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The map label for this gene is atpF

Identifier: 37522476

GI number: 37522476

Start: 3103508

End: 3104035

Strand: Reverse

Name: atpF

Synonym: gvip400

Alternate gene names: 37522476

Gene position: 3104035-3103508 (Counterclockwise)

Preceding gene: 37522477

Following gene: 37522475

Centisome position: 66.62

GC content: 64.96

Gene sequence:

>528_bases
ATGGATTGGATGCCGCTGGTTCTGGCTGCCGAGGAGGCCGAAAGCCGCGGGTTCAGCCTCAATCTGAACCTGCTCGAGAC
CAACATCATCAACATCGCCATTGTGTTTGGGTTGCTCATCTTCCTGGCGCGCGGCTACTTTGGCCGCGTGCTGGGCGAGC
GCAAGAGCGAGATCGAAAACGGCATCCGCGAGGTCGAAAACCGGGGCCGCCAGGCGGAGCAGGAACTGGCGACCGCCCGC
CAGAACCTCTCCCAGGCCCAGGTTCAAGCCCAGCAGATCCTCGCTTCTGCCCGCACCAACGCCGAGCGGGTGCGTGCCCA
GGTTCTCGATCAAGCCCAGATCGATATCGCCCGGGTGCGCGAGACAGTCGATCAAGACCTGCGCAACGAGCAGCAGCGCA
TCCTCACCCAGGTGCGCCTCAAAGTGGTGGGCGACGCCCTCGCCCGCCTGCGCGAGCGCCTGCCCGGCGAACTCGACGAG
GCCACCCAGCGCCGCCTGCTCGATCGCAGCATCCAATTACTGGACTAG

Upstream 100 bases:

>100_bases
AGCAGAAGCAGGCGGCTTTGGCCAGCCTGTCGGGGGAGGTGGAGGCGATCAGCCGCACCCTCAGCGAGAAGTTGTTGAGC
GATTCGGCCAGGAGGTTCTG

Downstream 100 bases:

>100_bases
ACCATGCAGCAAGGCAAAGACAGCGAACAGATAGCCCAGCGCTACGCCGAGGCACTCAAAGAACTCGCCCTTTCCGAGAC
GGGGCTTCTGGAGCAGTTTG

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MDWMPLVLAAEEAESRGFSLNLNLLETNIINIAIVFGLLIFLARGYFGRVLGERKSEIENGIREVENRGRQAEQELATAR
QNLSQAQVQAQQILASARTNAERVRAQVLDQAQIDIARVRETVDQDLRNEQQRILTQVRLKVVGDALARLRERLPGELDE
ATQRRLLDRSIQLLD

Sequences:

>Translated_175_residues
MDWMPLVLAAEEAESRGFSLNLNLLETNIINIAIVFGLLIFLARGYFGRVLGERKSEIENGIREVENRGRQAEQELATAR
QNLSQAQVQAQQILASARTNAERVRAQVLDQAQIDIARVRETVDQDLRNEQQRILTQVRLKVVGDALARLRERLPGELDE
ATQRRLLDRSIQLLD
>Mature_175_residues
MDWMPLVLAAEEAESRGFSLNLNLLETNIINIAIVFGLLIFLARGYFGRVLGERKSEIENGIREVENRGRQAEQELATAR
QNLSQAQVQAQQILASARTNAERVRAQVLDQAQIDIARVRETVDQDLRNEQQRILTQVRLKVVGDALARLRERLPGELDE
ATQRRLLDRSIQLLD

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_GLOVI (Q7NCS1)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_925853.1
- GeneID:   2601308
- GenomeReviews:   BA000045_GR
- NMPDR:   fig|251221.1.peg.2907
- HOGENOM:   HBG708990
- OMA:   ESIRMES
- ProtClustDB:   PRK07352
- BioCyc:   GVIO251221:GLL2907-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 19911; Mature: 19911

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x159b2844)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWMPLVLAAEEAESRGFSLNLNLLETNIINIAIVFGLLIFLARGYFGRVLGERKSEIEN
CCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIREVENRGRQAEQELATARQNLSQAQVQAQQILASARTNAERVRAQVLDQAQIDIARVR
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ETVDQDLRNEQQRILTQVRLKVVGDALARLRERLPGELDEATQRRLLDRSIQLLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MDWMPLVLAAEEAESRGFSLNLNLLETNIINIAIVFGLLIFLARGYFGRVLGERKSEIEN
CCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIREVENRGRQAEQELATARQNLSQAQVQAQQILASARTNAERVRAQVLDQAQIDIARVR
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ETVDQDLRNEQQRILTQVRLKVVGDALARLRERLPGELDEATQRRLLDRSIQLLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292