| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is cbiX [H]
Identifier: 37522148
GI number: 37522148
Start: 2733071
End: 2733871
Strand: Direct
Name: cbiX [H]
Synonym: glr2579
Alternate gene names: 37522148
Gene position: 2733071-2733871 (Clockwise)
Preceding gene: 37522143
Following gene: 37522149
Centisome position: 58.66
GC content: 62.67
Gene sequence:
>801_bases ATGGCTGGCGTCGCCAGCTCTGGGGTTTTGCACATGAATGCAGCACTTTCGACGCCGACGACGGTTTTCTTGTGTGGCCA CGGCAGTTCCGACCGGCGCTCCTGTCTTGCCTTTGGCGAGCTGGTCGAGCGCTTCCGGCGCTACTCCAATTTCCGGATCG TCTCGGGGACGCTCGAATTTTCCGAGCGGCTGCTCGATGAGCAGATTGCCCTGCAGGTTGCGCCGGGCCACCGGTTTGTG CTGTTGCCGTTGTTTTTGGCCCCGGGGATGCACGTCGGGGAGGATCTGACCGAAGCGCTCCGCCGTGCCCGCCGCGCCCA TCCGCAGGTGAACTTTTTGCACACCCCCTGCCTGGGCGAGCACGAATCGATGGAGGCAATCTTGAGCGAGCGGGTCCGCC GCTTGGCCGGACGCACCGACGAGCACACCGCCGTGGTGATCCTCGCCCACGGCAGCCGCCGCGAGGAGGCCAACCGCCTG GTGCAGGACATCGCCGACGGCGTCTGGGAGAACCTGGGCGGCCCTCTGGTGACCGCCGCCTTCTGGAAAATCCAGCCCGA TTTGCGCCACACGCTGCGCGAACTGGTGCACCCTTCGATCCGGCGGGTGTTGATATTGCCCTATTTTTTGTTCGAAGGCG GCATGACCGACCGCATCACCTGGGAAGTCGACCGACTCGCAAACGAATTTCCCAAATTCGACCTGCAACTGGATACAGTG TTGGGACCGGATAATCACCTGCTGCCGCTGATGCAGGATCTGGTGGAAAAGACACTGGAGTCCGCTTTTGCCATCGCCTA G
Upstream 100 bases:
>100_bases TTCTACAACAAAGTGGCTTTGCAGGCGAGTTTGGGGCGGGTTGTATCCGGGTGTAGCTGAACGGATTCGGGCCTTGGGGT AGGCTGGGGATCGGTGGCGC
Downstream 100 bases:
>100_bases AGGAAAAGTCTACCTGGTGGGGGCCGGACCGGGCGATCCCGGACTTTTGACTGTGCGCGGCAAGACCCTCATCGAGCACT GCGATGCGATTGTCTACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: CbiXL [H]
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MAGVASSGVLHMNAALSTPTTVFLCGHGSSDRRSCLAFGELVERFRRYSNFRIVSGTLEFSERLLDEQIALQVAPGHRFV LLPLFLAPGMHVGEDLTEALRRARRAHPQVNFLHTPCLGEHESMEAILSERVRRLAGRTDEHTAVVILAHGSRREEANRL VQDIADGVWENLGGPLVTAAFWKIQPDLRHTLRELVHPSIRRVLILPYFLFEGGMTDRITWEVDRLANEFPKFDLQLDTV LGPDNHLLPLMQDLVEKTLESAFAIA
Sequences:
>Translated_266_residues MAGVASSGVLHMNAALSTPTTVFLCGHGSSDRRSCLAFGELVERFRRYSNFRIVSGTLEFSERLLDEQIALQVAPGHRFV LLPLFLAPGMHVGEDLTEALRRARRAHPQVNFLHTPCLGEHESMEAILSERVRRLAGRTDEHTAVVILAHGSRREEANRL VQDIADGVWENLGGPLVTAAFWKIQPDLRHTLRELVHPSIRRVLILPYFLFEGGMTDRITWEVDRLANEFPKFDLQLDTV LGPDNHLLPLMQDLVEKTLESAFAIA >Mature_265_residues AGVASSGVLHMNAALSTPTTVFLCGHGSSDRRSCLAFGELVERFRRYSNFRIVSGTLEFSERLLDEQIALQVAPGHRFVL LPLFLAPGMHVGEDLTEALRRARRAHPQVNFLHTPCLGEHESMEAILSERVRRLAGRTDEHTAVVILAHGSRREEANRLV QDIADGVWENLGGPLVTAAFWKIQPDLRHTLRELVHPSIRRVLILPYFLFEGGMTDRITWEVDRLANEFPKFDLQLDTVL GPDNHLLPLMQDLVEKTLESAFAIA
Specific function: Chelates cobalt to the cobalamin precursor as part of the anaerobic pathway to cobalamin biosynthesis [H]
COG id: COG2138
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CbiX family. CbiXL subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002762 [H]
Pfam domain/function: PF01903 CbiX [H]
EC number: =4.99.1.3 [H]
Molecular weight: Translated: 29872; Mature: 29741
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGVASSGVLHMNAALSTPTTVFLCGHGSSDRRSCLAFGELVERFRRYSNFRIVSGTLEF CCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECHHHH SERLLDEQIALQVAPGHRFVLLPLFLAPGMHVGEDLTEALRRARRAHPQVNFLHTPCLGE HHHHHHHHHEEEECCCCEEEEHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCC HESMEAILSERVRRLAGRTDEHTAVVILAHGSRREEANRLVQDIADGVWENLGGPLVTAA HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH FWKIQPDLRHTLRELVHPSIRRVLILPYFLFEGGMTDRITWEVDRLANEFPKFDLQLDTV HHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCEEEEEE LGPDNHLLPLMQDLVEKTLESAFAIA ECCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AGVASSGVLHMNAALSTPTTVFLCGHGSSDRRSCLAFGELVERFRRYSNFRIVSGTLEF CCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECHHHH SERLLDEQIALQVAPGHRFVLLPLFLAPGMHVGEDLTEALRRARRAHPQVNFLHTPCLGE HHHHHHHHHEEEECCCCEEEEHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCC HESMEAILSERVRRLAGRTDEHTAVVILAHGSRREEANRLVQDIADGVWENLGGPLVTAA HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH FWKIQPDLRHTLRELVHPSIRRVLILPYFLFEGGMTDRITWEVDRLANEFPKFDLQLDTV HHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCEEEEEE LGPDNHLLPLMQDLVEKTLESAFAIA ECCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 12917443 [H]