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The map label for this gene is clpC [H]

Identifier: 37522157

GI number: 37522157

Start: 2741676

End: 2742722

Strand: Reverse

Name: clpC [H]

Synonym: gll2588

Alternate gene names: 37522157

Gene position: 2742722-2741676 (Counterclockwise)

Preceding gene: 37522163

Following gene: 37522155

Centisome position: 58.87

GC content: 64.37

Gene sequence:

>1047_bases
ATGTTTGGAACGCTTGCGGGCGAATTTACCGACAGCGCCCGCCGGGTGCTCGACTGTGCCCGCACCGAAGCGCAGCGGCT
GGGTTATCAGTTTGTGAGTACCGAGCATCTGCTGCTGGGACTGCTCGCGGAAGGCCACAGCGAAGAAGCAAAAGTGCTCA
CCGAAATGGGCCTGCACCTCGATGCGACCCGTCGCCTCGTCGAGCGGCTGATCGGCCGCGGCTCCGGGCTGGTGCCCAAG
GAGATGCCCTTCACGCCGCGCGCCCGCTACGCCTGGGAGATCGCCTTCGATCAGTCCGAGCAACTGCGCCACAGCCACAT
GGATACCTGCCATATCTTTTTTGGGCTGGTGCGCGAATGCCTCTTTGCCGGCAAGCGCGGCGGCGGGGCGGCGAGTGTTT
TTCGTCATCTCAACATCGACCTGCGCGAACTTGAAAAACGGGCGGGCATCCTGGTGGCCGCTTTCGGTGCAGCCGCCACC
CAGACTTTGAACCGGGTAGCAGCGGACGATGAGGACGAGTGGAACGAACCCATCGTGATCGCTGCCCAGAATCACCCGCC
GGTGTTGGTGCATCCGTTGTCCGCCCCGGCTCTGGTGCAGGAGATCTATCCGGCCCAGATCGCGGCGGGGGAAGTGCGCA
CGCGGCTGAGCGCGGCTCTGCTGGACTGGGTGGAAGCGCACCGCCTTGGCCACGTCTCCACCACCAGCCCCATCCTGGCC
GGCAGCGATGTGCTGGTGGCCGATGTACTCTATTTTTCGCGCGAGCGCTTGTACGCGGGCAATTCGCGCGTCCCGGATCT
GGCGGCGCTGGTGGTGGAACGGCCCGATGACACGAGGCAGTTGCGCGTCCTGGCGGCGAAGATGCGTCTATTGCTGGAGT
TGGGGGTGCAGGTGGGATGGATGGCCGATCCCCACGGACGCAGTATCAGCGTTTTTTATCCCGGCAAGCACAAAGCGGCG
ATCCTCAAAGAGGACGATGTGTTGCGGCTGCCGGAGTTGCTCGCGGGCTGGGAGGTTCCCGTCGCCCGCCTCTGGCCGTC
CAATTAG

Upstream 100 bases:

>100_bases
TTCGTGCATCGTAACGTACCGTGGGCCTAGAATCGGGGCCGTTTCATCGCTAGAAGCAAGAGCCTTTTCGGGTGGCCGAG
CCATGCCTGAATCTTCGACG

Downstream 100 bases:

>100_bases
GAGTCAGGCGTGGGCGATGGGCATTCGCCAGCCGATGCCGAAGGCGCGCGGCGAGACGCGCAGACCCGGCGGCAGTTGCT
TGCGTTTGAACTCGGCCCGG

Product: endopeptidase Clp ATP-binding chain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MFGTLAGEFTDSARRVLDCARTEAQRLGYQFVSTEHLLLGLLAEGHSEEAKVLTEMGLHLDATRRLVERLIGRGSGLVPK
EMPFTPRARYAWEIAFDQSEQLRHSHMDTCHIFFGLVRECLFAGKRGGGAASVFRHLNIDLRELEKRAGILVAAFGAAAT
QTLNRVAADDEDEWNEPIVIAAQNHPPVLVHPLSAPALVQEIYPAQIAAGEVRTRLSAALLDWVEAHRLGHVSTTSPILA
GSDVLVADVLYFSRERLYAGNSRVPDLAALVVERPDDTRQLRVLAAKMRLLLELGVQVGWMADPHGRSISVFYPGKHKAA
ILKEDDVLRLPELLAGWEVPVARLWPSN

Sequences:

>Translated_348_residues
MFGTLAGEFTDSARRVLDCARTEAQRLGYQFVSTEHLLLGLLAEGHSEEAKVLTEMGLHLDATRRLVERLIGRGSGLVPK
EMPFTPRARYAWEIAFDQSEQLRHSHMDTCHIFFGLVRECLFAGKRGGGAASVFRHLNIDLRELEKRAGILVAAFGAAAT
QTLNRVAADDEDEWNEPIVIAAQNHPPVLVHPLSAPALVQEIYPAQIAAGEVRTRLSAALLDWVEAHRLGHVSTTSPILA
GSDVLVADVLYFSRERLYAGNSRVPDLAALVVERPDDTRQLRVLAAKMRLLLELGVQVGWMADPHGRSISVFYPGKHKAA
ILKEDDVLRLPELLAGWEVPVARLWPSN
>Mature_348_residues
MFGTLAGEFTDSARRVLDCARTEAQRLGYQFVSTEHLLLGLLAEGHSEEAKVLTEMGLHLDATRRLVERLIGRGSGLVPK
EMPFTPRARYAWEIAFDQSEQLRHSHMDTCHIFFGLVRECLFAGKRGGGAASVFRHLNIDLRELEKRAGILVAAFGAAAT
QTLNRVAADDEDEWNEPIVIAAQNHPPVLVHPLSAPALVQEIYPAQIAAGEVRTRLSAALLDWVEAHRLGHVSTTSPILA
GSDVLVADVLYFSRERLYAGNSRVPDLAALVVERPDDTRQLRVLAAKMRLLLELGVQVGWMADPHGRSISVFYPGKHKAA
ILKEDDVLRLPELLAGWEVPVARLWPSN

Specific function: Unknown

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 UVR domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR004176
- InterPro:   IPR023150
- InterPro:   IPR001943 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF02861 Clp_N; PF10431 ClpB_D2-small; PF02151 UVR [H]

EC number: NA

Molecular weight: Translated: 38447; Mature: 38447

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGTLAGEFTDSARRVLDCARTEAQRLGYQFVSTEHLLLGLLAEGHSEEAKVLTEMGLHL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCH
DATRRLVERLIGRGSGLVPKEMPFTPRARYAWEIAFDQSEQLRHSHMDTCHIFFGLVREC
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHCCHHHHHHHHHHHHH
LFAGKRGGGAASVFRHLNIDLRELEKRAGILVAAFGAAATQTLNRVAADDEDEWNEPIVI
HHCCCCCCCHHHHHHHCCCCHHHHHHHCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCEEE
AAQNHPPVLVHPLSAPALVQEIYPAQIAAGEVRTRLSAALLDWVEAHRLGHVSTTSPILA
EECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GSDVLVADVLYFSRERLYAGNSRVPDLAALVVERPDDTRQLRVLAAKMRLLLELGVQVGW
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCCE
MADPHGRSISVFYPGKHKAAILKEDDVLRLPELLAGWEVPVARLWPSN
EECCCCCEEEEEECCCCCEEEECCCCCHHHHHHHCCCCCCHHHCCCCC
>Mature Secondary Structure
MFGTLAGEFTDSARRVLDCARTEAQRLGYQFVSTEHLLLGLLAEGHSEEAKVLTEMGLHL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCH
DATRRLVERLIGRGSGLVPKEMPFTPRARYAWEIAFDQSEQLRHSHMDTCHIFFGLVREC
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHCCHHHHHHHHHHHHH
LFAGKRGGGAASVFRHLNIDLRELEKRAGILVAAFGAAATQTLNRVAADDEDEWNEPIVI
HHCCCCCCCHHHHHHHCCCCHHHHHHHCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCEEE
AAQNHPPVLVHPLSAPALVQEIYPAQIAAGEVRTRLSAALLDWVEAHRLGHVSTTSPILA
EECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GSDVLVADVLYFSRERLYAGNSRVPDLAALVVERPDDTRQLRVLAAKMRLLLELGVQVGW
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCCE
MADPHGRSISVFYPGKHKAAILKEDDVLRLPELLAGWEVPVARLWPSN
EECCCCCEEEEEECCCCCEEEECCCCCHHHHHHHCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]