Click here to switch to the map view.

The map label for this gene is ykwD [H]

Identifier: 37521932

GI number: 37521932

Start: 2525606

End: 2526214

Strand: Direct

Name: ykwD [H]

Synonym: glr2363

Alternate gene names: 37521932

Gene position: 2525606-2526214 (Clockwise)

Preceding gene: 37521928

Following gene: 37521934

Centisome position: 54.21

GC content: 62.23

Gene sequence:

>609_bases
GTGGGCGAGAAAGGTACTTCCGTGCATCTGTTTGGCCGCAACGTCTTCGTGTGGTTGGTCGCTGCTTTCGGTTCGTTCCT
CGCTCTGGCCGGCTGCCAGACCGTCGGGGATCTGACCACCGAGGCAAAAGCCTTTGTAGAGCGGGCGGCAGCGCCCTCCC
AACCGCCCGCCCCGGGGACTGAGAAGCCCCAGACGGACGCCCTGGGCCAGATGGAGGAGCGCATCGTGCGCGACATCAAC
GCGATCCGCGAGCGCAACGACCTCGCACCCCTCAAGCCCAACGCCAAGCTCGCCCGAGTGGCCCGTAACTACAGCCGATT
GATGGCCGAGCAGAACTTTTTCAGCCATACCGGCCCCAAAGGCGACAGCGTCGCCGACCGGGTGCGCTCGGCAGGAATCT
TTTATCTGGTGGTGGGCGAGAACCTGGCCTACGTCAGCGGCTCGAAGCGACCGGTCGAAATCGCGGTACAAGGCTGGATG
AAAAGCCCCGGCCACCGCGAGAACATCCTGCGGCCGGTGTACATGGAGACCGGGATAGGTGCCTGGAAAAAGGGCAACAA
AATATACTACACGCAAGTATTTCTCACCCAGGTCTCGCTAAGACGCTAG

Upstream 100 bases:

>100_bases
CTGATAAAAGCAAACATCGCGACTATTTCAGAGGACAGAAGCCAAAACAGGTATTCATTTCATAGCATGGGAAACATAGA
CAACTTTCGTTCCAGTATTC

Downstream 100 bases:

>100_bases
TCGCTGGAGTCAACCATGAAAGATCCCGCCGAAGTGCTCGTCGCCCATTGCGATGCACTGGATGAAGGCGCAATAGGTAT
TGCGCCGGGGGCCGGTGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MGEKGTSVHLFGRNVFVWLVAAFGSFLALAGCQTVGDLTTEAKAFVERAAAPSQPPAPGTEKPQTDALGQMEERIVRDIN
AIRERNDLAPLKPNAKLARVARNYSRLMAEQNFFSHTGPKGDSVADRVRSAGIFYLVVGENLAYVSGSKRPVEIAVQGWM
KSPGHRENILRPVYMETGIGAWKKGNKIYYTQVFLTQVSLRR

Sequences:

>Translated_202_residues
MGEKGTSVHLFGRNVFVWLVAAFGSFLALAGCQTVGDLTTEAKAFVERAAAPSQPPAPGTEKPQTDALGQMEERIVRDIN
AIRERNDLAPLKPNAKLARVARNYSRLMAEQNFFSHTGPKGDSVADRVRSAGIFYLVVGENLAYVSGSKRPVEIAVQGWM
KSPGHRENILRPVYMETGIGAWKKGNKIYYTQVFLTQVSLRR
>Mature_201_residues
GEKGTSVHLFGRNVFVWLVAAFGSFLALAGCQTVGDLTTEAKAFVERAAAPSQPPAPGTEKPQTDALGQMEERIVRDINA
IRERNDLAPLKPNAKLARVARNYSRLMAEQNFFSHTGPKGDSVADRVRSAGIFYLVVGENLAYVSGSKRPVEIAVQGWMK
SPGHRENILRPVYMETGIGAWKKGNKIYYTQVFLTQVSLRR

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 22267; Mature: 22136

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEKGTSVHLFGRNVFVWLVAAFGSFLALAGCQTVGDLTTEAKAFVERAAAPSQPPAPGT
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
EKPQTDALGQMEERIVRDINAIRERNDLAPLKPNAKLARVARNYSRLMAEQNFFSHTGPK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
GDSVADRVRSAGIFYLVVGENLAYVSGSKRPVEIAVQGWMKSPGHRENILRPVYMETGIG
CCHHHHHHHHCCEEEEEECCCEEEECCCCCCEEEEEECHHCCCCCHHHCCCHHHHHCCCC
AWKKGNKIYYTQVFLTQVSLRR
CCCCCCEEEEEHHEEHHHHHCC
>Mature Secondary Structure 
GEKGTSVHLFGRNVFVWLVAAFGSFLALAGCQTVGDLTTEAKAFVERAAAPSQPPAPGT
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
EKPQTDALGQMEERIVRDINAIRERNDLAPLKPNAKLARVARNYSRLMAEQNFFSHTGPK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
GDSVADRVRSAGIFYLVVGENLAYVSGSKRPVEIAVQGWMKSPGHRENILRPVYMETGIG
CCHHHHHHHHCCEEEEEECCCEEEECCCCCCEEEEEECHHCCCCCHHHCCCHHHHHCCCC
AWKKGNKIYYTQVFLTQVSLRR
CCCCCCEEEEEHHEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]