| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is tldD [C]
Identifier: 37521013
GI number: 37521013
Start: 1545757
End: 1547121
Strand: Direct
Name: tldD [C]
Synonym: glr1444
Alternate gene names: 37521013
Gene position: 1545757-1547121 (Clockwise)
Preceding gene: 37521010
Following gene: 37521015
Centisome position: 33.18
GC content: 67.4
Gene sequence:
>1365_bases ATGCAAGACAGACTCCTCGCGGCCCTGGCTCCCTATCGCTCGGCGGTCGATTATTTGGAGATTCGCCTGGAGCGCGGTGA ATCGAGTTCGGTGTCCTTTCGCGGGCCGCGCCTGGAGGCGATCGACCGCAGCTTCGATCTGGCGGGCGGCATCCGCGCCT GCCACCGCGGCGGCTGGAGCTTTGTGACCTTCAGCGACCTGGGCGAACTCGAAAGCCGGGTGGCCGAGGCGGTGAGCCAG GCGAAGCTGGTGGGCCGCGAGACGACCCAACTGGCGGCGGTCGAAGCGGTCGAAGCGACCGTGCGCGCCGAGCTGGGGCG CGACCCGCGCGGGGTGTCTTTGGGGGAGAAGCGCGATTTGCTGGCCCATTACAACCAATTGCTCCTAGAAGCCGACCCCC GCATCCAGACGACCACCGCCGGGCTCACCGACCGTTTTCGGACGGTCTGGTTCGTCAACACCACCGGTACGGTCCTGGAG CAGGAGCGCCTCGATGTGACGGGCCGCTTCGGGGTGGTCGCCCGCGACGGCGGCACGATCCGCCAGGGCTTCGAATCGGT CCATTCGCGCAGCGACTTTGGCGCCCTGGTCGGCATCGAAGCGCGGGTGCTCTCCGCCGTCGAGCGCGCCCTGCGCCAGC TTGAAGCCACGCCCATCAAGGCGGGCCGCTACACCGCCGTGCTCGATCCGTATCTGGCCGGGGTGTTCATCCATGAAGCC TTCGGCCACCTTTCGGAGGCCGATTTTATCTACGAGAACCCGCGCATGCAGCAGTTGCTGCAACTGGGTAAACCGATCGC CGCCCCCCAGCTCAATGTCGTCGACGACGGCACCGTCGCCGGTCAGCCGGGCACCCTCGCCTACGACGATGAGGGGGTAC CCACGCGGCGCAAGTACCTGATCAAAGACGGCATACTCACCGAACGGCTGCACAACCGCGAGACCGCCGGCAAGCTGGGG GAGGCACCCACCGGCAACGCCCGCGCCCTGGGGGGCACCTATCCTCCCATTGTGCGGATGACCAACACCGGCATCCTGGC GGGCGACACGCCCTTCGAGGAAATGATCGCGGGCATCGACGAAGGGGTCTACGCCGTGCGCATGCTGGGCGGTCAGACCA ACGGCGAGATGTTCACCTTCGCCGCCGCCGAGGGCTTCATGATCCGCGGCGGCCAAATCGCCGAACCGGTGAGCGACATC ACCCTCACCGGCAATGTCTTCGAGACGCTCAAGGACATCGAAGCGATCGGCTGCGATCAAGTCTGGCTGAGCGGCGGCTG CGGCAAGGGCGGGCAATCGCCCCTGGCGGTGGCGGTGGGCGGACCGCACCTGCGCATCGGCAAGGTCGTGGTGGGCGGCC GCTAA
Upstream 100 bases:
>100_bases CATTGCAAACAAATTCATTGTAGTACACAAAAATTTATCTACGGGGAGAGGCGTAGTTCCAAGCGCCGTACAATGGGGTC TGTCGTCGCTGGCCAATTCG
Downstream 100 bases:
>100_bases ACGCCCGGACGGCCGGAGCCGGACCCCGACGGCGCGAAGGTGGCCTTGGCCCCGGGCAGTTCGTAGTATGCGGGCAGCGT CCCCTCCGGCAAGACCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MQDRLLAALAPYRSAVDYLEIRLERGESSSVSFRGPRLEAIDRSFDLAGGIRACHRGGWSFVTFSDLGELESRVAEAVSQ AKLVGRETTQLAAVEAVEATVRAELGRDPRGVSLGEKRDLLAHYNQLLLEADPRIQTTTAGLTDRFRTVWFVNTTGTVLE QERLDVTGRFGVVARDGGTIRQGFESVHSRSDFGALVGIEARVLSAVERALRQLEATPIKAGRYTAVLDPYLAGVFIHEA FGHLSEADFIYENPRMQQLLQLGKPIAAPQLNVVDDGTVAGQPGTLAYDDEGVPTRRKYLIKDGILTERLHNRETAGKLG EAPTGNARALGGTYPPIVRMTNTGILAGDTPFEEMIAGIDEGVYAVRMLGGQTNGEMFTFAAAEGFMIRGGQIAEPVSDI TLTGNVFETLKDIEAIGCDQVWLSGGCGKGGQSPLAVAVGGPHLRIGKVVVGGR
Sequences:
>Translated_454_residues MQDRLLAALAPYRSAVDYLEIRLERGESSSVSFRGPRLEAIDRSFDLAGGIRACHRGGWSFVTFSDLGELESRVAEAVSQ AKLVGRETTQLAAVEAVEATVRAELGRDPRGVSLGEKRDLLAHYNQLLLEADPRIQTTTAGLTDRFRTVWFVNTTGTVLE QERLDVTGRFGVVARDGGTIRQGFESVHSRSDFGALVGIEARVLSAVERALRQLEATPIKAGRYTAVLDPYLAGVFIHEA FGHLSEADFIYENPRMQQLLQLGKPIAAPQLNVVDDGTVAGQPGTLAYDDEGVPTRRKYLIKDGILTERLHNRETAGKLG EAPTGNARALGGTYPPIVRMTNTGILAGDTPFEEMIAGIDEGVYAVRMLGGQTNGEMFTFAAAEGFMIRGGQIAEPVSDI TLTGNVFETLKDIEAIGCDQVWLSGGCGKGGQSPLAVAVGGPHLRIGKVVVGGR >Mature_454_residues MQDRLLAALAPYRSAVDYLEIRLERGESSSVSFRGPRLEAIDRSFDLAGGIRACHRGGWSFVTFSDLGELESRVAEAVSQ AKLVGRETTQLAAVEAVEATVRAELGRDPRGVSLGEKRDLLAHYNQLLLEADPRIQTTTAGLTDRFRTVWFVNTTGTVLE QERLDVTGRFGVVARDGGTIRQGFESVHSRSDFGALVGIEARVLSAVERALRQLEATPIKAGRYTAVLDPYLAGVFIHEA FGHLSEADFIYENPRMQQLLQLGKPIAAPQLNVVDDGTVAGQPGTLAYDDEGVPTRRKYLIKDGILTERLHNRETAGKLG EAPTGNARALGGTYPPIVRMTNTGILAGDTPFEEMIAGIDEGVYAVRMLGGQTNGEMFTFAAAEGFMIRGGQIAEPVSDI TLTGNVFETLKDIEAIGCDQVWLSGGCGKGGQSPLAVAVGGPHLRIGKVVVGGR
Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]
COG id: COG0312
COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase U62 family [H]
Homologues:
Organism=Escherichia coli, GI1789640, Length=362, Percent_Identity=35.0828729281768, Blast_Score=167, Evalue=9e-43, Organism=Escherichia coli, GI1790682, Length=420, Percent_Identity=26.6666666666667, Blast_Score=80, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002510 [H]
Pfam domain/function: PF01523 PmbA_TldD [H]
EC number: NA
Molecular weight: Translated: 48795; Mature: 48795
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDRLLAALAPYRSAVDYLEIRLERGESSSVSFRGPRLEAIDRSFDLAGGIRACHRGGWS CCCHHHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCHHHHCCCCCHHHHHHHHHCCCCC FVTFSDLGELESRVAEAVSQAKLVGRETTQLAAVEAVEATVRAELGRDPRGVSLGEKRDL EEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH LAHYNQLLLEADPRIQTTTAGLTDRFRTVWFVNTTGTVLEQERLDVTGRFGVVARDGGTI HHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCCHHHHHHCCCCCCEEEEEECCCHH RQGFESVHSRSDFGALVGIEARVLSAVERALRQLEATPIKAGRYTAVLDPYLAGVFIHEA HHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHH FGHLSEADFIYENPRMQQLLQLGKPIAAPQLNVVDDGTVAGQPGTLAYDDEGVPTRRKYL HCCCCCCCCEECCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCHHHHHH IKDGILTERLHNRETAGKLGEAPTGNARALGGTYPPIVRMTNTGILAGDTPFEEMIAGID HHCCHHHHHHHCHHHHHHCCCCCCCCCEECCCCCCCEEEEECCEEEECCCCHHHHHHCCC EGVYAVRMLGGQTNGEMFTFAAAEGFMIRGGQIAEPVSDITLTGNVFETLKDIEAIGCDQ CCCEEEEEECCCCCCCEEEEEECCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHCCCCC VWLSGGCGKGGQSPLAVAVGGPHLRIGKVVVGGR EEECCCCCCCCCCCEEEEECCCCEEEEEEEECCC >Mature Secondary Structure MQDRLLAALAPYRSAVDYLEIRLERGESSSVSFRGPRLEAIDRSFDLAGGIRACHRGGWS CCCHHHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCHHHHCCCCCHHHHHHHHHCCCCC FVTFSDLGELESRVAEAVSQAKLVGRETTQLAAVEAVEATVRAELGRDPRGVSLGEKRDL EEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH LAHYNQLLLEADPRIQTTTAGLTDRFRTVWFVNTTGTVLEQERLDVTGRFGVVARDGGTI HHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCCHHHHHHCCCCCCEEEEEECCCHH RQGFESVHSRSDFGALVGIEARVLSAVERALRQLEATPIKAGRYTAVLDPYLAGVFIHEA HHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHH FGHLSEADFIYENPRMQQLLQLGKPIAAPQLNVVDDGTVAGQPGTLAYDDEGVPTRRKYL HCCCCCCCCEECCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCHHHHHH IKDGILTERLHNRETAGKLGEAPTGNARALGGTYPPIVRMTNTGILAGDTPFEEMIAGID HHCCHHHHHHHCHHHHHHCCCCCCCCCEECCCCCCCEEEEECCEEEECCCCHHHHHHCCC EGVYAVRMLGGQTNGEMFTFAAAEGFMIRGGQIAEPVSDITLTGNVFETLKDIEAIGCDQ CCCEEEEEECCCCCCCEEEEEECCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHCCCCC VWLSGGCGKGGQSPLAVAVGGPHLRIGKVVVGGR EEECCCCCCCCCCCEEEEECCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]