| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is arnT [H]
Identifier: 37522273
GI number: 37522273
Start: 2862960
End: 2864708
Strand: Reverse
Name: arnT [H]
Synonym: gll2704
Alternate gene names: 37522273
Gene position: 2864708-2862960 (Counterclockwise)
Preceding gene: 37522276
Following gene: 37522270
Centisome position: 61.49
GC content: 62.66
Gene sequence:
>1749_bases ATGGCAAGCAGACTGTCCACTGCCTCAAGACCCGTTACCTTCGGTGCGCTCCTGGCGATGGCCTCGGGGGTCTTTGGCCT GCTGCTGGCGGCCTATCTGCCCTTTATCGGTTCGCTGCATCTCTTTGATTGGGACGAGTTGATCTTCGCGGAAGCTGCCC GTGAGATGGTCGAGCGCAACGATTATCTGCGGGTTTTCGTCAATTACGTGCCGTTTTTTGAGAAGCCGCCAGGTTTTTTC TGGCTGCAGGCGCTGAGCTTTCACTGGTTCGGCGTCAGCGAAGGGGCAGCCCGGCTGCCGAGCACCATCTTCACCGCCGC CACCGGGGCACTGGTGTTTCTGGCCGGCAGTTTTATCGTCTCGCCCGGCTTCGGGTTTTTGTGGGCGGCTCTCTTTGGAC TGGGGATTTTGCCCGCAGTACAGGGTAAGCTCGGCCTCATCGATCCGACCTTCAACTTTTTTGTACTGAGCAGCCTGGTG TGTCTATTTGCCTACGACGAGGGGCACCGTAGCGATTGGCTCGATCCGCCGATTCCCCGGCCCGGCCGGCTGCCGGGGGG CTATCTGGGGTTGGCGTCTGTGTGCCTGGGCTTTGCGGTGCTCGTCAAAGGACCGCTCGCCCTGGCCATCGTCATCCCTG GCTTTGCGATCTACAAAATCTTTGTCTCCAGACCGCGACTTTCGCCGTGGTCGGTGGGCCTGGGCCTGCTCGCGGCGCTC GCGGTGGCGGGTTCCTGGTTTGCCCTGGAGACCCTGGCCCACGGCCCGGCCTTTGTCGGCGAATTTGTCACCTATCAATT GCGGATCACCGGTACCAACGACGGCCACCCCGGCGTGCCCTTTTTCCACACCCTCGTCTTTTTACTGGGCTGTTTCCCGT TTTCGATTTTTCTGCTGCGCGGGATTAGCGAACGGGCTTTCTATCGCGAGCGGCGCTTTCAGATCCTGGCGATGGTGCTG TTTGTCCTGATCCTGGTGCTTTTTGAGGTTCTGGTCAAAACCAAGCTCATCCACTACGCCTCGCTGTTGCAGGTGCCGGG GGCATTTCTGGCCGCGCGCATTCTCTACCGGTTGCAGCAGGGAAAACTGCGCCCCCATCCGCTGGAACTGGCGGCCCTGG TGCTCGTGGCCCTGGTGCTGGCAGCCCCGATGCTCGCGCTGCCCTATATCGGCAACCACCCGGCGCTGCTGGAACCTTAT CTGGACGATCCGTCCGCCCGCGCTTACCTCGATACCCCCGTCGATTGGGGCTGGTTGACCTACGGACCCGGCCTCTGGCT GATCGCAGCCACTCTGTTCACCGTCGTCTGCTTTGGGCTGGGGCGCGGGCGCCTCGCCGTTGCAGGACTGCTGGCCACCG GCGGCGTCACGGCCAACCTGGTCTGGATCGTCTTCATGGCCAGGGTCGACGCCTACGTCTCCACACCCCAGGTGCAGTAC ATCGACCGGGTGGGCCGCTCGCCGCTGGCGTTCTATGGACCGCTAACCTACCTGCCGCCTTTCTATGCCCGGCGGCGGGT CGCCAACCCCCGCTCTCCTGAGCAACTGGCCCGCCTGTTGCGCAGCGAGCCGAGTTTGTGGGTAGTGGCGCGGCAGTCGG AAGTCGGACAGATCGCCTCGCTGTCGCAACTGAAAGTACAAAACCGCTACGGGGCCTATCTGCTGCTGGGACCCGCCCAG ACAGAGCAGCAAAGAGACGACCAGTTCGCCTCTTGGACCCCTCCCCCGCTAGGCAGGGGAGGGGAGTAA
Upstream 100 bases:
>100_bases CACCAGCCCAAGCCCTATACCCCGCACCGCTGTTCGCCCCCGATTGTACCAGCGCCGTTAAATTTGCTAACTTGCCACTG ATCCCTGGCTGCAGAATGTC
Downstream 100 bases:
>100_bases GGCCGGTGGGAGTTAGTTGGACTGGGCGGCGGTGGTGTCCACCGTCTCGGCCAGTTTGACTTTCACGACGCGCTGGGACT CGACTTTGGGCAGGGTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Polymyxin resistance protein pmrK; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 582; Mature: 581
Protein sequence:
>582_residues MASRLSTASRPVTFGALLAMASGVFGLLLAAYLPFIGSLHLFDWDELIFAEAAREMVERNDYLRVFVNYVPFFEKPPGFF WLQALSFHWFGVSEGAARLPSTIFTAATGALVFLAGSFIVSPGFGFLWAALFGLGILPAVQGKLGLIDPTFNFFVLSSLV CLFAYDEGHRSDWLDPPIPRPGRLPGGYLGLASVCLGFAVLVKGPLALAIVIPGFAIYKIFVSRPRLSPWSVGLGLLAAL AVAGSWFALETLAHGPAFVGEFVTYQLRITGTNDGHPGVPFFHTLVFLLGCFPFSIFLLRGISERAFYRERRFQILAMVL FVLILVLFEVLVKTKLIHYASLLQVPGAFLAARILYRLQQGKLRPHPLELAALVLVALVLAAPMLALPYIGNHPALLEPY LDDPSARAYLDTPVDWGWLTYGPGLWLIAATLFTVVCFGLGRGRLAVAGLLATGGVTANLVWIVFMARVDAYVSTPQVQY IDRVGRSPLAFYGPLTYLPPFYARRRVANPRSPEQLARLLRSEPSLWVVARQSEVGQIASLSQLKVQNRYGAYLLLGPAQ TEQQRDDQFASWTPPPLGRGGE
Sequences:
>Translated_582_residues MASRLSTASRPVTFGALLAMASGVFGLLLAAYLPFIGSLHLFDWDELIFAEAAREMVERNDYLRVFVNYVPFFEKPPGFF WLQALSFHWFGVSEGAARLPSTIFTAATGALVFLAGSFIVSPGFGFLWAALFGLGILPAVQGKLGLIDPTFNFFVLSSLV CLFAYDEGHRSDWLDPPIPRPGRLPGGYLGLASVCLGFAVLVKGPLALAIVIPGFAIYKIFVSRPRLSPWSVGLGLLAAL AVAGSWFALETLAHGPAFVGEFVTYQLRITGTNDGHPGVPFFHTLVFLLGCFPFSIFLLRGISERAFYRERRFQILAMVL FVLILVLFEVLVKTKLIHYASLLQVPGAFLAARILYRLQQGKLRPHPLELAALVLVALVLAAPMLALPYIGNHPALLEPY LDDPSARAYLDTPVDWGWLTYGPGLWLIAATLFTVVCFGLGRGRLAVAGLLATGGVTANLVWIVFMARVDAYVSTPQVQY IDRVGRSPLAFYGPLTYLPPFYARRRVANPRSPEQLARLLRSEPSLWVVARQSEVGQIASLSQLKVQNRYGAYLLLGPAQ TEQQRDDQFASWTPPPLGRGGE >Mature_581_residues ASRLSTASRPVTFGALLAMASGVFGLLLAAYLPFIGSLHLFDWDELIFAEAAREMVERNDYLRVFVNYVPFFEKPPGFFW LQALSFHWFGVSEGAARLPSTIFTAATGALVFLAGSFIVSPGFGFLWAALFGLGILPAVQGKLGLIDPTFNFFVLSSLVC LFAYDEGHRSDWLDPPIPRPGRLPGGYLGLASVCLGFAVLVKGPLALAIVIPGFAIYKIFVSRPRLSPWSVGLGLLAALA VAGSWFALETLAHGPAFVGEFVTYQLRITGTNDGHPGVPFFHTLVFLLGCFPFSIFLLRGISERAFYRERRFQILAMVLF VLILVLFEVLVKTKLIHYASLLQVPGAFLAARILYRLQQGKLRPHPLELAALVLVALVLAAPMLALPYIGNHPALLEPYL DDPSARAYLDTPVDWGWLTYGPGLWLIAATLFTVVCFGLGRGRLAVAGLLATGGVTANLVWIVFMARVDAYVSTPQVQYI DRVGRSPLAFYGPLTYLPPFYARRRVANPRSPEQLARLLRSEPSLWVVARQSEVGQIASLSQLKVQNRYGAYLLLGPAQT EQQRDDQFASWTPPPLGRGGE
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 63811; Mature: 63679
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRLSTASRPVTFGALLAMASGVFGLLLAAYLPFIGSLHLFDWDELIFAEAAREMVERN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHCC DYLRVFVNYVPFFEKPPGFFWLQALSFHWFGVSEGAARLPSTIFTAATGALVFLAGSFIV CHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHC SPGFGFLWAALFGLGILPAVQGKLGLIDPTFNFFVLSSLVCLFAYDEGHRSDWLDPPIPR CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PGRLPGGYLGLASVCLGFAVLVKGPLALAIVIPGFAIYKIFVSRPRLSPWSVGLGLLAAL CCCCCCHHHHHHHHHHHHHHHHCCCHHEEHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHH AVAGSWFALETLAHGPAFVGEFVTYQLRITGTNDGHPGVPFFHTLVFLLGCFPFSIFLLR HHHCCHHHHHHHHCCHHHHHCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH GISERAFYRERRFQILAMVLFVLILVLFEVLVKTKLIHYASLLQVPGAFLAARILYRLQQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GKLRPHPLELAALVLVALVLAAPMLALPYIGNHPALLEPYLDDPSARAYLDTPVDWGWLT CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCEEECCCCCCCCEE YGPGLWLIAATLFTVVCFGLGRGRLAVAGLLATGGVTANLVWIVFMARVDAYVSTPQVQY ECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHH IDRVGRSPLAFYGPLTYLPPFYARRRVANPRSPEQLARLLRSEPSLWVVARQSEVGQIAS HHHCCCCCCCCCCCHHHCCCHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHH LSQLKVQNRYGAYLLLGPAQTEQQRDDQFASWTPPPLGRGGE HHHHHHHCCCCCEEEECCCCCHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure ASRLSTASRPVTFGALLAMASGVFGLLLAAYLPFIGSLHLFDWDELIFAEAAREMVERN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHCC DYLRVFVNYVPFFEKPPGFFWLQALSFHWFGVSEGAARLPSTIFTAATGALVFLAGSFIV CHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHC SPGFGFLWAALFGLGILPAVQGKLGLIDPTFNFFVLSSLVCLFAYDEGHRSDWLDPPIPR CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PGRLPGGYLGLASVCLGFAVLVKGPLALAIVIPGFAIYKIFVSRPRLSPWSVGLGLLAAL CCCCCCHHHHHHHHHHHHHHHHCCCHHEEHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHH AVAGSWFALETLAHGPAFVGEFVTYQLRITGTNDGHPGVPFFHTLVFLLGCFPFSIFLLR HHHCCHHHHHHHHCCHHHHHCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH GISERAFYRERRFQILAMVLFVLILVLFEVLVKTKLIHYASLLQVPGAFLAARILYRLQQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GKLRPHPLELAALVLVALVLAAPMLALPYIGNHPALLEPYLDDPSARAYLDTPVDWGWLT CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCEEECCCCCCCCEE YGPGLWLIAATLFTVVCFGLGRGRLAVAGLLATGGVTANLVWIVFMARVDAYVSTPQVQY ECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHH IDRVGRSPLAFYGPLTYLPPFYARRRVANPRSPEQLARLLRSEPSLWVVARQSEVGQIAS HHHCCCCCCCCCCCHHHCCCHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHH LSQLKVQNRYGAYLLLGPAQTEQQRDDQFASWTPPPLGRGGE HHHHHHHCCCCCEEEECCCCCHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]