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The map label for this gene is omp85 [H]

Identifier: 37521432

GI number: 37521432

Start: 1984099

End: 1986072

Strand: Direct

Name: omp85 [H]

Synonym: glr1863

Alternate gene names: 37521432

Gene position: 1984099-1986072 (Clockwise)

Preceding gene: 37521430

Following gene: 37521433

Centisome position: 42.59

GC content: 64.94

Gene sequence:

>1974_bases
ATGCACCCACTTTTTGGACGTTCTGGTTACGGGCAGACTGCTGCCTCGGTGCTGCTTGTCGCCCAGTTGGGATTCACCCC
GGCGCTTCTAGCCCAGGAGCAGGCGCCGCCGGCTGCCGCCCCGGAGGCTCCTCCCGCCGGTCCGGCACAGCCGGCCGAGA
CGCCGCCCGCCGCTACCCCGGCCGTCCCGGATACGCCGCCTGCCGAACCGCAGCAGGCTCCCACCGAACCGGCCGCCCCT
GCCGAGCCGCAAGTGCTCGTAGCCGAAGTCCGGGTCGTAGCGAGCAAGGGCAAGCTCGGCGACACCCTCGAAGGGCGCGT
CTACAACGCCATCCGCACCCGTCCCGGCCAGACCACCACCCGCACCCAACTGCAGCAGGACATCAACGCCGTCTTTGCCA
CCGGCTACTTCGCCGACGTCAAAGCCACCCCGGAGGACACCCCGCTCGGTGTGCGCGTCACCTTCGACGTGTCCCCCAAC
CCGACTCTGGAGGCGGTGAGCACCGAGGGGAGCACCCTGCTGCCGGAGGCCGTGGTCCAAGAAACGTTCAAAAACCAGGT
GGGCCAGACGCTCAACTTTGGTGAACTGCAGCGCGGCGTCAAATCGCTCGAAGAGTGGTACGCCGAGCGCGGCTATGTGC
TCGCCAAAGTCGCCGACGTGCAATCGACCCCCGACGGCAAAGTCAAGCTCACCGTCACCGAGGGGATCATCGAGGACATC
CGCGTCAAGGGCAACACCCGCACGCGCGACTTTATCGTGACCCGCGAAGTCGCCCTCAAGCCGGGGGGAGTATTCAACCG
CAACGCCATCCAGCGCGACTTGCAGCGGGTCTACGCGCTCAACATTTTCAAGGATGTGGGCCTCGACTTGGGCCAGGGGC
AAGATCCCCAAAAAGTGGTCGTCAATATCAAAGTCGAAGAGAAAAGCACCGGCTCGATCGCCGCGGGTGCGGGCGTCAAC
TCGGCCTACGGCTTTTTTGGCACCCTGTCGCTGCAGGAGAGCAACTTGGGCGGCAACAACCAGAAGATCGGCCTTGATGT
GCAGGGCGGCGGCCAGATTTTGCTGTTCAACTTGAGCTTTACCGACCCGTGGATCGCGGGCGATCCCAACCGCACGTCGC
TTTCGACCAACATCTTCAATCGCCAAGCCTTCAGCTACGTCTTCAACGGCGGCGGCGTCGGCGTGCTCAACCCGCGCACG
GGCTTTGTCGAGACGCCCCGCGAAAATCGCCTCGGCCTGGGTGTCATCTTTGGCAGGCCGCTCAACAACGAATGGCGCGC
CTCGGCGGGGGCACGTTTCGAGACGGTGCAGCTGCGCGACTTTTTGGGGCGGCGCTATACCACCGACAATCTCGGCAACC
CGCTTACCATCAGCGGCACCGACACCGACCGGCTCTTTTTCTTGCAGGGGGCGCTGGTGCGCGACACCCGCGACAACCCG
AACACGCCGCGCTCCGGCTCGGTGTTGCGCGGTTCTTTGGACCAATCGGTGGGAGTGTTGGGGGATGTCTTTTTCACGCG
GCCGACCGTCTCCTACAGCCAGTTCATCCCGATGGACATCCTCCCCTGGGGCCAGGGCAAGCAGGTGCTCGCCTTCAACA
GTTCCGTGGGTACGGTCTTCGGCGCCCTGCCGCCCTACGAAGCCTTTACCCTGGGCGGCGGCAACTCGGTGCGCGGCTTT
TTTGAAGGCAACCTCGGCACCGGCCGCAGCTATATGATCAACTCCGTCGAGTTTCGCGCCCCGGTCTTCGATCCGGTAGG
GGCGGCGCTTTTTGTCGACTACGGCACCACCCTCGGTTCCCAGGCGGCCGTACTTGGGGCTCCGGCCATCGTGCGCGGCA
AAATCGGTGCGGGCCTGGGCTTCGGCATCGGCCTGCGCGTCCAGTCGCCCCTCGGTCCCCTGCGCATCGACTTTGCCGCC
AACACCGCCGGGCTACCCAGCCAGGTGCACTTTGGCCTTGGAGAAAAGTTTTAG

Upstream 100 bases:

>100_bases
GGTAAGCGGCGGCAATCACGGTAAACTAAATTGACCCATCCGAGACCACCGGTCTTCGCGGATCGAGCCGCCCACTTCGC
AATTTACAGGCTTTGCGCTC

Downstream 100 bases:

>100_bases
ATGGGAGTCCAATTCAGCGCTGCTGAATTGACCGACCTGGTCGGCGGCGAGCTGTCGGGCGATCCCGGGCGGCTGGTCGT
GGGTGCCCGGCCTCCGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 657

Protein sequence:

>657_residues
MHPLFGRSGYGQTAASVLLVAQLGFTPALLAQEQAPPAAAPEAPPAGPAQPAETPPAATPAVPDTPPAEPQQAPTEPAAP
AEPQVLVAEVRVVASKGKLGDTLEGRVYNAIRTRPGQTTTRTQLQQDINAVFATGYFADVKATPEDTPLGVRVTFDVSPN
PTLEAVSTEGSTLLPEAVVQETFKNQVGQTLNFGELQRGVKSLEEWYAERGYVLAKVADVQSTPDGKVKLTVTEGIIEDI
RVKGNTRTRDFIVTREVALKPGGVFNRNAIQRDLQRVYALNIFKDVGLDLGQGQDPQKVVVNIKVEEKSTGSIAAGAGVN
SAYGFFGTLSLQESNLGGNNQKIGLDVQGGGQILLFNLSFTDPWIAGDPNRTSLSTNIFNRQAFSYVFNGGGVGVLNPRT
GFVETPRENRLGLGVIFGRPLNNEWRASAGARFETVQLRDFLGRRYTTDNLGNPLTISGTDTDRLFFLQGALVRDTRDNP
NTPRSGSVLRGSLDQSVGVLGDVFFTRPTVSYSQFIPMDILPWGQGKQVLAFNSSVGTVFGALPPYEAFTLGGGNSVRGF
FEGNLGTGRSYMINSVEFRAPVFDPVGAALFVDYGTTLGSQAAVLGAPAIVRGKIGAGLGFGIGLRVQSPLGPLRIDFAA
NTAGLPSQVHFGLGEKF

Sequences:

>Translated_657_residues
MHPLFGRSGYGQTAASVLLVAQLGFTPALLAQEQAPPAAAPEAPPAGPAQPAETPPAATPAVPDTPPAEPQQAPTEPAAP
AEPQVLVAEVRVVASKGKLGDTLEGRVYNAIRTRPGQTTTRTQLQQDINAVFATGYFADVKATPEDTPLGVRVTFDVSPN
PTLEAVSTEGSTLLPEAVVQETFKNQVGQTLNFGELQRGVKSLEEWYAERGYVLAKVADVQSTPDGKVKLTVTEGIIEDI
RVKGNTRTRDFIVTREVALKPGGVFNRNAIQRDLQRVYALNIFKDVGLDLGQGQDPQKVVVNIKVEEKSTGSIAAGAGVN
SAYGFFGTLSLQESNLGGNNQKIGLDVQGGGQILLFNLSFTDPWIAGDPNRTSLSTNIFNRQAFSYVFNGGGVGVLNPRT
GFVETPRENRLGLGVIFGRPLNNEWRASAGARFETVQLRDFLGRRYTTDNLGNPLTISGTDTDRLFFLQGALVRDTRDNP
NTPRSGSVLRGSLDQSVGVLGDVFFTRPTVSYSQFIPMDILPWGQGKQVLAFNSSVGTVFGALPPYEAFTLGGGNSVRGF
FEGNLGTGRSYMINSVEFRAPVFDPVGAALFVDYGTTLGSQAAVLGAPAIVRGKIGAGLGFGIGLRVQSPLGPLRIDFAA
NTAGLPSQVHFGLGEKF
>Mature_657_residues
MHPLFGRSGYGQTAASVLLVAQLGFTPALLAQEQAPPAAAPEAPPAGPAQPAETPPAATPAVPDTPPAEPQQAPTEPAAP
AEPQVLVAEVRVVASKGKLGDTLEGRVYNAIRTRPGQTTTRTQLQQDINAVFATGYFADVKATPEDTPLGVRVTFDVSPN
PTLEAVSTEGSTLLPEAVVQETFKNQVGQTLNFGELQRGVKSLEEWYAERGYVLAKVADVQSTPDGKVKLTVTEGIIEDI
RVKGNTRTRDFIVTREVALKPGGVFNRNAIQRDLQRVYALNIFKDVGLDLGQGQDPQKVVVNIKVEEKSTGSIAAGAGVN
SAYGFFGTLSLQESNLGGNNQKIGLDVQGGGQILLFNLSFTDPWIAGDPNRTSLSTNIFNRQAFSYVFNGGGVGVLNPRT
GFVETPRENRLGLGVIFGRPLNNEWRASAGARFETVQLRDFLGRRYTTDNLGNPLTISGTDTDRLFFLQGALVRDTRDNP
NTPRSGSVLRGSLDQSVGVLGDVFFTRPTVSYSQFIPMDILPWGQGKQVLAFNSSVGTVFGALPPYEAFTLGGGNSVRGF
FEGNLGTGRSYMINSVEFRAPVFDPVGAALFVDYGTTLGSQAAVLGAPAIVRGKIGAGLGFGIGLRVQSPLGPLRIDFAA
NTAGLPSQVHFGLGEKF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

None

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 69794; Mature: 69794

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPLFGRSGYGQTAASVLLVAQLGFTPALLAQEQAPPAAAPEAPPAGPAQPAETPPAATP
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AVPDTPPAEPQQAPTEPAAPAEPQVLVAEVRVVASKGKLGDTLEGRVYNAIRTRPGQTTT
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEHHHHCCCCCCHH
RTQLQQDINAVFATGYFADVKATPEDTPLGVRVTFDVSPNPTLEAVSTEGSTLLPEAVVQ
HHHHHHHHHHEEEECEEEEEECCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCHHHHHH
ETFKNQVGQTLNFGELQRGVKSLEEWYAERGYVLAKVADVQSTPDGKVKLTVTEGIIEDI
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEEEECCCHHHE
RVKGNTRTRDFIVTREVALKPGGVFNRNAIQRDLQRVYALNIFKDVGLDLGQGQDPQKVV
EECCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
VNIKVEEKSTGSIAAGAGVNSAYGFFGTLSLQESNLGGNNQKIGLDVQGGGQILLFNLSF
EEEEEECCCCCCEEECCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCEEEEEEEEC
TDPWIAGDPNRTSLSTNIFNRQAFSYVFNGGGVGVLNPRTGFVETPRENRLGLGVIFGRP
CCCEECCCCCCCEEEHHHHHHHEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEECCC
LNNEWRASAGARFETVQLRDFLGRRYTTDNLGNPLTISGTDTDRLFFLQGALVRDTRDNP
CCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECEEEECCCCCC
NTPRSGSVLRGSLDQSVGVLGDVFFTRPTVSYSQFIPMDILPWGQGKQVLAFNSSVGTVF
CCCCCCCEEECCHHHHHHHHHHHHHCCCCCCHHHCCCCEEECCCCCCEEEEECCCCCHHC
GALPPYEAFTLGGGNSVRGFFEGNLGTGRSYMINSVEFRAPVFDPVGAALFVDYGTTLGS
CCCCCCCEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCC
QAAVLGAPAIVRGKIGAGLGFGIGLRVQSPLGPLRIDFAANTAGLPSQVHFGLGEKF
CEEECCCCEEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MHPLFGRSGYGQTAASVLLVAQLGFTPALLAQEQAPPAAAPEAPPAGPAQPAETPPAATP
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AVPDTPPAEPQQAPTEPAAPAEPQVLVAEVRVVASKGKLGDTLEGRVYNAIRTRPGQTTT
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEHHHHCCCCCCHH
RTQLQQDINAVFATGYFADVKATPEDTPLGVRVTFDVSPNPTLEAVSTEGSTLLPEAVVQ
HHHHHHHHHHEEEECEEEEEECCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCHHHHHH
ETFKNQVGQTLNFGELQRGVKSLEEWYAERGYVLAKVADVQSTPDGKVKLTVTEGIIEDI
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEEEECCCHHHE
RVKGNTRTRDFIVTREVALKPGGVFNRNAIQRDLQRVYALNIFKDVGLDLGQGQDPQKVV
EECCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
VNIKVEEKSTGSIAAGAGVNSAYGFFGTLSLQESNLGGNNQKIGLDVQGGGQILLFNLSF
EEEEEECCCCCCEEECCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCEEEEEEEEC
TDPWIAGDPNRTSLSTNIFNRQAFSYVFNGGGVGVLNPRTGFVETPRENRLGLGVIFGRP
CCCEECCCCCCCEEEHHHHHHHEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEECCC
LNNEWRASAGARFETVQLRDFLGRRYTTDNLGNPLTISGTDTDRLFFLQGALVRDTRDNP
CCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECEEEECCCCCC
NTPRSGSVLRGSLDQSVGVLGDVFFTRPTVSYSQFIPMDILPWGQGKQVLAFNSSVGTVF
CCCCCCCEEECCHHHHHHHHHHHHHCCCCCCHHHCCCCEEECCCCCCEEEEECCCCCHHC
GALPPYEAFTLGGGNSVRGFFEGNLGTGRSYMINSVEFRAPVFDPVGAALFVDYGTTLGS
CCCCCCCEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCC
QAAVLGAPAIVRGKIGAGLGFGIGLRVQSPLGPLRIDFAANTAGLPSQVHFGLGEKF
CEEECCCCEEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]