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The map label for this gene is yoaA [H]

Identifier: 37521018

GI number: 37521018

Start: 1552387

End: 1553844

Strand: Direct

Name: yoaA [H]

Synonym: glr1449

Alternate gene names: 37521018

Gene position: 1552387-1553844 (Clockwise)

Preceding gene: 37521016

Following gene: 37521026

Centisome position: 33.32

GC content: 68.04

Gene sequence:

>1458_bases
ATGGGCATTGAGGTTCAGGTCCATCGCCAGCTGTTGCAGTTGCTGCGCTCGGAGCAACTGCCCACCGTCTGGCCCCACCA
GTTGACGATGGGGCGGCTGGTGGCCCGCGCCCTTTCCCAGGGCCGATCGACCCTGGTGCAGGTGAGCGGTTCGGGAGAGC
ACCGCCTCAGCTACCTGTTGCCGGCCCTGAGCGCCCCGGAGCCGGTGATCCTCTGCGCGAGTGAAACCATCCAGCAGCAA
TTGCTCGATGTCGATTTGCCGCTGTTGCGCCGCAACCTGGCTACCGAAAAACCGATCGGTTTGGGCGATCGCTGGCCCGG
TACCGGGTGGCAGGGGGTGCTCATCACCGACCCGCTCACTTTTTTGCGCGACCGTCTGCGGGGAGGGAGTCACTTTCCCG
AGGGCGTCGCTGTGATCTTCGACGGTGCCCACGGCCTGGAGCAGTGGGCCATCCAGGCGCTCTGCGAGCGCATCGAGCCG
GCCGACTGGGACGATCTGCGCGAGGGCGACTTTGAGCGGGCCGAATTCTGGCTCGACTGGCAGGTCGGACTCAGCCGCGC
CCTCTCCAGCCAGCCCCATCACCGCGCGGCCCTGAGTCCCGGCCGCCAGGCCGAACTGGCGAGCGCTCTGGGTGAATCTC
CCCCCAGCGAGGCCTGGCGGCGCTTTCGCGCCGCCCTGGGCGCACCCGAGCGCGCCCACTGGGTGCAGTACTACCGCCAG
AGCAACCAGTTCAGCCTGGTCAGTTCCCCGATCGCCGTGGCGGGCGATTTGGCGCGCGCGCTCTGGCCCCGCCAGCCCGC
CGTCGTCATCGGCGAAGCGCTCGACCCGGCGCGCGAAGCGCGCACTTTCCGGTCCTGGGTGGGCCTGGAGGAGGTGACCT
GTCTGCGCTTTCCCGCCGACCCGCGCGAGCAGGAGGTGCAGCTCTACCTGCCTACGCAACTGAGCGATCCCACGTCTTCT
CAGTACCGGCAGCAGATTGAACCGGTGCTGGTGGAACTGGCGGCCCTTGCCGCCGGGCCGCTGGTGATCTTGTTGCCCGA
AGGTCCGTTGCGCTCCCACCTGGGCACCTTTCTCGCCTCGCAGTTCGGCTCGCGCGTCGGCATTCATCGCCTGCAGCCGC
CCCCCAACGGCATCACCCTGGCCAGTTGGGAATTTTGGGAAGCCAACCACCATCACCTGGGGGCTCCCACGACCCTGGCA
GTCTGCGCGCTGCCTTTTCCGCGCCTCGACGACCCGCTCGTGGCTGCGCGGGTGCAGTGGCTCAAAGACCGCCGCCGCGA
TTGGTTTCGCGAGTACCTGCTGCCCGTCGCCATTGGCCGGCTGCAGCGGGGCATCAGTCCTCTGCGCCAGACCCAAGGTC
TGGTGGCACTGCTCGATAACCGCATCAACCACCGCAGTTACGGCGGCCAACTGCTGGATGCCCTCACCCCCGCCCGTCGG
CTGCGCTACCTGGAGTAA

Upstream 100 bases:

>100_bases
ACCCCGCTTCCATAGATCTTGTTTAGTGAGCTTGCCCGATTAGCGTTCATGGTAACGTTTAGGCCCTGTTGTTCGCACGG
GGAGTCTTACACTGGGTGCC

Downstream 100 bases:

>100_bases
CTTATTGGCATCCCAGGTTCAGCAAACTTTCTGGAGATGCACAGTACAACCCAATCGATTCGCATAAAACAAGGCCGTTC
CTCGTTCGCCTTTACGGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MGIEVQVHRQLLQLLRSEQLPTVWPHQLTMGRLVARALSQGRSTLVQVSGSGEHRLSYLLPALSAPEPVILCASETIQQQ
LLDVDLPLLRRNLATEKPIGLGDRWPGTGWQGVLITDPLTFLRDRLRGGSHFPEGVAVIFDGAHGLEQWAIQALCERIEP
ADWDDLREGDFERAEFWLDWQVGLSRALSSQPHHRAALSPGRQAELASALGESPPSEAWRRFRAALGAPERAHWVQYYRQ
SNQFSLVSSPIAVAGDLARALWPRQPAVVIGEALDPAREARTFRSWVGLEEVTCLRFPADPREQEVQLYLPTQLSDPTSS
QYRQQIEPVLVELAALAAGPLVILLPEGPLRSHLGTFLASQFGSRVGIHRLQPPPNGITLASWEFWEANHHHLGAPTTLA
VCALPFPRLDDPLVAARVQWLKDRRRDWFREYLLPVAIGRLQRGISPLRQTQGLVALLDNRINHRSYGGQLLDALTPARR
LRYLE

Sequences:

>Translated_485_residues
MGIEVQVHRQLLQLLRSEQLPTVWPHQLTMGRLVARALSQGRSTLVQVSGSGEHRLSYLLPALSAPEPVILCASETIQQQ
LLDVDLPLLRRNLATEKPIGLGDRWPGTGWQGVLITDPLTFLRDRLRGGSHFPEGVAVIFDGAHGLEQWAIQALCERIEP
ADWDDLREGDFERAEFWLDWQVGLSRALSSQPHHRAALSPGRQAELASALGESPPSEAWRRFRAALGAPERAHWVQYYRQ
SNQFSLVSSPIAVAGDLARALWPRQPAVVIGEALDPAREARTFRSWVGLEEVTCLRFPADPREQEVQLYLPTQLSDPTSS
QYRQQIEPVLVELAALAAGPLVILLPEGPLRSHLGTFLASQFGSRVGIHRLQPPPNGITLASWEFWEANHHHLGAPTTLA
VCALPFPRLDDPLVAARVQWLKDRRRDWFREYLLPVAIGRLQRGISPLRQTQGLVALLDNRINHRSYGGQLLDALTPARR
LRYLE
>Mature_484_residues
GIEVQVHRQLLQLLRSEQLPTVWPHQLTMGRLVARALSQGRSTLVQVSGSGEHRLSYLLPALSAPEPVILCASETIQQQL
LDVDLPLLRRNLATEKPIGLGDRWPGTGWQGVLITDPLTFLRDRLRGGSHFPEGVAVIFDGAHGLEQWAIQALCERIEPA
DWDDLREGDFERAEFWLDWQVGLSRALSSQPHHRAALSPGRQAELASALGESPPSEAWRRFRAALGAPERAHWVQYYRQS
NQFSLVSSPIAVAGDLARALWPRQPAVVIGEALDPAREARTFRSWVGLEEVTCLRFPADPREQEVQLYLPTQLSDPTSSQ
YRQQIEPVLVELAALAAGPLVILLPEGPLRSHLGTFLASQFGSRVGIHRLQPPPNGITLASWEFWEANHHHLGAPTTLAV
CALPFPRLDDPLVAARVQWLKDRRRDWFREYLLPVAIGRLQRGISPLRQTQGLVALLDNRINHRSYGGQLLDALTPARRL
RYLE

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=437, Percent_Identity=23.5697940503432, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR006935 [H]

Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 54320; Mature: 54189

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIEVQVHRQLLQLLRSEQLPTVWPHQLTMGRLVARALSQGRSTLVQVSGSGEHRLSYLL
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
PALSAPEPVILCASETIQQQLLDVDLPLLRRNLATEKPIGLGDRWPGTGWQGVLITDPLT
HHCCCCCCEEEECHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHH
FLRDRLRGGSHFPEGVAVIFDGAHGLEQWAIQALCERIEPADWDDLREGDFERAEFWLDW
HHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHEEEEH
QVGLSRALSSQPHHRAALSPGRQAELASALGESPPSEAWRRFRAALGAPERAHWVQYYRQ
HHHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
SNQFSLVSSPIAVAGDLARALWPRQPAVVIGEALDPAREARTFRSWVGLEEVTCLRFPAD
CCCEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCHHHHEEEECCCC
PREQEVQLYLPTQLSDPTSSQYRQQIEPVLVELAALAAGPLVILLPEGPLRSHLGTFLAS
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH
QFGSRVGIHRLQPPPNGITLASWEFWEANHHHLGAPTTLAVCALPFPRLDDPLVAARVQW
HHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHH
LKDRRRDWFREYLLPVAIGRLQRGISPLRQTQGLVALLDNRINHRSYGGQLLDALTPARR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCHHHH
LRYLE
HCCCC
>Mature Secondary Structure 
GIEVQVHRQLLQLLRSEQLPTVWPHQLTMGRLVARALSQGRSTLVQVSGSGEHRLSYLL
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
PALSAPEPVILCASETIQQQLLDVDLPLLRRNLATEKPIGLGDRWPGTGWQGVLITDPLT
HHCCCCCCEEEECHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHH
FLRDRLRGGSHFPEGVAVIFDGAHGLEQWAIQALCERIEPADWDDLREGDFERAEFWLDW
HHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHEEEEH
QVGLSRALSSQPHHRAALSPGRQAELASALGESPPSEAWRRFRAALGAPERAHWVQYYRQ
HHHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
SNQFSLVSSPIAVAGDLARALWPRQPAVVIGEALDPAREARTFRSWVGLEEVTCLRFPAD
CCCEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCHHHHEEEECCCC
PREQEVQLYLPTQLSDPTSSQYRQQIEPVLVELAALAAGPLVILLPEGPLRSHLGTFLAS
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH
QFGSRVGIHRLQPPPNGITLASWEFWEANHHHLGAPTTLAVCALPFPRLDDPLVAARVQW
HHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHH
LKDRRRDWFREYLLPVAIGRLQRGISPLRQTQGLVALLDNRINHRSYGGQLLDALTPARR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCHHHH
LRYLE
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]