| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is ydfG [C]
Identifier: 37521150
GI number: 37521150
Start: 1699746
End: 1700402
Strand: Reverse
Name: ydfG [C]
Synonym: gll1581
Alternate gene names: 37521150
Gene position: 1700402-1699746 (Counterclockwise)
Preceding gene: 37521151
Following gene: 37521149
Centisome position: 36.5
GC content: 67.28
Gene sequence:
>657_bases GTGGCGAGGCGTCTGGCGGAGCAGGGCTTCGGGGTGGCGTTGGTGGCCCGCAGCCGCGAGCGCCTGGAGCAGTTGCAATC GGAACTGGCCCCGGCCAAAACGGTTGCCCTGGCGCAAGATCTCACCGATTTTGGGGCCGCGGACGGTGTGGTGGCTGCCG TCCAGACCAAGCTCGGTCCTATCGACGTGCTCGTCAACAGTGCCGGAATGGCCTACACCAATACGCTTGAGGGCACGCCG GTTGCGGATTGGGAGCGCGTTCTGGCTCTCAACCTGACCGCACCCTTTGCAATGACCCGCGCTGTATTGCCCGGTATGCG CGCGCGGCGGAGCGGTCTGGTGGTGAACCTTGTCTCCATCGCGGGCGAGCGCGCCTTTGCGGGCTGGGGAGCTTACTGCG CCAGCAAAGCCGGCCTGCTCGCCATGACGCGCGTGCTCGCCGAGGAGGTCCGCTCCGAGGGCATCCGGGTGACGGCCCTC TGCCCGGGGGCGGTGGATACGGCCCTCTGGGACAGCGAAGCGGTCGCGGCCGACTTCGAGCGCGGGGCGATGCTTTCGGC TGAGACCGTCGCGGGGTTGGTGCTCTACACGGTGAATCTTCCTCCCGACGCTGTGCTCGAAGCAGCGATTTTGATGCCCG GCCGGGGCACTTTCTAA
Upstream 100 bases:
>100_bases CGCTTTTATCTGCCTGAGAGCCGCCTTGGAATCAGCGCAAACTGACAGGATACGGGGGGTAGCCCTCATCACCGGAGCAA GCAGTGGCATCGGTCGCGCT
Downstream 100 bases:
>100_bases ATCATTTACAAGGAAACCGAAACATGACGATTGCCCACAAGGATTTTCTGCCTTCCGACTGGCACGAAGACGACTCCGCT TCAGAAGCCGCAAGCCGCAA
Product: short chain dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MARRLAEQGFGVALVARSRERLEQLQSELAPAKTVALAQDLTDFGAADGVVAAVQTKLGPIDVLVNSAGMAYTNTLEGTP VADWERVLALNLTAPFAMTRAVLPGMRARRSGLVVNLVSIAGERAFAGWGAYCASKAGLLAMTRVLAEEVRSEGIRVTAL CPGAVDTALWDSEAVAADFERGAMLSAETVAGLVLYTVNLPPDAVLEAAILMPGRGTF
Sequences:
>Translated_218_residues MARRLAEQGFGVALVARSRERLEQLQSELAPAKTVALAQDLTDFGAADGVVAAVQTKLGPIDVLVNSAGMAYTNTLEGTP VADWERVLALNLTAPFAMTRAVLPGMRARRSGLVVNLVSIAGERAFAGWGAYCASKAGLLAMTRVLAEEVRSEGIRVTAL CPGAVDTALWDSEAVAADFERGAMLSAETVAGLVLYTVNLPPDAVLEAAILMPGRGTF >Mature_217_residues ARRLAEQGFGVALVARSRERLEQLQSELAPAKTVALAQDLTDFGAADGVVAAVQTKLGPIDVLVNSAGMAYTNTLEGTPV ADWERVLALNLTAPFAMTRAVLPGMRARRSGLVVNLVSIAGERAFAGWGAYCASKAGLLAMTRVLAEEVRSEGIRVTALC PGAVDTALWDSEAVAADFERGAMLSAETVAGLVLYTVNLPPDAVLEAAILMPGRGTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI4503817, Length=168, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=7e-20, Organism=Homo sapiens, GI20149619, Length=192, Percent_Identity=33.8541666666667, Blast_Score=91, Evalue=6e-19, Organism=Homo sapiens, GI109715829, Length=217, Percent_Identity=28.110599078341, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI7705855, Length=174, Percent_Identity=31.6091954022989, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI7706318, Length=176, Percent_Identity=30.6818181818182, Blast_Score=81, Evalue=7e-16, Organism=Homo sapiens, GI31542939, Length=153, Percent_Identity=31.3725490196078, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI66933014, Length=149, Percent_Identity=30.8724832214765, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI5031737, Length=216, Percent_Identity=29.6296296296296, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI32483357, Length=184, Percent_Identity=34.2391304347826, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI142976729, Length=119, Percent_Identity=32.7731092436975, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI25282469, Length=161, Percent_Identity=29.8136645962733, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI40254992, Length=169, Percent_Identity=29.585798816568, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI33667109, Length=198, Percent_Identity=30.8080808080808, Blast_Score=74, Evalue=7e-14, Organism=Homo sapiens, GI4557649, Length=172, Percent_Identity=29.6511627906977, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI226371731, Length=174, Percent_Identity=29.3103448275862, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI126723750, Length=178, Percent_Identity=33.1460674157303, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI19923817, Length=193, Percent_Identity=26.4248704663212, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI7657478, Length=136, Percent_Identity=33.8235294117647, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI126723191, Length=166, Percent_Identity=33.1325301204819, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI7705925, Length=166, Percent_Identity=30.7228915662651, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI4758504, Length=150, Percent_Identity=32.6666666666667, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI15277342, Length=140, Percent_Identity=32.1428571428571, Blast_Score=64, Evalue=8e-11, Organism=Escherichia coli, GI1787820, Length=222, Percent_Identity=30.1801801801802, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787335, Length=186, Percent_Identity=30.6451612903226, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI87082100, Length=183, Percent_Identity=32.7868852459016, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1790717, Length=165, Percent_Identity=32.7272727272727, Blast_Score=80, Evalue=8e-17, Organism=Escherichia coli, GI87082160, Length=125, Percent_Identity=29.6, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1789208, Length=145, Percent_Identity=29.6551724137931, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1786812, Length=117, Percent_Identity=29.9145299145299, Blast_Score=61, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17560150, Length=177, Percent_Identity=31.638418079096, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17562904, Length=179, Percent_Identity=33.5195530726257, Blast_Score=84, Evalue=4e-17, Organism=Caenorhabditis elegans, GI193203117, Length=156, Percent_Identity=30.1282051282051, Blast_Score=82, Evalue=1e-16, Organism=Caenorhabditis elegans, GI193203115, Length=156, Percent_Identity=30.1282051282051, Blast_Score=82, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71994600, Length=177, Percent_Identity=30.5084745762712, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17564282, Length=175, Percent_Identity=27.4285714285714, Blast_Score=80, Evalue=6e-16, Organism=Caenorhabditis elegans, GI71994604, Length=198, Percent_Identity=30.8080808080808, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562906, Length=187, Percent_Identity=29.9465240641711, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI212646214, Length=177, Percent_Identity=31.638418079096, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17560332, Length=178, Percent_Identity=31.4606741573034, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17559104, Length=175, Percent_Identity=29.1428571428571, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17538480, Length=178, Percent_Identity=29.2134831460674, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI25152911, Length=180, Percent_Identity=28.8888888888889, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17561402, Length=183, Percent_Identity=28.4153005464481, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17560176, Length=179, Percent_Identity=27.9329608938547, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17551412, Length=177, Percent_Identity=30.5084745762712, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17508895, Length=184, Percent_Identity=25, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25147288, Length=169, Percent_Identity=27.810650887574, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17562908, Length=179, Percent_Identity=29.0502793296089, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17562990, Length=173, Percent_Identity=30.0578034682081, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17557668, Length=177, Percent_Identity=28.2485875706215, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17563726, Length=177, Percent_Identity=28.2485875706215, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI72000259, Length=191, Percent_Identity=29.3193717277487, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193204405, Length=180, Percent_Identity=30.5555555555556, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17562910, Length=173, Percent_Identity=26.5895953757225, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17538182, Length=133, Percent_Identity=33.0827067669173, Blast_Score=64, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=211, Percent_Identity=31.7535545023697, Blast_Score=93, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6322227, Length=163, Percent_Identity=29.4478527607362, Blast_Score=72, Evalue=8e-14, Organism=Drosophila melanogaster, GI116007236, Length=226, Percent_Identity=30.5309734513274, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI23397609, Length=185, Percent_Identity=35.6756756756757, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI21357041, Length=193, Percent_Identity=31.6062176165803, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI28571526, Length=194, Percent_Identity=30.9278350515464, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24644339, Length=195, Percent_Identity=28.7179487179487, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI28571387, Length=222, Percent_Identity=30.6306306306306, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI21355319, Length=212, Percent_Identity=27.3584905660377, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24643142, Length=169, Percent_Identity=34.3195266272189, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24641388, Length=228, Percent_Identity=28.9473684210526, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI21356301, Length=131, Percent_Identity=32.0610687022901, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI24584744, Length=173, Percent_Identity=30.635838150289, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28574402, Length=173, Percent_Identity=30.635838150289, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24639444, Length=170, Percent_Identity=31.1764705882353, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI161076933, Length=172, Percent_Identity=30.8139534883721, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI24584748, Length=172, Percent_Identity=30.8139534883721, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI24641232, Length=226, Percent_Identity=30.5309734513274, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI17737361, Length=185, Percent_Identity=31.3513513513514, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24648944, Length=224, Percent_Identity=29.4642857142857, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI21358495, Length=175, Percent_Identity=29.1428571428571, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24649181, Length=175, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI24640442, Length=223, Percent_Identity=26.9058295964126, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI24644337, Length=114, Percent_Identity=38.5964912280702, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI116007234, Length=226, Percent_Identity=25.6637168141593, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 22801; Mature: 22669
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRLAEQGFGVALVARSRERLEQLQSELAPAKTVALAQDLTDFGAADGVVAAVQTKLGP CCCHHHHCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCH IDVLVNSAGMAYTNTLEGTPVADWERVLALNLTAPFAMTRAVLPGMRARRSGLVVNLVSI HHEEECCCCCEEECCCCCCCCCCHHHEEEEECCCHHHHHHHHHCCHHHHHCCCEEEHHHH AGERAFAGWGAYCASKAGLLAMTRVLAEEVRSEGIRVTALCPGAVDTALWDSEAVAADFE CCCHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCHHHHHHHH RGAMLSAETVAGLVLYTVNLPPDAVLEAAILMPGRGTF CCCEECHHHHHEEEEEEECCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure ARRLAEQGFGVALVARSRERLEQLQSELAPAKTVALAQDLTDFGAADGVVAAVQTKLGP CCHHHHCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCH IDVLVNSAGMAYTNTLEGTPVADWERVLALNLTAPFAMTRAVLPGMRARRSGLVVNLVSI HHEEECCCCCEEECCCCCCCCCCHHHEEEEECCCHHHHHHHHHCCHHHHHCCCEEEHHHH AGERAFAGWGAYCASKAGLLAMTRVLAEEVRSEGIRVTALCPGAVDTALWDSEAVAADFE CCCHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCHHHHHHHH RGAMLSAETVAGLVLYTVNLPPDAVLEAAILMPGRGTF CCCEECHHHHHEEEEEEECCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12950922 [H]