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The map label for this gene is sufD [C]

Identifier: 37520941

GI number: 37520941

Start: 1467897

End: 1469231

Strand: Direct

Name: sufD [C]

Synonym: glr1372

Alternate gene names: 37520941

Gene position: 1467897-1469231 (Clockwise)

Preceding gene: 37520940

Following gene: 37520942

Centisome position: 31.51

GC content: 64.57

Gene sequence:

>1335_bases
GTGCCTAGGGAGTCTGCCATGCCCGCTGCAATCGAAAAAAACGTGTTCGTTCCCGACTTCGAGCCTTTTATTGCCGCTCG
CCCGGGCGAGGCTGAAGCGGTGCTTGCCTCGCGGCGCGCGGCGATGGGACGCTTTGTACAGCTCGGAGTACCCCATCGGC
GCCTGGAGAACTGGCGGCACACCGATCTTTCGGCCCTCACGAAAAACCGGTTTACCCTCGCAGCCGAACCGGTTTCCATC
GATCCGGTTCAGTTGGTTCCCTACACTTTTTCCGGTGCGCGCGAACTGGTATTTGTGGACGGACTTTTCAGCGCGGAACT
GTCAAACCCCGGCAAAGCGCAGTCTGGTCTGCTTCTGGGCAGTTATGCCGAGTGTCTGCCAGAGGATGCGCTGCGGTGGG
CGGTTGCTCCCGAGGCCGCCGAAGCGCTCGAAGCGCTCAACGGGGCCTACTGGCAGGACGGGGCGTGCGTGGATCTGGCG
GCCGATGCCCGCGTCGAAGAACCGATTCACCTGCTGTTCATCGCCACCGGGGCCGATTTGCCCCTCGCCCAGTTTGTGCG
CAACCGGATCACAGCCGGGCCGGGCAGCCGGGCCACGATTATCGAGACCTACGCAAGCCTCGGGGCGGGTGTGCATTTCA
CCTGCCCCGTCGGCGCTGTCGATGTGGGAGCCGACGCCGACCTCGACCACTACCGCCTCGGGCAGGAGAACGCCGCCGCC
TTTCACCTGGCGACCTCGCGGGTGCGCCTTGGGCGCGACGCCCGCTTCAAGTCTCTCGCGTTCGTGGCCGGTGGCGGCCT
GGTGCGCCATGACTTGTTTGCCGAACTGGCCGGTCCCGGCAGCGAAGCGACCCTGCACGGACTCTATCTGGCAGGCGGCA
CCCGGCACGTCGATCATCATCTCTGGGTGCGCCACAGTGCCCCCCACGCGGCAAGCCGCCAGATCTACAAGGGTATCCTC
GCCGGCCGGGCGCGCGCCGTCTTTAACGGCAACGTCTTTGTTGCCTCCGAAGCGGCCAAGACCGACGCAAAGCAGACCAA
CCGCAACCTGTTGCTCTCGGACGCAGCGCTGGTGCACTCCAACCCCCAACTGGAGATCTACGCAGGGGATGTGCGCTGCA
CCCACGGCTCCACCGTGGGACAACTCGATGAAGAAGCACTCTTCTACCTGCGCTCGCGCGGCCTGGATGAGGCGCAAGCC
AAAAATCTGCTGACCCGCGCCTTTGCAGGCGACCTGTTCGAAGATATCCGGCTTGCCGCCCTGCGCGACCGGCTGGAGAC
CCTTTTGTACACCTGGCTCTCCTTTGAGGCCGGAATTGCCGGAACGCAACCATGA

Upstream 100 bases:

>100_bases
GTGCTGATGAACGGCCGCATCGTGCGCTCGGGTGGGCGTGAACTGGCCCTCGAACTCGAAGAAAAAGGCTACGGCTGGCT
CGAAGCGGAGGTGACCGTCG

Downstream 100 bases:

>100_bases
CCTTCACCGCCCAAGCTCACCGGACCCTGACTCCCGCCGCCGTCGAACGCCTGCGCGCCGATTTTCCGATTTTGCGCCAG
ACCGTCTACGGCAAGCCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MPRESAMPAAIEKNVFVPDFEPFIAARPGEAEAVLASRRAAMGRFVQLGVPHRRLENWRHTDLSALTKNRFTLAAEPVSI
DPVQLVPYTFSGARELVFVDGLFSAELSNPGKAQSGLLLGSYAECLPEDALRWAVAPEAAEALEALNGAYWQDGACVDLA
ADARVEEPIHLLFIATGADLPLAQFVRNRITAGPGSRATIIETYASLGAGVHFTCPVGAVDVGADADLDHYRLGQENAAA
FHLATSRVRLGRDARFKSLAFVAGGGLVRHDLFAELAGPGSEATLHGLYLAGGTRHVDHHLWVRHSAPHAASRQIYKGIL
AGRARAVFNGNVFVASEAAKTDAKQTNRNLLLSDAALVHSNPQLEIYAGDVRCTHGSTVGQLDEEALFYLRSRGLDEAQA
KNLLTRAFAGDLFEDIRLAALRDRLETLLYTWLSFEAGIAGTQP

Sequences:

>Translated_444_residues
MPRESAMPAAIEKNVFVPDFEPFIAARPGEAEAVLASRRAAMGRFVQLGVPHRRLENWRHTDLSALTKNRFTLAAEPVSI
DPVQLVPYTFSGARELVFVDGLFSAELSNPGKAQSGLLLGSYAECLPEDALRWAVAPEAAEALEALNGAYWQDGACVDLA
ADARVEEPIHLLFIATGADLPLAQFVRNRITAGPGSRATIIETYASLGAGVHFTCPVGAVDVGADADLDHYRLGQENAAA
FHLATSRVRLGRDARFKSLAFVAGGGLVRHDLFAELAGPGSEATLHGLYLAGGTRHVDHHLWVRHSAPHAASRQIYKGIL
AGRARAVFNGNVFVASEAAKTDAKQTNRNLLLSDAALVHSNPQLEIYAGDVRCTHGSTVGQLDEEALFYLRSRGLDEAQA
KNLLTRAFAGDLFEDIRLAALRDRLETLLYTWLSFEAGIAGTQP
>Mature_443_residues
PRESAMPAAIEKNVFVPDFEPFIAARPGEAEAVLASRRAAMGRFVQLGVPHRRLENWRHTDLSALTKNRFTLAAEPVSID
PVQLVPYTFSGARELVFVDGLFSAELSNPGKAQSGLLLGSYAECLPEDALRWAVAPEAAEALEALNGAYWQDGACVDLAA
DARVEEPIHLLFIATGADLPLAQFVRNRITAGPGSRATIIETYASLGAGVHFTCPVGAVDVGADADLDHYRLGQENAAAF
HLATSRVRLGRDARFKSLAFVAGGGLVRHDLFAELAGPGSEATLHGLYLAGGTRHVDHHLWVRHSAPHAASRQIYKGILA
GRARAVFNGNVFVASEAAKTDAKQTNRNLLLSDAALVHSNPQLEIYAGDVRCTHGSTVGQLDEEALFYLRSRGLDEAQAK
NLLTRAFAGDLFEDIRLAALRDRLETLLYTWLSFEAGIAGTQP

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=380, Percent_Identity=33.9473684210526, Blast_Score=209, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 47835; Mature: 47703

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRESAMPAAIEKNVFVPDFEPFIAARPGEAEAVLASRRAAMGRFVQLGVPHRRLENWRH
CCCCCCCCHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHCCCC
TDLSALTKNRFTLAAEPVSIDPVQLVPYTFSGARELVFVDGLFSAELSNPGKAQSGLLLG
CCHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEECCHHHCCCCCCCCCCCEEEC
SYAECLPEDALRWAVAPEAAEALEALNGAYWQDGACVDLAADARVEEPIHLLFIATGADL
HHHHHCCHHHHHEECCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCC
PLAQFVRNRITAGPGSRATIIETYASLGAGVHFTCPVGAVDVGADADLDHYRLGQENAAA
CHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEECCCCCEECCCCCCCHHHCCCCCCCEE
FHLATSRVRLGRDARFKSLAFVAGGGLVRHDLFAELAGPGSEATLHGLYLAGGTRHVDHH
EEEEHHHHHCCCCCCHHEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEECCCEECCCE
LWVRHSAPHAASRQIYKGILAGRARAVFNGNVFVASEAAKTDAKQTNRNLLLSDAALVHS
EEEEECCCCHHHHHHHHHHHHCCCEEEEECCEEEECCHHHCCHHHCCCCEEEECCEEEEC
NPQLEIYAGDVRCTHGSTVGQLDEEALFYLRSRGLDEAQAKNLLTRAFAGDLFEDIRLAA
CCCEEEEECCEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRDRLETLLYTWLSFEAGIAGTQP
HHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PRESAMPAAIEKNVFVPDFEPFIAARPGEAEAVLASRRAAMGRFVQLGVPHRRLENWRH
CCCCCCCHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHCCCC
TDLSALTKNRFTLAAEPVSIDPVQLVPYTFSGARELVFVDGLFSAELSNPGKAQSGLLLG
CCHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEECCHHHCCCCCCCCCCCEEEC
SYAECLPEDALRWAVAPEAAEALEALNGAYWQDGACVDLAADARVEEPIHLLFIATGADL
HHHHHCCHHHHHEECCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCC
PLAQFVRNRITAGPGSRATIIETYASLGAGVHFTCPVGAVDVGADADLDHYRLGQENAAA
CHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEECCCCCEECCCCCCCHHHCCCCCCCEE
FHLATSRVRLGRDARFKSLAFVAGGGLVRHDLFAELAGPGSEATLHGLYLAGGTRHVDHH
EEEEHHHHHCCCCCCHHEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEECCCEECCCE
LWVRHSAPHAASRQIYKGILAGRARAVFNGNVFVASEAAKTDAKQTNRNLLLSDAALVHS
EEEEECCCCHHHHHHHHHHHHCCCEEEEECCEEEECCHHHCCHHHCCCCEEEECCEEEEC
NPQLEIYAGDVRCTHGSTVGQLDEEALFYLRSRGLDEAQAKNLLTRAFAGDLFEDIRLAA
CCCEEEEECCEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRDRLETLLYTWLSFEAGIAGTQP
HHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]