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The map label for this gene is yfgC [H]

Identifier: 37521194

GI number: 37521194

Start: 1739622

End: 1740815

Strand: Reverse

Name: yfgC [H]

Synonym: gll1625

Alternate gene names: 37521194

Gene position: 1740815-1739622 (Counterclockwise)

Preceding gene: 37521196

Following gene: 37521190

Centisome position: 37.36

GC content: 62.98

Gene sequence:

>1194_bases
GTGAATGTAGTCTGTCAAGGGTTCCAGCCATTTGCAATTAATGCTGGCTCAGCTGCAATATTGCAGGTCGAGGTACAGTC
ATTGTTGGCTTGGTTGCATTTAATCCTGGCTCACTTTGCCCTTATTGCAGGTCGGAGCCTCTACTATTGCTGGTCGCTAC
ACCTACGGTATCGTCGCTCTCGCTGTGCACCGCACGCCGGGTGCGTCCCCGGGATGATGGCGCACGAGCGGGTGAACTTG
TATCGTGACATCGGCGGCTTCGCAGGGGTACCCGTTCCTCGTCGCTGCCGATTGCAGATAGGTAGGATCGACCACGTTTT
CAATCGAATCGGTGCACCCACTTTTCACACCATCCAATTCGTTACATCCATGGGCAGATCTTCCGGCGGCGGTTTCTTTC
GCGTGCTCATCGCACTGGTTTTGGCCGGTGGCGCGTTGTTTACTTACTTCAGTTCTACCCAGGTCAACCCGGTCACCGGC
GAGAAGCAAAACATCACGATTACCCCCGAGCAGGAGATCGCCCTCGGATTGCAGGCGTTGCCGCAACTGCAGCGGCAGTA
CGGCGGCACCTCGCGCGACGCTCGGGGCCAGCAACTGGTCGATCGCGTCGGCGAGCGGCTCGTGCGCGGGACTGCGGCAA
GCCGCAGCCCCTACCGCTTCAAATTTCACCTGCTCGACGACCCGCGCACGGTGAACGCCTTTGCCCTGCCCGGGGGCCAG
ATCTTTATCACCAGCGCGCTGCTGGGCCGCCTCAAAAGCGAAGGCGAACTGGCGGGCGTCCTCGCCCACGAGATTGGGCA
CGTGGTGGGCCGCCACGGCGCCGAGCAACTGGCCAAGCAGCAGTTGACCCAGGGCCTCACCGGGGCGGCGGTGATCGCCA
CCTACGACCCCTACGACCCCTCCAGCCGCAACAGCGCCGCGGTAGCCGCCGCCCTCGGGCAACTGGTCAACATGCGCTTC
GGCCGCGAGGACGAACTGGAGTCAGACCGGCTCGCCATTACCTACATGGCCGAGGCGGGCTACGATCCGCGCTCGCTGCT
TGCGGTGATGCGCACGCTGAAGGCGGCCGGGGGAGGTGCCCGCCCGCCCGAATTTTTCAGCACCCACCCCGACCCGGATA
GACGTCTGGAGCGTATCGCCGAGGCGATCAAGCAGCAGTACCCGAACGGCGTGCCAGCGGGCCTCAAACCCTAG

Upstream 100 bases:

>100_bases
ACGAAGGCTCGACCTTTCAGCAGTCAACAGAGCCGATCATAGGATTCGAAGCCAGGTTTTGTCATCTCCTGATGGGTCTC
TTACCTTTTTCTCTACCAAC

Downstream 100 bases:

>100_bases
AGCGCCACCTGCCAGATACCGCGGCCGTAGGTCGAGACGCGCAGGAAGCTGCCGTCCGCGGGCAGGTACAGATCGCTCAC
CTGCACCGCGGGCAGTCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MNVVCQGFQPFAINAGSAAILQVEVQSLLAWLHLILAHFALIAGRSLYYCWSLHLRYRRSRCAPHAGCVPGMMAHERVNL
YRDIGGFAGVPVPRRCRLQIGRIDHVFNRIGAPTFHTIQFVTSMGRSSGGGFFRVLIALVLAGGALFTYFSSTQVNPVTG
EKQNITITPEQEIALGLQALPQLQRQYGGTSRDARGQQLVDRVGERLVRGTAASRSPYRFKFHLLDDPRTVNAFALPGGQ
IFITSALLGRLKSEGELAGVLAHEIGHVVGRHGAEQLAKQQLTQGLTGAAVIATYDPYDPSSRNSAAVAAALGQLVNMRF
GREDELESDRLAITYMAEAGYDPRSLLAVMRTLKAAGGGARPPEFFSTHPDPDRRLERIAEAIKQQYPNGVPAGLKP

Sequences:

>Translated_397_residues
MNVVCQGFQPFAINAGSAAILQVEVQSLLAWLHLILAHFALIAGRSLYYCWSLHLRYRRSRCAPHAGCVPGMMAHERVNL
YRDIGGFAGVPVPRRCRLQIGRIDHVFNRIGAPTFHTIQFVTSMGRSSGGGFFRVLIALVLAGGALFTYFSSTQVNPVTG
EKQNITITPEQEIALGLQALPQLQRQYGGTSRDARGQQLVDRVGERLVRGTAASRSPYRFKFHLLDDPRTVNAFALPGGQ
IFITSALLGRLKSEGELAGVLAHEIGHVVGRHGAEQLAKQQLTQGLTGAAVIATYDPYDPSSRNSAAVAAALGQLVNMRF
GREDELESDRLAITYMAEAGYDPRSLLAVMRTLKAAGGGARPPEFFSTHPDPDRRLERIAEAIKQQYPNGVPAGLKP
>Mature_397_residues
MNVVCQGFQPFAINAGSAAILQVEVQSLLAWLHLILAHFALIAGRSLYYCWSLHLRYRRSRCAPHAGCVPGMMAHERVNL
YRDIGGFAGVPVPRRCRLQIGRIDHVFNRIGAPTFHTIQFVTSMGRSSGGGFFRVLIALVLAGGALFTYFSSTQVNPVTG
EKQNITITPEQEIALGLQALPQLQRQYGGTSRDARGQQLVDRVGERLVRGTAASRSPYRFKFHLLDDPRTVNAFALPGGQ
IFITSALLGRLKSEGELAGVLAHEIGHVVGRHGAEQLAKQQLTQGLTGAAVIATYDPYDPSSRNSAAVAAALGQLVNMRF
GREDELESDRLAITYMAEAGYDPRSLLAVMRTLKAAGGGARPPEFFSTHPDPDRRLERIAEAIKQQYPNGVPAGLKP

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=261, Percent_Identity=26.0536398467433, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI1788840, Length=264, Percent_Identity=31.0606060606061, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI87081800, Length=192, Percent_Identity=26.0416666666667, Blast_Score=66, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6322940, Length=272, Percent_Identity=26.4705882352941, Blast_Score=89, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 43208; Mature: 43208

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVVCQGFQPFAINAGSAAILQVEVQSLLAWLHLILAHFALIAGRSLYYCWSLHLRYRRS
CCEEECCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHH
RCAPHAGCVPGMMAHERVNLYRDIGGFAGVPVPRRCRLQIGRIDHVFNRIGAPTFHTIQF
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
VTSMGRSSGGGFFRVLIALVLAGGALFTYFSSTQVNPVTGEKQNITITPEQEIALGLQAL
HHHHCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHH
PQLQRQYGGTSRDARGQQLVDRVGERLVRGTAASRSPYRFKFHLLDDPRTVNAFALPGGQ
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCCH
IFITSALLGRLKSEGELAGVLAHEIGHVVGRHGAEQLAKQQLTQGLTGAAVIATYDPYDP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCC
SSRNSAAVAAALGQLVNMRFGREDELESDRLAITYMAEAGYDPRSLLAVMRTLKAAGGGA
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCC
RPPEFFSTHPDPDRRLERIAEAIKQQYPNGVPAGLKP
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNVVCQGFQPFAINAGSAAILQVEVQSLLAWLHLILAHFALIAGRSLYYCWSLHLRYRRS
CCEEECCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHH
RCAPHAGCVPGMMAHERVNLYRDIGGFAGVPVPRRCRLQIGRIDHVFNRIGAPTFHTIQF
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
VTSMGRSSGGGFFRVLIALVLAGGALFTYFSSTQVNPVTGEKQNITITPEQEIALGLQAL
HHHHCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHH
PQLQRQYGGTSRDARGQQLVDRVGERLVRGTAASRSPYRFKFHLLDDPRTVNAFALPGGQ
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCCH
IFITSALLGRLKSEGELAGVLAHEIGHVVGRHGAEQLAKQQLTQGLTGAAVIATYDPYDP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCC
SSRNSAAVAAALGQLVNMRFGREDELESDRLAITYMAEAGYDPRSLLAVMRTLKAAGGGA
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCC
RPPEFFSTHPDPDRRLERIAEAIKQQYPNGVPAGLKP
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]