| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is yugF [H]
Identifier: 37520937
GI number: 37520937
Start: 1463653
End: 1464552
Strand: Direct
Name: yugF [H]
Synonym: glr1368
Alternate gene names: 37520937
Gene position: 1463653-1464552 (Clockwise)
Preceding gene: 37520936
Following gene: 37520938
Centisome position: 31.42
GC content: 61.44
Gene sequence:
>900_bases ATGGTGGAAGCCGCGGTATTGTTTCAGCCTCCGGGCTTCGTCCGCAAGAGCGCCTTCAGCTCCAGCGGCCGGATCAACTA TTACGAGTCCTGTCCCGCAGCCAACCCCACCGCGAAGACGATGGTGTTCCTGCACGGCTTCGGGGGTGGGTCTTCTTCTT ATGAATGGTCGAAGGTGTACCCGGCCTTTGCGGCCGACTACCGGGTGCTCGCCCCGGATTTGCCCGGTTGGGGCTTCTCC GAGCATCGCGACTCCGAGTACGGCAAAGAAGATTACCTGAGGGCGATTGGCGAATTTCTAGCCGACGTGGCGAGCGGCCG GGCGATTGTGATCGCCTCGAGTGTGGTTGCAGCTTTGACCTTGCGGCTTTCGACCGAACAGCCCGAGTACTTCGAGGCGA TCGTCGCCATGAATCCGTCGGGACTTTCGGACTTCGGCAAGCCTTACGACGGCAGCTTCTTTGGTTTCGTGGGCAACCTG CCGGGGATCAACCAGTTTGTCTACTCGCAACTGATCACCACCACCGGCGGGATCCGCGATTTTTTGCGCCGCTCGCTGTT TGTGCGCGAAAACCGGATCAGCGAAGAGATCGTGGATGCCTACCACGCCTCGGCCTCGGAACCGAACGGCCAGTACGCCG CCTACTCGTTTCTCAAGGGCAACTTCAGCTTCGACCTGGCCGAATGGATGCCGCGGCTGACGGTGCCGGTGGCCATCCTC TGGGGTGCCCAATCGAAGTACGCCTCTCCCGATACGGGTGAGCGCCTCGCCGCCTTGAGCAACCAAGTCCGCTTTTTTAA AGCGATCGAAGACGTGGGCCTCACACCTCAACTGGAACTGCCGGCCACCACAGCATCCGCTATCCGCGAAGCCCTCGCCA CCCTTGCCGCCGCCGCCTGA
Upstream 100 bases:
>100_bases ACTACGTCTGCTGCACGGTAGATGCCGTCCTGCCGCCGGTTGTCTAGGATTGTGGACGGGGCGTTCCCTGCGCTCCAGGC CATTCGCAGGCGGGTGGACC
Downstream 100 bases:
>100_bases GCAACGGTTTTCCCTGGCACCTGGTGTTGCACGACAATCTGTGGGGCGAGAGGTGGAACCCCCTTCGGGTTCCCCTCTCG CGCTCTCCTCCTCCCCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MVEAAVLFQPPGFVRKSAFSSSGRINYYESCPAANPTAKTMVFLHGFGGGSSSYEWSKVYPAFAADYRVLAPDLPGWGFS EHRDSEYGKEDYLRAIGEFLADVASGRAIVIASSVVAALTLRLSTEQPEYFEAIVAMNPSGLSDFGKPYDGSFFGFVGNL PGINQFVYSQLITTTGGIRDFLRRSLFVRENRISEEIVDAYHASASEPNGQYAAYSFLKGNFSFDLAEWMPRLTVPVAIL WGAQSKYASPDTGERLAALSNQVRFFKAIEDVGLTPQLELPATTASAIREALATLAAAA
Sequences:
>Translated_299_residues MVEAAVLFQPPGFVRKSAFSSSGRINYYESCPAANPTAKTMVFLHGFGGGSSSYEWSKVYPAFAADYRVLAPDLPGWGFS EHRDSEYGKEDYLRAIGEFLADVASGRAIVIASSVVAALTLRLSTEQPEYFEAIVAMNPSGLSDFGKPYDGSFFGFVGNL PGINQFVYSQLITTTGGIRDFLRRSLFVRENRISEEIVDAYHASASEPNGQYAAYSFLKGNFSFDLAEWMPRLTVPVAIL WGAQSKYASPDTGERLAALSNQVRFFKAIEDVGLTPQLELPATTASAIREALATLAAAA >Mature_299_residues MVEAAVLFQPPGFVRKSAFSSSGRINYYESCPAANPTAKTMVFLHGFGGGSSSYEWSKVYPAFAADYRVLAPDLPGWGFS EHRDSEYGKEDYLRAIGEFLADVASGRAIVIASSVVAALTLRLSTEQPEYFEAIVAMNPSGLSDFGKPYDGSFFGFVGNL PGINQFVYSQLITTTGGIRDFLRRSLFVRENRISEEIVDAYHASASEPNGQYAAYSFLKGNFSFDLAEWMPRLTVPVAIL WGAQSKYASPDTGERLAALSNQVRFFKAIEDVGLTPQLELPATTASAIREALATLAAAA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dmpD/todF/xylF esterase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 32475; Mature: 32475
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEAAVLFQPPGFVRKSAFSSSGRINYYESCPAANPTAKTMVFLHGFGGGSSSYEWSKVY CCCEEEEECCCCHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCCCCHHHCC PAFAADYRVLAPDLPGWGFSEHRDSEYGKEDYLRAIGEFLADVASGRAIVIASSVVAALT CHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHH LRLSTEQPEYFEAIVAMNPSGLSDFGKPYDGSFFGFVGNLPGINQFVYSQLITTTGGIRD HHCCCCCCHHHHHHHEECCCCCHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCHHHH FLRRSLFVRENRISEEIVDAYHASASEPNGQYAAYSFLKGNFSFDLAEWMPRLTVPVAIL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEHHHHCCHHCCCEEEE WGAQSKYASPDTGERLAALSNQVRFFKAIEDVGLTPQLELPATTASAIREALATLAAAA ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVEAAVLFQPPGFVRKSAFSSSGRINYYESCPAANPTAKTMVFLHGFGGGSSSYEWSKVY CCCEEEEECCCCHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCCCCHHHCC PAFAADYRVLAPDLPGWGFSEHRDSEYGKEDYLRAIGEFLADVASGRAIVIASSVVAALT CHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHH LRLSTEQPEYFEAIVAMNPSGLSDFGKPYDGSFFGFVGNLPGINQFVYSQLITTTGGIRD HHCCCCCCHHHHHHHEECCCCCHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCHHHH FLRRSLFVRENRISEEIVDAYHASASEPNGQYAAYSFLKGNFSFDLAEWMPRLTVPVAIL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEHHHHCCHHCCCEEEE WGAQSKYASPDTGERLAALSNQVRFFKAIEDVGLTPQLELPATTASAIREALATLAAAA ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]