAAVRLQDAIDCGADCLVTPCPLCH
HHHHHHHCCCCEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEE
LNLDARQPEVERQVGRKLGLPVLHLPQLVGLALGLSPEQLGLGRHIVSTRPVLERLGL
ECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIATPLKYAYYPGCVARGACRELYTSTALITEALGIELVELKSASCCGAGTLKEDSQRLQ
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHH
DAVNARNIALAEEQGLTMLTQCSTCQGVLGAVNDKLRAERGSAYRDEINALLARGGHHYD
HHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
GSVDVRHLLWILLEDVGLDNLRARVRRPLTGLRCGSFYGCYLLRAQAHRRVDDAFNPQSL
CCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
EKIFEALGATPVYFEGRTKCCGFPLSSYDTPTSFSMAAVRLQDAIDCGADCLVTPCPLCH
HHHHHHHCCCCEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEE
LNLDARQPEVERQVGRKLGLPVLHLPQLVGLALGLSPEQLGLGRHIVSTRPVLERLGL
ECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]