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The map label for this gene is nifU [H]

Identifier: 37520943

GI number: 37520943

Start: 1470481

End: 1470927

Strand: Direct

Name: nifU [H]

Synonym: glr1374

Alternate gene names: 37520943

Gene position: 1470481-1470927 (Clockwise)

Preceding gene: 37520942

Following gene: 37520944

Centisome position: 31.56

GC content: 63.53

Gene sequence:

>447_bases
ATGTTCTCGGATCTGCGCGATCTCTATCAAGAAGTGATCCTCGACCACTACAAGCGTCCGCGCAATTTCGGATTGCTGGA
GGCGGCCAACCGCGAGGCGGAAGGCCACAATCCGCTCTGCGGCGACCAGGTGACCATTTATCTGCAGGTCGAAGACGGCA
TCGTCAAAGACATCCGCTTTCAGGGAGCCGGCTGCGCCATTTCGACCGCCTCCGCCTCGTTGATGACCGACGCGCTCAAG
GGCAAGTCCGTGCAGGAAGTCGACACCCTGTTCGAGCGCTTCCACCGGCTGGTGACCGACAGCAGTGCCGAGGCCGGCCC
GGAGTTGGGAAAACTCGCGATCCTAGCGGGGGTGCGCGAGTACCCCGTGCGCGTCAAGTGCGCCACCCTTGCCTGGCATA
CCCTACAGGCCGCCCTGCGCGGAAGCGGCGCGGTGACGACGGAGTAA

Upstream 100 bases:

>100_bases
TGCCGGCCACCGCCCGCGCCTCGTTCGCCTTTTACAACACCCGCGCCGAGGTCGATGCGCTGGTGGCGGCAATCCAACAA
GTGCAGGAGATGTTTAGCTG

Downstream 100 bases:

>100_bases
CCACCATGAACAAAGACAGTGAACTGCAATCGCAGGTGGTCGAAGCCCTCAAGGGGGTCTACGACCCGGAAATTCCGATC
AACATCTACGACCTGGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MFSDLRDLYQEVILDHYKRPRNFGLLEAANREAEGHNPLCGDQVTIYLQVEDGIVKDIRFQGAGCAISTASASLMTDALK
GKSVQEVDTLFERFHRLVTDSSAEAGPELGKLAILAGVREYPVRVKCATLAWHTLQAALRGSGAVTTE

Sequences:

>Translated_148_residues
MFSDLRDLYQEVILDHYKRPRNFGLLEAANREAEGHNPLCGDQVTIYLQVEDGIVKDIRFQGAGCAISTASASLMTDALK
GKSVQEVDTLFERFHRLVTDSSAEAGPELGKLAILAGVREYPVRVKCATLAWHTLQAALRGSGAVTTE
>Mature_148_residues
MFSDLRDLYQEVILDHYKRPRNFGLLEAANREAEGHNPLCGDQVTIYLQVEDGIVKDIRFQGAGCAISTASASLMTDALK
GKSVQEVDTLFERFHRLVTDSSAEAGPELGKLAILAGVREYPVRVKCATLAWHTLQAALRGSGAVTTE

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI56699456, Length=136, Percent_Identity=33.8235294117647, Blast_Score=68, Evalue=3e-12,
Organism=Escherichia coli, GI1788878, Length=136, Percent_Identity=33.0882352941176, Blast_Score=70, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6324800, Length=140, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21355597, Length=136, Percent_Identity=32.3529411764706, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 16193; Mature: 16193

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSDLRDLYQEVILDHYKRPRNFGLLEAANREAEGHNPLCGDQVTIYLQVEDGIVKDIRF
CCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEHHEE
QGAGCAISTASASLMTDALKGKSVQEVDTLFERFHRLVTDSSAEAGPELGKLAILAGVRE
CCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
YPVRVKCATLAWHTLQAALRGSGAVTTE
CCEEEEHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MFSDLRDLYQEVILDHYKRPRNFGLLEAANREAEGHNPLCGDQVTIYLQVEDGIVKDIRF
CCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEHHEE
QGAGCAISTASASLMTDALKGKSVQEVDTLFERFHRLVTDSSAEAGPELGKLAILAGVRE
CCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
YPVRVKCATLAWHTLQAALRGSGAVTTE
CCEEEEHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]