| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is tal
Identifier: 37521166
GI number: 37521166
Start: 1713857
End: 1715026
Strand: Reverse
Name: tal
Synonym: gll1597
Alternate gene names: 37521166
Gene position: 1715026-1713857 (Counterclockwise)
Preceding gene: 37521167
Following gene: 37521165
Centisome position: 36.81
GC content: 62.39
Gene sequence:
>1170_bases ATGACCGGAAGCCTACTTGACCAACTGCGGCAGATGACCATCGTCGTCGCCGACACCGGCGACATCCAGGCCATTGAGCA GTTCACACCGCGCGACGCCACCACCAATCCTTCGCTGATCACCGCCGCCGCCCAGATGCCGCAGTATCAGCAAATCGTAG ACGACACCCTCAAGCAGGCGCGCGCGGAGCTGGGTCCCGAGGCGAAGGCCGCGGCGGTCGCCACCCTCGCCTTCGACCGG CTGGCGGTGGCCTTTGGCCTCAAGATCCTGGCCATCGTCCCCGGGCGGGTCTCGACCGAAGTCGACGCGCGCCTGTCCTA CGACACCGAGGCGACGATCGAAAAGGGGCGCTCACTGATCGCCCAGTACGAAGCGGCGGGCATTTCCCGCGAGCGGGTGC TCATCAAGATCGCTTCGACCTGGGAGGGTATCCGCGCCGCCGAAATTCTTGAGGACGAAGGCATCCACTGCAACCTGACG TTGCTGTTCGGTGTGCACCAGGCGATCGCCTGCGCCGAGGCGGGGGTGACCCTCATCTCACCTTTCGTCGGTCGCATCCT CGACTGGTACAAAAAAGAAACCGGCCGCGATTACGAGCCCCACGAAGATCCGGGCGTGGTCTCGGTGACGACCATTTACA ACTACTACAAAAAGTTCGGCTACCAAACCCAGGTGATGGGGGCGAGCTTCCGCAACATCGGCGAAATCGTCGAACTGGCC GGCTGCGATTTGCTCACGATCTCTCCAAAGCTTCTCGAACAACTGCAGGCGACCGACGCAGAACTCGTCCGCAAGCTGGA TCCGGACCAAGCCGCTGGCCTGGAGATCGAAAAGATCGACATGGACCAGGCGACCTTCGAGAAGAGGCACGCCGAAGACC GCATGGCTTCTGAGAAGCTCGACGAGGGCATCAAGGGCTTCACCAACGCCCTGGTGGCCCTGGAGAAGCTGCTCGCCGAC CGTCTGGCGCGGCTGGAGGGTGAAGTGGCCCTCAACCAGGCCTTCGAAAGCATCTTCCGCACTTTTGATCTCGACGGCGA CGGGTTTATCACCCGCGAGGAGTGGATGGGCACCGACGCGGTTTTTGATGCCATCGACCTCAACCATGACGGCAAGATCA CAGCGGAGGAATTGGGGGCCGGGATCGGGGCCGTCTCGAAACTGGCGTAG
Upstream 100 bases:
>100_bases GGAGGGGGGCTGGTATTTTGTTAGGGCTGTCCTCCGGCAAGAGTCTTGGTCCAGGGAAAGCTTGAGTTCAGAGCAAACCC TTAAATTGAAGGAGACGGGC
Downstream 100 bases:
>100_bases GTGATGTCTCCAAAGCAGTCCGACTGTGATAGCCACCACGGAGCGAGGGTCTTTCCATGGCTCACCTCATCCTTATCCGG CACGGCCAGAGTCTTTGGAA
Product: transaldolase/EF-hand domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MTGSLLDQLRQMTIVVADTGDIQAIEQFTPRDATTNPSLITAAAQMPQYQQIVDDTLKQARAELGPEAKAAAVATLAFDR LAVAFGLKILAIVPGRVSTEVDARLSYDTEATIEKGRSLIAQYEAAGISRERVLIKIASTWEGIRAAEILEDEGIHCNLT LLFGVHQAIACAEAGVTLISPFVGRILDWYKKETGRDYEPHEDPGVVSVTTIYNYYKKFGYQTQVMGASFRNIGEIVELA GCDLLTISPKLLEQLQATDAELVRKLDPDQAAGLEIEKIDMDQATFEKRHAEDRMASEKLDEGIKGFTNALVALEKLLAD RLARLEGEVALNQAFESIFRTFDLDGDGFITREEWMGTDAVFDAIDLNHDGKITAEELGAGIGAVSKLA
Sequences:
>Translated_389_residues MTGSLLDQLRQMTIVVADTGDIQAIEQFTPRDATTNPSLITAAAQMPQYQQIVDDTLKQARAELGPEAKAAAVATLAFDR LAVAFGLKILAIVPGRVSTEVDARLSYDTEATIEKGRSLIAQYEAAGISRERVLIKIASTWEGIRAAEILEDEGIHCNLT LLFGVHQAIACAEAGVTLISPFVGRILDWYKKETGRDYEPHEDPGVVSVTTIYNYYKKFGYQTQVMGASFRNIGEIVELA GCDLLTISPKLLEQLQATDAELVRKLDPDQAAGLEIEKIDMDQATFEKRHAEDRMASEKLDEGIKGFTNALVALEKLLAD RLARLEGEVALNQAFESIFRTFDLDGDGFITREEWMGTDAVFDAIDLNHDGKITAEELGAGIGAVSKLA >Mature_388_residues TGSLLDQLRQMTIVVADTGDIQAIEQFTPRDATTNPSLITAAAQMPQYQQIVDDTLKQARAELGPEAKAAAVATLAFDRL AVAFGLKILAIVPGRVSTEVDARLSYDTEATIEKGRSLIAQYEAAGISRERVLIKIASTWEGIRAAEILEDEGIHCNLTL LFGVHQAIACAEAGVTLISPFVGRILDWYKKETGRDYEPHEDPGVVSVTTIYNYYKKFGYQTQVMGASFRNIGEIVELAG CDLLTISPKLLEQLQATDAELVRKLDPDQAAGLEIEKIDMDQATFEKRHAEDRMASEKLDEGIKGFTNALVALEKLLADR LARLEGEVALNQAFESIFRTFDLDGDGFITREEWMGTDAVFDAIDLNHDGKITAEELGAGIGAVSKLA
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 EF-hand domains
Homologues:
Organism=Homo sapiens, GI5803187, Length=326, Percent_Identity=57.0552147239264, Blast_Score=365, Evalue=1e-101, Organism=Escherichia coli, GI1786189, Length=318, Percent_Identity=57.2327044025157, Blast_Score=349, Evalue=2e-97, Organism=Escherichia coli, GI1788807, Length=318, Percent_Identity=54.0880503144654, Blast_Score=320, Evalue=1e-88, Organism=Caenorhabditis elegans, GI25153750, Length=321, Percent_Identity=55.1401869158878, Blast_Score=346, Evalue=1e-95, Organism=Caenorhabditis elegans, GI25153752, Length=165, Percent_Identity=53.9393939393939, Blast_Score=174, Evalue=8e-44, Organism=Caenorhabditis elegans, GI17570473, Length=93, Percent_Identity=46.2365591397849, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323386, Length=324, Percent_Identity=56.4814814814815, Blast_Score=308, Evalue=7e-85, Organism=Saccharomyces cerevisiae, GI6321480, Length=323, Percent_Identity=49.5356037151703, Blast_Score=308, Evalue=1e-84, Organism=Drosophila melanogaster, GI45549185, Length=321, Percent_Identity=56.0747663551402, Blast_Score=358, Evalue=3e-99,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): TAL_GLOVI (Q7NK81)
Other databases:
- EMBL: BA000045 - RefSeq: NP_924543.1 - ProteinModelPortal: Q7NK81 - SMR: Q7NK81 - GeneID: 2598563 - GenomeReviews: BA000045_GR - KEGG: gvi:gll1597 - NMPDR: fig|251221.1.peg.1597 - HOGENOM: HBG286747 - OMA: EKERINC - ProtClustDB: PRK12309 - BioCyc: GVIO251221:GLL1597-MONOMER - BRENDA: 2.2.1.2 - GO: GO:0005737 - HAMAP: MF_00492 - InterPro: IPR013785 - InterPro: IPR011992 - InterPro: IPR018247 - InterPro: IPR018249 - InterPro: IPR002048 - InterPro: IPR001585 - InterPro: IPR004730 - InterPro: IPR018225 - Gene3D: G3DSA:3.20.20.70 - Gene3D: G3DSA:1.10.238.10 - PANTHER: PTHR10683 - PANTHER: PTHR10683:SF3 - SMART: SM00054 - TIGRFAMs: TIGR00874
Pfam domain/function: PF00923 Transaldolase
EC number: =2.2.1.2
Molecular weight: Translated: 42514; Mature: 42383
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS00018 EF_HAND_1; PS50222 EF_HAND_2; PS01054 TRANSALDOLASE_1; PS00958 TRANSALDOLASE_2
Important sites: ACT_SITE 136-136
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSLLDQLRQMTIVVADTGDIQAIEQFTPRDATTNPSLITAAAQMPQYQQIVDDTLKQA CCCHHHHHHHHEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH RAELGPEAKAAAVATLAFDRLAVAFGLKILAIVPGRVSTEVDARLSYDTEATIEKGRSLI HHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHCEECCCCHHHHHHHHHHH AQYEAAGISRERVLIKIASTWEGIRAAEILEDEGIHCNLTLLFGVHQAIACAEAGVTLIS HHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCHHHHH PFVGRILDWYKKETGRDYEPHEDPGVVSVTTIYNYYKKFGYQTQVMGASFRNIGEIVELA HHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH GCDLLTISPKLLEQLQATDAELVRKLDPDQAAGLEIEKIDMDQATFEKRHAEDRMASEKL CCCEEEECHHHHHHHHHHHHHHHHHCCCCHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH DEGIKGFTNALVALEKLLADRLARLEGEVALNQAFESIFRTFDLDGDGFITREEWMGTDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHCCCHH VFDAIDLNHDGKITAEELGAGIGAVSKLA HHHHHCCCCCCCEEHHHHCCCCCHHHHCC >Mature Secondary Structure TGSLLDQLRQMTIVVADTGDIQAIEQFTPRDATTNPSLITAAAQMPQYQQIVDDTLKQA CCHHHHHHHHEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH RAELGPEAKAAAVATLAFDRLAVAFGLKILAIVPGRVSTEVDARLSYDTEATIEKGRSLI HHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHCEECCCCHHHHHHHHHHH AQYEAAGISRERVLIKIASTWEGIRAAEILEDEGIHCNLTLLFGVHQAIACAEAGVTLIS HHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCHHHHH PFVGRILDWYKKETGRDYEPHEDPGVVSVTTIYNYYKKFGYQTQVMGASFRNIGEIVELA HHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH GCDLLTISPKLLEQLQATDAELVRKLDPDQAAGLEIEKIDMDQATFEKRHAEDRMASEKL CCCEEEECHHHHHHHHHHHHHHHHHCCCCHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH DEGIKGFTNALVALEKLLADRLARLEGEVALNQAFESIFRTFDLDGDGFITREEWMGTDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHCCCHH VFDAIDLNHDGKITAEELGAGIGAVSKLA HHHHHCCCCCCCEEHHHHCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14621292