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The map label for this gene is fraH [H]

Identifier: 37520975

GI number: 37520975

Start: 1506812

End: 1507567

Strand: Reverse

Name: fraH [H]

Synonym: gll1406

Alternate gene names: 37520975

Gene position: 1507567-1506812 (Counterclockwise)

Preceding gene: 37520976

Following gene: 37520974

Centisome position: 32.36

GC content: 66.93

Gene sequence:

>756_bases
ATGGCTATCGTCTGCTCCCAGTGCCAGCACGCCAACCCCGACACCGCCCTGAACTGCCGGCGCTGCCAGGGGGAGATCGC
CGTACTGTGTCTTGAATGCGGCAGCATCAACCCGACACCCTGCCAGTATTGCGGCGAATGCGGCGTCGAGTTGCCCCACG
TCGTTTCCGCCCCACCGCAGCCGGTGGCTATTGCCGCTTCGCCAGTCGTTGCATCGGTCCTTGCCCCATCGCCTGCTCCT
GAGGCCCCCCCCGCATCCGCCCCTGTCGTGCCCCCCGAGCGGCGTTCCGCCCGCCGGGCCGACCCGGCCCCTGTCGATCC
ACCTCTACCCCAGGTTGCCCGCCCCATGGAAAGCCCGCCTCCGCGCCCCAACGCCGGTGCGCCGCCGCCCTTCGCCTCGC
CCGGCACGCGCCTGCAGATTGCCACCGCCGTCCTCGTCCATATCGGCAGCGACGAGCGGCTCGAACTGCCGGCGGATCAG
CCCCTGGTCTACCTCGGCAAACCCAACGAAGATCTACCGCCCGATATCGACGTCTCCCACCTGCCCGGCGCAGAAGTGGT
CTCGCGCGTCCACGCCGCCATCCACAGCAGCGAAGGAAATTTTGCCCTCGAGGACGCCGGCAGCAGCAACGGCACCTTCT
TGAACGGCGAACTGATCAAACCGGGAACGCGCTTTCGCCGTAAGCTCAAAGCGGGCGACACCATCGCCCTCGGCAAAGCC
AACAAGATGAGCTTCCGCTTCGAAATCGAAGAGTAA

Upstream 100 bases:

>100_bases
CACCGCCCCCCGGCAAGGACGCTCCCAAAAATCCCGGCAAACCCGCCGCCCCGGCCCTTAAAACCGCCCCCGAACCCACC
GCTCCCGCTCCCTAACCGCC

Downstream 100 bases:

>100_bases
ACCGCCCATGCACTATCTGGTCACCGGCAATCGCCAGGCCCTCGACCGGCGCTACCGGGTGGTCGGCCAGTCCCCGGCAA
TCGCCCGGGATCTGCTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MAIVCSQCQHANPDTALNCRRCQGEIAVLCLECGSINPTPCQYCGECGVELPHVVSAPPQPVAIAASPVVASVLAPSPAP
EAPPASAPVVPPERRSARRADPAPVDPPLPQVARPMESPPPRPNAGAPPPFASPGTRLQIATAVLVHIGSDERLELPADQ
PLVYLGKPNEDLPPDIDVSHLPGAEVVSRVHAAIHSSEGNFALEDAGSSNGTFLNGELIKPGTRFRRKLKAGDTIALGKA
NKMSFRFEIEE

Sequences:

>Translated_251_residues
MAIVCSQCQHANPDTALNCRRCQGEIAVLCLECGSINPTPCQYCGECGVELPHVVSAPPQPVAIAASPVVASVLAPSPAP
EAPPASAPVVPPERRSARRADPAPVDPPLPQVARPMESPPPRPNAGAPPPFASPGTRLQIATAVLVHIGSDERLELPADQ
PLVYLGKPNEDLPPDIDVSHLPGAEVVSRVHAAIHSSEGNFALEDAGSSNGTFLNGELIKPGTRFRRKLKAGDTIALGKA
NKMSFRFEIEE
>Mature_250_residues
AIVCSQCQHANPDTALNCRRCQGEIAVLCLECGSINPTPCQYCGECGVELPHVVSAPPQPVAIAASPVVASVLAPSPAPE
APPASAPVVPPERRSARRADPAPVDPPLPQVARPMESPPPRPNAGAPPPFASPGTRLQIATAVLVHIGSDERLELPADQP
LVYLGKPNEDLPPDIDVSHLPGAEVVSRVHAAIHSSEGNFALEDAGSSNGTFLNGELIKPGTRFRRKLKAGDTIALGKAN
KMSFRFEIEE

Specific function: Putative heterocyst to vegetative cell connection [H]

COG id: COG1716

COG function: function code T; FOG: FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FHA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000253
- InterPro:   IPR008984 [H]

Pfam domain/function: PF00498 FHA [H]

EC number: NA

Molecular weight: Translated: 26315; Mature: 26184

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIVCSQCQHANPDTALNCRRCQGEIAVLCLECGSINPTPCQYCGECGVELPHVVSAPPQ
CEEECCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCHHHCCCCC
PVAIAASPVVASVLAPSPAPEAPPASAPVVPPERRSARRADPAPVDPPLPQVARPMESPP
CEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHCCCCCCC
PRPNAGAPPPFASPGTRLQIATAVLVHIGSDERLELPADQPLVYLGKPNEDLPPDIDVSH
CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCCEEEECCCCCCCCCCCCCCC
LPGAEVVSRVHAAIHSSEGNFALEDAGSSNGTFLNGELIKPGTRFRRKLKAGDTIALGKA
CCHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECEEECCHHHHHHHHCCCCEEEECCC
NKMSFRFEIEE
CCEEEEEEECC
>Mature Secondary Structure 
AIVCSQCQHANPDTALNCRRCQGEIAVLCLECGSINPTPCQYCGECGVELPHVVSAPPQ
EEECCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCHHHCCCCC
PVAIAASPVVASVLAPSPAPEAPPASAPVVPPERRSARRADPAPVDPPLPQVARPMESPP
CEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHCCCCCCC
PRPNAGAPPPFASPGTRLQIATAVLVHIGSDERLELPADQPLVYLGKPNEDLPPDIDVSH
CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCCEEEECCCCCCCCCCCCCCC
LPGAEVVSRVHAAIHSSEGNFALEDAGSSNGTFLNGELIKPGTRFRRKLKAGDTIALGKA
CCHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECEEECCHHHHHHHHCCCCEEEECCC
NKMSFRFEIEE
CCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]