Click here to switch to the map view.

The map label for this gene is aau3 [H]

Identifier: 37520938

GI number: 37520938

Start: 1465187

End: 1465666

Strand: Direct

Name: aau3 [H]

Synonym: glr1369

Alternate gene names: 37520938

Gene position: 1465187-1465666 (Clockwise)

Preceding gene: 37520937

Following gene: 37520939

Centisome position: 31.45

GC content: 66.46

Gene sequence:

>480_bases
ATGATCCGCATCACCCGGCAGTCAGACTACGGCATCGTGCTGGTAAGCCATCTGGCGGCGCATCCTGAGCGCAGCTTCGG
GGCGCCCGAGTTGGCGGCCCAGGTCAACCTGCCGCTGCCCATTGTGCGCAAGATCCTCAAGCTGCTGGCGCGTGAAGGGT
TGTTAGTCTCGCAGCGCGGCGTCAAGGGCGGCTACTGCCTGGCGTTGCCGCCGGCGGTGATCTCGGTGGCCGATGTGGTC
ACGGCCCTCGAAGGGCCGATAGCACTCACCGAGTGCATCGAAGATGCGCCGGGGGGCGGTTGCGCCCACGAGGCGGTCTG
CCCCCTGATGCCCAAGTGGCAGCGCATCAACGCCGTTATCCAGCAAGCCCTCTCAGGCATCAGTCTCAGCGAACTGATTG
CTCCCTGGCCTCAGGAACTACCCGTCCTGTCCCACGCCGCACGCCCGGTGCCGGCGGCTGTCCAGACACCCCTACGCTGA

Upstream 100 bases:

>100_bases
GCTTGCAAATTCAGCAAATGCGGCCCGTTGTTCCACTTTCGCGGGCGGCACAGCTCGAAATAGCACTAAAATGGTCTTGT
ATGACGGCAGGTAACAGCCC

Downstream 100 bases:

>100_bases
TCTTACGGAGCGACCATGACCACTTCGACCCAGACGATTGAACAACTGGCGGGCAAGGAGTACCAGTACGGATTTGTCAC
CGACATCGAGCAGGAAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MIRITRQSDYGIVLVSHLAAHPERSFGAPELAAQVNLPLPIVRKILKLLAREGLLVSQRGVKGGYCLALPPAVISVADVV
TALEGPIALTECIEDAPGGGCAHEAVCPLMPKWQRINAVIQQALSGISLSELIAPWPQELPVLSHAARPVPAAVQTPLR

Sequences:

>Translated_159_residues
MIRITRQSDYGIVLVSHLAAHPERSFGAPELAAQVNLPLPIVRKILKLLAREGLLVSQRGVKGGYCLALPPAVISVADVV
TALEGPIALTECIEDAPGGGCAHEAVCPLMPKWQRINAVIQQALSGISLSELIAPWPQELPVLSHAARPVPAAVQTPLR
>Mature_159_residues
MIRITRQSDYGIVLVSHLAAHPERSFGAPELAAQVNLPLPIVRKILKLLAREGLLVSQRGVKGGYCLALPPAVISVADVV
TALEGPIALTECIEDAPGGGCAHEAVCPLMPKWQRINAVIQQALSGISLSELIAPWPQELPVLSHAARPVPAAVQTPLR

Specific function: Required for growth utilizing PHB cycle intermediates [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16850; Mature: 16850

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRITRQSDYGIVLVSHLAAHPERSFGAPELAAQVNLPLPIVRKILKLLAREGLLVSQRG
CEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCEEECCC
VKGGYCLALPPAVISVADVVTALEGPIALTECIEDAPGGGCAHEAVCPLMPKWQRINAVI
CCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHH
QQALSGISLSELIAPWPQELPVLSHAARPVPAAVQTPLR
HHHHCCCCHHHHHCCCCCCCCHHHHCCCCCCHHHCCCCC
>Mature Secondary Structure
MIRITRQSDYGIVLVSHLAAHPERSFGAPELAAQVNLPLPIVRKILKLLAREGLLVSQRG
CEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCEEECCC
VKGGYCLALPPAVISVADVVTALEGPIALTECIEDAPGGGCAHEAVCPLMPKWQRINAVI
CCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHH
QQALSGISLSELIAPWPQELPVLSHAARPVPAAVQTPLR
HHHHCCCCHHHHHCCCCCCCCHHHHCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10735852; 11481430 [H]