| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is est [H]
Identifier: 37521578
GI number: 37521578
Start: 2158611
End: 2159375
Strand: Reverse
Name: est [H]
Synonym: gll2009
Alternate gene names: 37521578
Gene position: 2159375-2158611 (Counterclockwise)
Preceding gene: 37521581
Following gene: 37521576
Centisome position: 46.35
GC content: 64.31
Gene sequence:
>765_bases ATGCATCCGATGCTGGAGAACAAGCCCTTTTTTCTCAAAGCTTCCGCCGAGCGCGTGTGCCTATTGCTGCACGGGCTGGG GGGTGGTCCTTACGAGATGCAGCCGCTGGCCGAATCGCTGTACGCACAGGGGCTTTCGGTGCTGGCGGTGGCCTATCCCG GCCACGACAAACCCGCCCGCCGCATGCCCGCCTCCACGTGGCCCGAGTGGTACGGCCACATCGAGGCCACCTACCGCAAA CTCGCAGGGGCGTTTGCAAGCATCAGCGTCGTCGGCTTCTCCACCGGCTGCCCGCTTGCTTTGCACCTGGCGGCGCACTG GCCGGTGGCGAAACTGGTGCTGATCAGCCCCTTTGTCTCCGTACGCCACCGCTGGTTCTATCTGCTGCCGCCGGAGGCTT ATCTGTACTCAGTAGGCCGGCTGTTGCCGCAGGTGCCGCGCCGACGTCTGCCGGTGCGCGACCGGGCGATGCGCGAGGCC GCCGAACAAGCCGCCTACTACCGCACCTTCAACCTCTGCGCCGTGCGCAGCGCCCTTGCCCTTGTCGGCACGGTCAAAGC GGAATTGTCCCTGGTGCGCTCTCCGTTACTTATCTTGCAGTCGCGCCGGGACAGCGTCGTGGCCCCCTCGGGGGCCGAGT ATATCTACCGCCGGGTACGCTCTCGCGTCCGGCAATTGCACTGGTTTGACAAATCCGACCATATCCTGCCGCTCGATCTC GAACGCAAAGAGGTCTACGAACGGGTGGGCCGATTTTTGCTTTGA
Upstream 100 bases:
>100_bases GCCTCGGGGGGCGGGGACTAAACCCTCCGCCCGTGCGTTGCGGCACCTCCCGACGCGGGACTATGCTGAGGCGGCGCCCG TTCCAACTCGGCCGCACCGA
Downstream 100 bases:
>100_bases CGGTTGTTCAAAGAGCGTCCCCCGGCATCGCTTCGTGGGATGGCTTTTCGTCATTTACCTACAGCTCGATTGCAGTTGCA GGGGTGGGGCACGTGTCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MHPMLENKPFFLKASAERVCLLLHGLGGGPYEMQPLAESLYAQGLSVLAVAYPGHDKPARRMPASTWPEWYGHIEATYRK LAGAFASISVVGFSTGCPLALHLAAHWPVAKLVLISPFVSVRHRWFYLLPPEAYLYSVGRLLPQVPRRRLPVRDRAMREA AEQAAYYRTFNLCAVRSALALVGTVKAELSLVRSPLLILQSRRDSVVAPSGAEYIYRRVRSRVRQLHWFDKSDHILPLDL ERKEVYERVGRFLL
Sequences:
>Translated_254_residues MHPMLENKPFFLKASAERVCLLLHGLGGGPYEMQPLAESLYAQGLSVLAVAYPGHDKPARRMPASTWPEWYGHIEATYRK LAGAFASISVVGFSTGCPLALHLAAHWPVAKLVLISPFVSVRHRWFYLLPPEAYLYSVGRLLPQVPRRRLPVRDRAMREA AEQAAYYRTFNLCAVRSALALVGTVKAELSLVRSPLLILQSRRDSVVAPSGAEYIYRRVRSRVRQLHWFDKSDHILPLDL ERKEVYERVGRFLL >Mature_254_residues MHPMLENKPFFLKASAERVCLLLHGLGGGPYEMQPLAESLYAQGLSVLAVAYPGHDKPARRMPASTWPEWYGHIEATYRK LAGAFASISVVGFSTGCPLALHLAAHWPVAKLVLISPFVSVRHRWFYLLPPEAYLYSVGRLLPQVPRRRLPVRDRAMREA AEQAAYYRTFNLCAVRSALALVGTVKAELSLVRSPLLILQSRRDSVVAPSGAEYIYRRVRSRVRQLHWFDKSDHILPLDL ERKEVYERVGRFLL
Specific function: Involved in the detoxification of xenobiotics. Shows maximal activity with C6 substrates, with gradually decreasing activity from C8 to C12 substrates. No activity for higher chain length substrates acids rather than long-chain ones [H]
COG id: COG1647
COG function: function code R; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012354 - InterPro: IPR001375 [H]
Pfam domain/function: PF00326 Peptidase_S9 [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 28817; Mature: 28817
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPMLENKPFFLKASAERVCLLLHGLGGGPYEMQPLAESLYAQGLSVLAVAYPGHDKPAR CCCCCCCCCEEEEECHHHEEHEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHH RMPASTWPEWYGHIEATYRKLAGAFASISVVGFSTGCPLALHLAAHWPVAKLVLISPFVS CCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEHHHHCCCHHHHHHHHHHHH VRHRWFYLLPPEAYLYSVGRLLPQVPRRRLPVRDRAMREAAEQAAYYRTFNLCAVRSALA HCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVGTVKAELSLVRSPLLILQSRRDSVVAPSGAEYIYRRVRSRVRQLHWFDKSDHILPLDL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCC ERKEVYERVGRFLL CHHHHHHHHHHHCC >Mature Secondary Structure MHPMLENKPFFLKASAERVCLLLHGLGGGPYEMQPLAESLYAQGLSVLAVAYPGHDKPAR CCCCCCCCCEEEEECHHHEEHEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHH RMPASTWPEWYGHIEATYRKLAGAFASISVVGFSTGCPLALHLAAHWPVAKLVLISPFVS CCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEHHHHCCCHHHHHHHHHHHH VRHRWFYLLPPEAYLYSVGRLLPQVPRRRLPVRDRAMREAAEQAAYYRTFNLCAVRSALA HCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVGTVKAELSLVRSPLLILQSRRDSVVAPSGAEYIYRRVRSRVRQLHWFDKSDHILPLDL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCC ERKEVYERVGRFLL CHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1369099 [H]